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JAL-3066 Fix NullPointerException thrown when showing HMMER run dialog
2021-01-12
Ben Soares
JAL-3789 Use j2s.config.altfileproperty in .j2s for...
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2021-01-12
Ben Soares
JAL-3789 New swingjs for Java2Script 3.2.10 with j2s...
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2020-09-25
Ben Soares
JAL-3577 Removed default JALVIEW_VERSION from gradle...
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2020-09-24
Ben Soares
JAL-3577 Quick fix adding quotation marks for findProperty...
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2020-09-11
Ben Soares
JAL-3679 Added externally specified plugins dir to...
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2020-06-15
soares
JAL-3658 Now only making cores from utils/jalviewjs...
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2020-06-12
soares
JAL-3446 fixing a bad merge, sorry
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2020-06-12
soares
JAL-3446 separated out potential exceptions for simplified...
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2020-06-08
soares
JAL-3446 old j8lib Jmol-14.29.17.jar removed. SHOULD...
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2020-06-08
soares
JAL-3446 new Jmol 15.1.3 jar added to j11lib, old j11lib...
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2020-06-04
Ben Soares
JAL-3225 Minor change to building.md for flexmark,...
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2020-06-04
Ben Soares
JAL-3225 Removed dependency on command line pandoc...
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2020-06-02
Ben Soares
JAL-3225 some fixes to build.gradle for working in...
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2020-06-01
soares
JAL-3225 small fixes for building within Eclipse
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2020-05-28
soares
Merge branch 'Jalview-JS/develop' of https://source...
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2020-05-28
soares
Merge branch 'develop' into Jalview-JS/develop
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2020-05-27
Ben Soares
JAL-3541 ensure deletion of cloverReportDir
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2020-05-27
Ben Soares
JAL-3541 small fix for clover.xml location expected...
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2020-05-26
soares
Merge branch 'bug/JAL-3541_cloverReport_gradle_task_fails...
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2020-05-26
soares
JAL-3541 added a property/variable style comment to...
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2020-05-25
soares
JAL-3541 selectively merged build.gradle and gradle...
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2020-05-15
Ben Soares
JAL-3541 Fixed report path for build artifacts
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2020-05-14
Ben Soares
JAL-3541 Added mem setting and jvmArgs for cloverReporting
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2020-05-14
Ben Soares
JAL-3541 Individual tests now instrumented and reported...
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2020-05-12
Ben Soares
JAL-3541 Helpers for running tests, and other commands...
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2020-05-12
Ben Soares
JAL-3541 JavaExec tasks for cloverInstr and cloverReport...
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2020-04-22
soares
JAL-3225 save auto formatting settings in org.eclipse...
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2020-04-21
Ben Soares
JAL-3577 changed default RELEASE dir in build.gradle...
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2020-04-21
Ben Soares
JAL-3577 Added newer install dirs to the deletion list...
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2020-04-21
Ben Soares
JAL-3602 Added configuration for enforced use of UTF...
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2020-04-09
Ben Soares
JAL-3588 Remove Examples folder in windows Program...
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2020-04-07
soares
merge from develop: the fixy bit
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2020-04-07
soares
merge from develop: the rest of the changes
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2020-04-07
soares
merge from develop: Most of the changes
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2020-04-07
Ben Soares
JAL-3577 improvement to non-release DMG background...
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2020-04-07
Ben Soares
Merge branch 'task/JAL-3577_Jalview_Test_installers...
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2020-04-07
Ben Soares
JAL-3577 Added DEVELOP DMG styling. Improved TEST-RELEASE...
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2020-04-06
Ben Soares
JAL-3577 Fixed Jalview Programme Group in Windows menu...
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2020-04-06
Ben Soares
JAL-3577 Moved application Categories for freedesktop...
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2020-04-06
Ben Soares
JAL-3577 removed debugging
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2020-04-06
Ben Soares
Merge branch 'task/JAL-3577_Jalview_Test_installers...
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2020-04-06
Ben Soares
JAL-3577 Added existing and new Application IDs for...
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2020-04-06
Ben Soares
JAL-3577 Changed shortName to INTERNAL_ID
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2020-04-05
Ben Soares
JAL-3577 Changed Windows internal ID to a new value...
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2020-04-05
Ben Soares
JAL-3577 Changed Windows internal ID to a new value...
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2020-04-04
Ben Soares
JAL-3577 Added DS_Store for Test release to look like...
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2020-04-03
Ben Soares
JAL-3577 Added a jalviewt scheme ONLY to TEST-RELEASE...
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2020-04-03
Ben Soares
JAL-3577 cleaned up old DMG files. Added NON-RELEASE...
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2020-04-02
Ben Soares
JAL-3577 First attempt at new folder names
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2020-04-02
Ben Soares
JAL-3572 Added getdown Implementation-Version to getdown...
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2020-04-02
Ben Soares
Merge branch 'improvement/JAL-3394_added_categories_to_unix_...
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2020-04-01
soares
JAL-3438 Added spotless task to use the utils/eclipse...
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2020-04-01
soares
JAL-3225 tasks to create extra desired settings for...
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2020-04-01
soares
Merge branch 'Jalview-JS/develop' of https://source...
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2020-03-31
soares
JAL-3248 quick fix to not remove doc/building.html...
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2020-03-30
soares
JAL-3393 Don't need PDF file using Illustrator. Replaced...
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2020-03-30
soares
JAL-3210 merged from develop: build.gradle and gradle...
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2020-03-27
soares
JAL-3225 updated essential files for eclipse project...
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2020-03-27
soares
JAL-3225 updated essential files for eclipse project...
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2020-03-26
Ben Soares
JAL-3225 Also look for local.properties in file named...
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2020-03-26
soares
JAL-3225 This one file needed for project if git clean...
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2020-03-26
soares
JAL-3225 This one file needed for project if git clean...
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2020-03-26
soares
JAL-3225 fix comparing Eclispe IDE j2s plugin and this...
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2020-03-26
Ben Soares
JAL-3225 All of .settings now gitignored. org.eclipse...
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2020-03-26
Ben Soares
JAL-3225 All of .settings now gitignored. org.eclipse...
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2020-03-25
Ben Soares
JAL-3248 Added instructions for downloading and configuring...
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2020-03-25
soares
JAL-3210 fix an undefined copyPlugin var and improved...
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2020-03-25
soares
JAL-3210 Fixed Eclipse IDE usage
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2020-03-24
soares
JAL-3210 New site-resources dir too
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2020-03-24
soares
JAL-3210 New version of swingjs and supporting .zip...
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2020-03-24
soares
JAL-3210 adjustment to build.gradle, gradle.properties...
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2020-03-19
Ben Soares
JAL-3541 increase maxheapsize for test worker process
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2020-03-19
Ben Soares
JAL-3541 tidying build.gradle, delete cloverInstrDir...
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2020-03-19
Ben Soares
JAL-3541 put org.gradle.jvmargs explicitly into gradle...
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2020-03-18
Ben Soares
JAL-3541 merged cleanClover with develop
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2020-03-18
Ben Soares
JAL-3541 perhaps a better clean for clover. fixed
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2020-03-18
Ben Soares
JAL-3541 perhaps a better clean for clover
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2020-03-17
Ben Soares
JAL-3541 rejigged clover tasks very mildly
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2020-03-17
Ben Soares
Revert "JAL-3541 trying out previous cloverReport task"
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2020-03-17
Ben Soares
JAL-3541 trying out previous cloverReport task
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2020-03-12
Ben Soares
Merge commit '3fe5792cc63d53a5ace952bd68d3bb673c97f588...
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2020-03-12
Ben Soares
JAL-3394 updated version if install4j gradle plugin
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2020-03-12
Ben Soares
Merge branch 'develop' into improvement/JAL-3394_added_categ...
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2020-03-09
Ben Soares
JAL-3227 slightly adapted download_jres.sh to make...
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2020-03-09
Ben Soares
JAL-3394 Made Categories line configurable/readable...
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2020-03-06
Ben Soares
JAL-3394 Added Categories=Science;Biology;Java; to...
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2020-03-06
Ben Soares
JAL-3394 getdown jar files had not been re-compiled
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2020-03-06
Ben Soares
JAL-3529 improved regex in Stockholm UNIPROT accession...
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2020-03-04
Ben Soares
JAL-3468 small tidy
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2020-03-04
Ben Soares
JAL-3468 improvement to feature description truncation...
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2020-03-04
Ben Soares
JAL-3468 Fixed tests and added test for max-length...
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2020-03-04
Ben Soares
JAL-3468 Obsessively fixed self-closing <br/> tags
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2020-03-03
soares
JAL-3468 Adapted methods to report how many features...
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2020-02-27
Ben Soares
JAL-3543 remove debugging output
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2020-02-27
Ben Soares
Merge branch 'develop' into improvement/JAL-3543_dont_report...
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2020-02-27
Ben Soares
JAL-3543 Conditional reporting of Install4j and Getdown...
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2020-02-19
Ben Soares
Merge branch 'develop' into improvement/JAL-3449_add_install...
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2020-02-19
Ben Soares
JAL-3289 Improved the name of the channel_launch.jvl...
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2020-02-19
Ben Soares
Merge branch 'develop' of https://source.jalview.org...
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2020-02-19
Ben Soares
JAL-3337 Adding .settings/org.eclipse.jdt.core.jalview...
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