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JAL-629 Add --renderer arg/subval for vector output and fixed annotation renderer...
2022-11-13
Ben Soares
JAL-4019 small but important corrections to array order...
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2022-11-13
Ben Soares
JAL-4019 Added tests for new Nucleotide sequence detection
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2022-11-13
Ben Soares
JAL-4019 improvement to short sequence nucleotide detection...
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2022-11-10
Ben Soares
JAL-4019 Nucleotide Ambiguity Colour Scheme added....
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2022-11-09
Ben Soares
JAL-3416 Add necessary logo to non-internal Frames
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2022-11-09
Ben Soares
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE...
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2022-11-09
Ben Soares
JAL-3416 Add necessary logo to non-internal Frames
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2022-11-09
Ben Soares
Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE...
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2022-11-09
Ben Soares
JAL-3416 Remove all JFrame/JInternalFrame icons (set...
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2022-11-09
Ben Soares
Merge branch 'bug/JAL-1988_JAL-3772_improved_quit_handling...
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2022-11-09
Ben Soares
JAL-1988 JAL-3772 Test for FORCE_QUIT whilst saving...
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2022-11-08
Ben Soares
Merge branch 'bug/JAL-1988_JAL-3772_improved_quit_handling...
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2022-11-08
Ben Soares
JAL-1988 JAL-3776 Formatting JvOptionPane
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2022-11-08
Ben Soares
JAL-1988 JAL-3772 Tests for various quitting scenarios
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2022-11-08
Ben Soares
JAL-1988 JAL-3772 Fixes highlighted by tests
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2022-11-04
Ben Soares
Merge branch 'merge/JAL-4054+JAL-4064' into ben-big...
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2022-11-04
Ben Soares
JAL-3416 Added logoIcon to quit (and potentially other...
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2022-11-04
Ben Soares
JAL-1998 JAL-3772 JAL-3416 Merge conflict resolution...
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2022-11-04
Ben Soares
JAL-4064 JAL-4054 Combined install4j10 template with...
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2022-11-04
Ben Soares
JAL-4054 Altered file association templates and generated...
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2022-11-03
Ben Soares
JAL-3416 File Chooser iconified, JvOptionPanes iconified...
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2022-11-03
Ben Soares
JAL-1988 JAL-3772 Allow other window closing dialogs...
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2022-11-03
Ben Soares
JAL-3416 More JInternalFrame icons
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2022-11-03
Ben Soares
JAL-1988 JAL-3772 Tidying of unspecified Callable declaratio...
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2022-11-03
Ben Soares
JAL-3416 Start to add JInternalFrame icons (to replace...
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2022-11-02
Ben Soares
JAL-1988 JAL-3772 Moving packages to somewhere more...
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2022-11-01
Ben Soares
JAL-3416 set flatlaf default drag mode to LIVE_DRAG_MODE
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2022-11-01
Ben Soares
JAL-1988 JAL-3772 Change default alignmentviewport...
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2022-11-01
Ben Soares
JAL-4064 tidying build.gradle
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2022-11-01
Ben Soares
JAL-4064 re-added bundled macOS JREs as Filesets, which...
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2022-11-01
Ben Soares
JAL-4064 Cleaned up file sets in install4j template...
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2022-11-01
Ben Soares
JAL-4064 Download JRE/JDKs from Azul if not os/arch...
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2022-10-29
Ben Soares
JAL-1988 JAL-3772 removed a debugging log line
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2022-10-28
Ben Soares
JAL-1988 JAL-3772 Removed 'Wait' button from waitDialog...
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2022-10-28
Ben Soares
JAL-1988 JAL-3772 Fixed wait between waitDialog appearances...
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2022-10-27
Ben Soares
JAL-1988 Allow generic Container object in JvOptionPane...
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2022-10-27
Ben Soares
Merge branch 'develop' into bug/JAL-1988_JAL-3772_improved_q...
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2022-10-27
Ben Soares
JAL-4083 don't need globalUseScriptWait after all,...
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2022-10-27
Ben Soares
JAL-4083 only set globalUseScriptWait if needed
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2022-10-27
Ben Soares
JAL-4083 Use jmolViewer.scriptWait instead of jmolViewer...
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2022-10-26
Ben Soares
Merge branch 'features/r2_11_2_alphafold/JAL-2349_JAL...
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2022-10-26
Ben Soares
JAL-3416 (and others) increasing number of STDERR lines...
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2022-10-25
Ben Soares
JAL-3416 Making FlatLaF default for macs due to a problem...
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2022-10-24
Ben Soares
JAL-1988 JAL-3772 wait timer working first time but...
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2022-10-24
Ben Soares
JAL-1988 JAL-3772 Non-blocking modal dialogs for unsaved...
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2022-10-11
Ben Soares
JAL-4014 Changed gecos display names to match labels...
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2022-09-29
Ben Soares
Merge branch 'develop' into bug/JAL-1988_JAL-3772_improved_q...
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2022-09-26
Ben Soares
JAL-1988 JAL-3772 linked undostack to saved changes...
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2022-09-26
Ben Soares
JAL-1988 better wording for quit dialog
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2022-09-23
Ben Soares
JAL-1988 JAL-3772 Quit confirmation dialog boxes with...
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2022-09-23
Ben Soares
JAL-3676 extra information about jalview_properties...
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2022-09-23
Ben Soares
JAL-1988 property based fake delay whilst saving project...
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2022-08-23
Ben Soares
JAL-4014 JAL-4063 Added gecos colourScheme names (INFO...
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2022-07-26
Ben Soares
JAL-4036 Fixed the virus_host_id query field
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2022-07-26
Ben Soares
JAL-4036 Added text to help about different number...
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2022-07-25
Ben Soares
JAL-4036 updated help about new UniProt API
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2022-07-25
Ben Soares
JAL-4036 moved a comment block
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2022-07-25
Ben Soares
JAL-4034 button looks better also on other OSes with...
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2022-07-22
Ben Soares
JAL-4036 Changes made from code review CR-JAL-265
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2022-07-22
Ben Soares
JAL-4036 Add getDbName to the GFTSPanelI and add an...
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2022-07-22
Ben Soares
JAL-4036 removing the query field code from the dropdown...
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2022-07-21
Ben Soares
JAL-4036 Don't autosearch changing index when autosearch...
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2022-07-21
Ben Soares
JAL-4036 add search fieldname to dropdown list
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2022-07-21
Ben Soares
JAL-4036 removed often duplicated pluralisation in...
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2022-07-21
Ben Soares
JAL-4036 New configuration, target and pagination process...
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2022-07-15
Ben Soares
JAL-4034 Use the new non-modal JDialog for 3DBeacons...
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2022-07-15
Ben Soares
JAL-4034 Allow request for non-modal JDialog, which...
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2022-07-12
Ben Soares
JAL-4034 change to jalview property name
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2022-07-12
Ben Soares
JAL-4034 showConfirmDialog works for both desktop and...
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2022-07-11
Ben Soares
JAL-4034 Non-blocking 3D Beacons query after warning...
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2022-07-11
Ben Soares
JAL-4034 allow a jalview_property to set the threshold...
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2022-06-28
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS_APQH...
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2022-06-28
Ben Soares
JAL-1988 Don't put Quit in the File menu if there's...
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2022-06-23
Ben Soares
Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS_APQH...
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2022-06-23
Ben Soares
JAL-1988 Check for setHandler capability to avoid About...
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2022-06-13
Ben Soares
JAL-1988 Hack to ensure Quit dialog box is moved to...
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2022-06-13
Ben Soares
JAL-4004 Fix missing whatsNew.html when not building...
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2022-06-07
Ben Soares
JAL-4020 class formatting
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2022-06-06
Ben Soares
JAL-4020 updated tests
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2022-06-06
Ben Soares
JAL-4020 class reformatting
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2022-05-12
Ben Soares
JAL-4014 4 gecos colour schemes added
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2022-04-27
Ben Soares
JAL-1544 version number typo, probably copy and paste
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2022-04-27
Ben Soares
JAL-3989 Populate template files for hugo build: archive...
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2022-04-25
Ben Soares
JAL-3989 moved getdown build dirs to build/website...
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2022-04-25
Ben Soares
JAL-3989 Independent creation of JSON installer sections
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2022-04-21
Ben Soares
Merge branch 'develop' into merge/JAL-3978+JAL-3553...
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2022-04-21
Ben Soares
Merge branch 'develop' into task/JAL-3991_check_actual_JAVA_...
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2022-04-06
Ben Soares
JAL-3991 Made info displayed only when needed (Java...
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2022-04-06
Ben Soares
JAL-3991 Added information output about the slightly...
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2022-04-06
Ben Soares
JAL-3991 JAVA_COMPILE_VERSION put into build_properties...
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2022-04-05
Ben Soares
JAL-3989 slight refactor of build.gradle, add more...
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2022-04-04
Ben Soares
JAL-3989 fix a build date once in build.gradle, not...
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2022-03-31
Ben Soares
Merge branch 'task/JAL-3553_improved_install4j_output_txt...
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2022-03-31
Ben Soares
Merge branch 'develop' into improvement/JAL-3978_add_gradle_...
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2022-03-30
Ben Soares
JAL-360 JAL-3975 make AlignFrame the parent of FeatureEditor...
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2022-03-21
Ben Soares
JAL-3416 Updated FlatLaF to 2.1
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2022-03-18
Ben Soares
JAL-3978 Using getdowninstanceappdir and getdowninstanceappb...
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2022-03-18
Ben Soares
JAL-3978 Getdown add getdownappbase property to launched...
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2022-03-18
Ben Soares
JAL-3978 New tasks to build archive 'old' dir with...
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2022-03-16
Ben Soares
JAL-3978 task stub and getdown splash screens
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