| 2006-10-27 |
amwaterhouse | If sequence is null, dont add it
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | New padgaps works out number of gaps to insert, delete
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | Rename old properties file before writing new
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | Focus listener on Tabbed pane, gives keyboard focus...
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Only adds history item if size>0
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Returns number of columns deleted
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Remove system.out
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | void changeCase(ActionEvent e
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | set quality to null if removed
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | showConservation, quality, identity not used
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Dont readd the undo
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | check command.string[i] is not null
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commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Sequence length maybe less than end
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Error message changed
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Sequences may be hidden, not in this aligment
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Invert accelerators
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | sequence may be null if hidden or deleted
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Set alignFrame of gathered panels to be the source...
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commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | remove gaps size range
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | No need to reduce length if inserting more gaps at...
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commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Check if hiddenSequence has been deleted
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Known bugs fixed
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Dont scroll off width-1
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | We can delete sequence 0
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Return if negative width, ie alignment deleted
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Check hiddenSequence before placing in tmp
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Get sequence in routine
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | viewport.hasHiddenColumns updated after undo/redo performed
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | EditCommand added to AlignFrame
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Adjusts columnSelection correctly
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Adjusts hiddenColumns correctly
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | more accelerators
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Only send one call per sequence at the moment
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | ShowConservation, quality, identity not used
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Must set alignIndex before delete takes place
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Use EditCommand.Cut
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | HistoryItem replaced by CommandI
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | EditCommand implemented
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | must translate graphics back the same amountcvs diff...
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Change Case is undoable
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | SequenceIndex might be beyond old height
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Must catch image outOfMemoryError
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | changeCase, removeGaps moved to commands package
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | maxIdLength redundant, deleteCols, trimLeft, removeGaps...
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Uses RemoveGapsCommand
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Remove variables not used
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Remove unneccessary import
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Make everything final
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | New accelerators
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Commented out for compilation
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | setOrder is public
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Commands which can be done, or undone
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Its historycvs remove jalview/datamodel/HistoryItem...
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Wait for response from server before next sequence
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | showqual, showcons never used
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | remove html and body from tooltip
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | new feature args
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Can set description for new features
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Faded anntotations when recalculating
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | set conserve and quality null if outofmemory
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | No longer a FeatureListener
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | parseDescriptionHTML
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | draw text after linkimage
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Remove system.out
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Gerneral XML parse error
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | showQuality may be updated during archive file load
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Convenient function findEndRes
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Add features from Popupmenu
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Overview may request index beyond alignment height
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Use i, not index if not representedSeqs
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | If conservation is null, disable Blosum62 and conservation...
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Annotasiont[j] might be null
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Local adjustForhiddenSeqs routine
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | RepresentGroup count items
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Null element checked
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | HiddenSequences now array, not hashtable
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Comment out debug to compile applet
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | No need to find index when deleting
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Calculate alWidth earlier
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Remove growing hashtable
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Check on null consensus
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Must repaint whole alignPanel
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | MaxResidue must be at least 2
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Remove unneccessary separator
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Only getGroups once if groupEditingcvs update
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | 1.1 compatible
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Use AAFrequency final keys
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | SetTooltip empty
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Optimized
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | aaIndex replaces aaHash
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | static final strings for consensus keys
|
commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Consensus and conservation updated in threads
|
commit | commitdiff | tree |
| 2006-10-06 |
amwaterhouse | AAFrequency optimized
|
commit | commitdiff | tree |
| 2006-10-06 |
amwaterhouse | Set consensus as hashtble[]
|
commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | Multiple Views
|
commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | BatchSize now 10
|
commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | OutOfMemoryError test
|
commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | TabbedPanes for views
|
commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | lower case available
|
commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | AlignFrame must take width and height
|
commit | commitdiff | tree |
| next |
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