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Merge branch 'develop' into alpha/JAL-3362_Jalview_212_alpha
2020-02-12
Jim Procter
JAL-3187 view controller UI api method to show feature...
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2020-02-12
Jim Procter
JAL-3187 convenience method on SplitContainerI to retrieve...
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2020-02-12
Jim Procter
JAL-1354 JAL-3528 report missing keys for MessageManager...
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2020-02-12
Jim Procter
JAL-3407 release notes for JAL-3121
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2020-02-11
Jim Procter
JAL-3407 release notes for JAL-3375
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2020-02-11
Jim Procter
JAL-3376 highlighted in what’s new
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2020-02-11
Jim Procter
JAL-3407 - JAL-3376 JAL-3377 release notes
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2020-02-11
Jim Procter
JAL-3407 start of whats new for 2.11.1.0
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2020-02-11
Jim Procter
JAL-3376 documentation for standard attributes for...
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2020-02-11
Jim Procter
JAL-3407 release notes (JAL-3386 signoff, new-knowns...
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2020-02-11
Jim Procter
JAL-3407 JAL-3508 move to 2.11.1.0 point release versioning...
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2020-02-03
Jim Procter
Merge branch 'task/JAL-3510-update-clover-to-4.4.1...
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2020-02-03
Jim Procter
JAL-3510 JAL-3153 clover instrumentation for tests
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2020-01-30
Jim Procter
JAL-3510 bump clover version in gradle build dependencies
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2020-01-16
Jim Procter
Merge branch 'improvement/JAL-3449_add_install4j_installer_g...
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2020-01-16
Jim Procter
JAL-3474 release notes
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2020-01-16
Jim Procter
Merge branch 'improvement/JAL-3474_lots_of_.cvsignore_files...
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2019-12-12
Jim Procter
JAL-2305 moved failing CrossRef tests to Functional_Failing...
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2019-12-12
Jim Procter
JAL-3407 update release date for Jalview 2.11.1
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2019-10-15
Jim Procter
JAL-3407 update release date for Jalview 2.11.1
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2019-10-11
Jim Procter
Merge branch 'develop' into documentation/JAL-3407_2...
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2019-10-10
Jim Procter
JAL-3070 set calcId and autocalculated flags for annotation...
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2019-10-10
Jim Procter
Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
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2019-10-10
Jim Procter
JAL-3070 registerWorker start its thread automatically...
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2019-10-10
Jim Procter
JAL-3070 use object identity equivalence for lists...
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2019-10-07
Jim Procter
Revert "JAL-3070 JAL-3066 fix initialisation of slivka...
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2019-10-07
Jim Procter
JAL-3066 report job ID when submitted
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2019-10-07
Jim Procter
JAL-3066 debug info: check response when adding features...
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2019-10-07
Jim Procter
JAL-3066 JAL-3070 AACon: pass the name of the service...
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2019-10-07
Jim Procter
JAL-3066 hack to instantiate the correct client according...
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2019-10-07
Jim Procter
JAL-3070 jaba/slivka independent tests for disorder...
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2019-10-07
Jim Procter
JAL-3070 JAL-3066 provide standard concrete instances...
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2019-10-07
Jim Procter
JAL-3070 JAL-3066 fix initialisation of slivka ServiceWithPa...
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2019-10-07
Jim Procter
JAL-3070 use identity equivalence for workers rather...
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2019-10-07
Jim Procter
JAL-3070 formatting
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2019-10-03
Jim Procter
JAL-3070 reinstate the internal test service URL for...
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2019-10-03
Jim Procter
JAL-3070 test jabaws and slivka AACon service functionality
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2019-10-03
Jim Procter
JAL-3070 slivka service discovery as a background thread...
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2019-10-03
Jim Procter
JAL-3070 basic AACon service functionality test
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2019-10-03
Jim Procter
JAL-3070 alignment analysis service worker UI and settings...
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2019-10-03
Jim Procter
JAL-3070 call checkDone() ASAP to avoid race condition...
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2019-10-02
Jim Procter
JAL-3070 decouple WsMenuEntryProviderI code from JABAWS
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2019-10-02
Jim Procter
JAL-3070 reorganise prior to refactor
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2019-10-02
Jim Procter
JAL-3070 make AlignCalcUI service code work only with...
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2019-10-02
Jim Procter
JAL-3070 discoverers return ServiceWithParameter, now...
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2019-10-02
Jim Procter
JAL-3070 decontaminate the ‘preferred service’ methods...
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2019-10-02
Jim Procter
JAL-3070 JAL-3062 tidy up slivka ws menu builder and...
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2019-10-02
Jim Procter
JAL-3070 detect failed/broken annotation web service...
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2019-10-02
Jim Procter
JAL-3070 pull up generic methods for an automatic alignment...
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2019-10-02
Jim Procter
JAL-3070 TODO
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2019-09-26
Jim Procter
JAL-3070 oops - refactor Slivka’s service stub too :)
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2019-09-26
Jim Procter
JAL-3070 JAL-3066 JAL-3067 refactor annotation web...
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2019-09-26
Jim Procter
JAL-3070 JAL-3066 JAL-2808 allow feature filter definition...
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2019-09-26
Jim Procter
JAL-3070 allow SequenceI.findPositions(0,column+1)...
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2019-09-26
Jim Procter
JAL-3070 cope when dataset sequence is passed
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2019-09-26
Jim Procter
JAL-3070 JAL-3066 formatting
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2019-09-26
Jim Procter
JAL-3070 JAL-3066 AlignmentI.findOrAddAnnotation(AlignmentAn...
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2019-09-24
Jim Procter
JAL-3070 tidying
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2019-09-23
Jim Procter
JAL-3066 JAL-3070 pull up non-jabaws specific service...
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2019-09-23
Jim Procter
Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
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2019-09-23
Jim Procter
JAL-3070 configure annotation service manager from...
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2019-09-23
Jim Procter
JAL-3070 rename AbstractJabaCalcWorker to SeqAnnotationServi...
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2019-09-23
Jim Procter
JAL-3070 ensure RNAAliFold annotation rows display...
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2019-09-23
Jim Procter
JAL-3070 formatting
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2019-09-23
Jim Procter
JAL-3070 detect presence of existing JABA RNAAliFold...
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2019-09-23
Jim Procter
JAL-3070 match AbstractJabaCalcWorker’s annotation...
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2019-09-23
Jim Procter
JAL-3070 javadoc for (mostly) jabaws specific methods
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2019-09-20
Jim Procter
JAL-3070 rough-and-ready refactor of JABA SequenceAnnotation...
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2019-09-20
Jim Procter
JAL-3070 JAL-1379 deferred work on annotation based...
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2019-09-20
Jim Procter
JAL-3070 JAL-2507 fix up test output and honour the...
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2019-09-17
Jim Procter
JAL-3432 hide the slider when validator has no min...
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2019-09-06
Jim Procter
JAL-3066 fix compile error (@matesuz - this will conflict...
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2019-09-06
Jim Procter
JAL_1426 JAL-3066 update Apache James mime parser and...
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2019-08-13
Jim Procter
JAL-3362 keep Java 1.8 build happy by specifying generic...
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2019-08-13
Jim Procter
Merge branch 'alpha/JAL-3362_Jalview_212_alpha' into...
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2019-08-12
Jim Procter
JAL-2987 release notes
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2019-08-12
Jim Procter
JAL-3407 update RELEASE and cut new release notes in...
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2019-08-12
Jim Procter
JAL-3407 JAL-3406 update credits in Jalview 2.11.1
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2019-07-15
Jim Procter
Merge branch 'merge/JAL-3285_mchmmer_with_211_develop...
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2019-07-11
Jim Procter
Merge branch 'merge/JAL-3285_mchmmer_with_211_develop...
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2019-07-10
Jim Procter
JAL-3070 standard way of storing/recovering documentation...
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2019-07-10
Jim Procter
JAL-3070 remove final reference to Jws2Instance
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2019-07-10
Jim Procter
Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
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2019-07-10
Jim Procter
JAL-3289 bamboo properties for ‘BUILD’ getdown channel...
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2019-07-10
Jim Procter
JAL-3289 bamboo properties for ‘BUILD’ getdown channel
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2019-07-10
Jim Procter
JAL-3289 bamboo properties for ‘BUILD’ getdown channel...
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2019-07-10
Jim Procter
JAL-3289 bamboo properties for ‘BUILD’ getdown channel
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2019-07-10
Jim Procter
Merge branch 'merge/JAL-3285_mchmmer_with_211_develop...
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2019-07-04
Jim Procter
JAL-3111 correct JVL appbase for 2.10.5 via getdown
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2019-07-04
Jim Procter
Merge branch 'task/JAL-3337-rm-lib-update-sourceDist...
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2019-07-04
Jim Procter
Merge branch 'develop' of http://source.jalview.org...
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2019-07-04
Jim Procter
JAL-3337 round-and-round the process source files again
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2019-07-04
Jim Procter
JAL-3337 more includes and excludes
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2019-07-04
Jim Procter
JAL-3337 remove the old lib directory !
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2019-07-04
Jim Procter
JAL-3337 rejig the source distribution generation to...
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2019-07-04
Jim Procter
JAL-3111 replace year in header for help pages and...
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2019-07-04
Jim Procter
Merge branch 'task/JAL-3348_document_cli_memory_settings_whe...
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2019-07-04
Jim Procter
JAL-3111 JAL-3348 JVL file documentation
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2019-07-04
Jim Procter
JAL-3348 revised bsoares memory settings documentation...
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2019-07-03
Jim Procter
JAL-3111 tidy up lists/indentation for release notes
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