git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-974 skip empty rows
2012-08-29 jprocterJAL-974 skip empty rows
 commit | commitdiff | tree
2012-08-29 jprocterJAL-974 set GlobPlot raw/smooth score annotation rows...
commit | commitdiff | tree
2012-08-29 jprocterformatting
 commit | commitdiff | tree
2012-08-29 jprocterJAL-1153 JAL-1155 improved layout and allowed labels...
commit | commitdiff | tree
2012-08-29 jprocterJAL-1153 new runtime property set to first non-null...
commit | commitdiff | tree
2012-08-29 jprocterJAL-48 patch NPE when encountering an alignment window...
commit | commitdiff | tree
2012-08-28 jprocterremove contaminant imports
 commit | commitdiff | tree
2012-08-28 jprocterremove contaminant imports
 commit | commitdiff | tree
2012-08-28 jprocterJAL-676 JAL-1001 - simple menu item to access documentation...
commit | commitdiff | tree
2012-08-28 jprocterformatting
 commit | commitdiff | tree
2012-08-28 jprocterJAL-1066 basic gui and functionality for per-sequence...
commit | commitdiff | tree
2012-08-28 jprocterJAL-1066 - per-sequence colouring with sequence associated...
commit | commitdiff | tree
2012-08-28 jprocterformatting
 commit | commitdiff | tree
2012-08-28 jprocterJAL-1145 patch: sequence associated annotation with...
commit | commitdiff | tree
2012-08-28 jprocterJAL-974 create mixture of sequence features marking...
commit | commitdiff | tree
2012-08-28 jprocterJAL-974 refactored creation of Annotation rows from...
commit | commitdiff | tree
2012-08-28 jprocterJAL-974 JAL-975 try to cope with temporary server errors...
commit | commitdiff | tree
2012-08-28 jprocterJAL-1136 sometimes there are no parameters associated...
commit | commitdiff | tree
2012-08-28 jprocterJAL-1001 - hack to extract the global URL for a service...
commit | commitdiff | tree
2012-08-28 jprocterjavadoc and note about broken semantics for findIndex
 commit | commitdiff | tree
2012-08-28 jprocterJAL-1149 patch
 commit | commitdiff | tree
2012-08-28 jprocterJAL-1148 reinstate sequence references for annotation...
commit | commitdiff | tree
2012-08-24 jprocterJAL-1087 skip processing any of the other command line...
commit | commitdiff | tree
2012-08-24 jprocterJAL-1143 - ensure we revalidate annotation panel height...
commit | commitdiff | tree
2012-08-23 jprocterJAL-975 JAL-951 test class for viewing layout for JABAWS...
commit | commitdiff | tree
2012-08-07 jprocterJAL-1137 clean up old-style menu code and look
 commit | commitdiff | tree
2012-08-07 jprocterJAL-1137 JAL-975 simpler menu for the AACon service...
commit | commitdiff | tree
2012-08-07 jprocterDebug message associated with TODO for JAL-1136 - re...
commit | commitdiff | tree
2012-08-07 jprocterJAL-975 JAL-1137 debug messages for web service client...
commit | commitdiff | tree
2012-08-05 jprocterJAL-1131 - todos for later versions
 commit | commitdiff | tree
2012-08-05 jprocterJAL-1131 ensure new dataset sequence is created if...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 Ensure asynchronously calculated autoannotation...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 JAL-811 JAL-812 store/recover autocalc alignment...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 fix logic for recovering AACons params
 commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 store ws-parameter list as XML element content...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 allow parameter sets to be transferred across...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 less code-dependent formula for creating server...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 - fix abstraction for parameter container...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1115 reference to List<SequenceI> passed in 'alignment...
commit | commitdiff | tree
2012-08-02 jprocterJAL-976 better logging/error reporting for disorder...
commit | commitdiff | tree
2012-08-02 jprocterJAL-976 JAL-958 todo list for release
 commit | commitdiff | tree
2012-08-01 jprocterJAL-976 ensure protein disorder services appears in...
commit | commitdiff | tree
2012-08-01 jprocterJAL-976 don't clear menu out before adding jabaws services...
commit | commitdiff | tree
2012-08-01 jprocterJAL-1066 patch regression ac33424148b2a4de29b3ca43f941162e8b...
commit | commitdiff | tree
2012-07-08 jprocterdocumentation for PCA calculation parameters and reset...
commit | commitdiff | tree
2012-07-08 jproctera209409239 (JAL-976 - add support for storing service...
commit | commitdiff | tree
2012-07-08 jprocterJAL-976 clean out associated annotation
 commit | commitdiff | tree
2012-07-08 jprocterJAL-976 implement additional calcId method
 commit | commitdiff | tree
2012-07-08 jprocterJAL-976 simpler parameter update model
 commit | commitdiff | tree
2012-07-08 jprocterJAL-961 JAL-976 allow access to service URI for parameter...
commit | commitdiff | tree
2012-07-08 jprocterJAL-961 JAL-976 recover current settings from associated...
commit | commitdiff | tree
2012-07-08 jprocterJAL-976 pick an available instance of a service based...
commit | commitdiff | tree
2012-07-08 jprocterbugfix - use currently held parameters
 commit | commitdiff | tree
2012-07-08 jprocterJAL-976 - storing service parameters on the view model
 commit | commitdiff | tree
2012-07-06 jprocterJAL-976 test if the sliders have been modified from...
commit | commitdiff | tree
2012-07-06 jprocterunique URI for service type
 commit | commitdiff | tree
2012-07-06 jprocterJAL-961 JAL-976 abstracted container for dynamic calculation...
commit | commitdiff | tree
2012-07-06 jproctertidy imports
 commit | commitdiff | tree
2012-07-06 jprocterJAL-976 - add support for storing service parameter...
commit | commitdiff | tree
2012-07-03 jprocterJAL-961 allow calcId to be specified independently...
commit | commitdiff | tree
2012-07-03 jprocterJAL-974 - broken copy of feature settings
 commit | commitdiff | tree
2012-07-02 jprocterJAL-1129 progress bar - this patch doesn't provide...
commit | commitdiff | tree
2012-07-02 jprocterJAL-968 incremental - PNG/EPS output has annotation...
commit | commitdiff | tree
2012-07-02 jproctertidy imports
 commit | commitdiff | tree
2012-07-02 jprocterJAL-974 create graduated feature colours for annotation...
commit | commitdiff | tree
2012-07-02 jprocterJAL-974 - use refactored methods on AlignmentPanel
 commit | commitdiff | tree
2012-07-02 jprocterJAL-974 - refactor FeatureRenderer constructor to AlignmentP...
commit | commitdiff | tree
2012-07-01 jprocterJAL-1117 alleviate lock starvation
 commit | commitdiff | tree
2012-07-01 jprocterensure all annotation dependent rendering gets refreshed
 commit | commitdiff | tree
2012-06-29 jprocterJAL-1065 JAL-1066 ensure non-residue based schemes...
commit | commitdiff | tree
2012-06-29 jprocterJAL-1065 JAL-1066 allow different lookup tables for...
commit | commitdiff | tree
2012-06-26 jprocterJAL-899 added groovy support to develop branch
 commit | commitdiff | tree
2012-06-20 jprocterformatting
 commit | commitdiff | tree
2012-06-19 jprocterJAL-976 JAL-975 JAL-1119 - pass on any existing parameters...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 JAL-1119 - prototype adjustable AACons parameters...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 - doh! valid result if width matches *ungapped...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 - bespoke AACons settings object to save current...
commit | commitdiff | tree
2012-06-19 jprocterpatch for JAL-1172 ensure option's default value is...
commit | commitdiff | tree
2012-06-19 jprocterJAL-961 JAL-975 extend api to support removal of workers...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 - ensure we only submit ungapped, padded alignment...
commit | commitdiff | tree
2012-06-15 jprocterformatting
 commit | commitdiff | tree
2012-06-15 jprocterJAL-1125 option to switch between Jalview and SeqSpace...
commit | commitdiff | tree
2012-06-15 jprocterfix JAL-1122
 commit | commitdiff | tree
2012-06-15 jprocterJAL-1123 - make clear where off-by-one error was occuring...
commit | commitdiff | tree
2012-06-15 jprocterJAL-535 - refactored core PCA viewer code to viewmodel
 commit | commitdiff | tree
2012-06-15 jprocterJAL-535 refactored core code from PCA viewer to viewmodel.
 commit | commitdiff | tree
2012-06-15 jprocterJAL-1120 patch for desktop
 commit | commitdiff | tree
2012-06-15 jprocterpatch for JAL-1121 - reset button and slightly wider...
commit | commitdiff | tree
2012-06-15 jprocterJAL-535 refactoring todo
 commit | commitdiff | tree
2012-06-15 jprocterExtended IProgressIndicator with method to check if...
commit | commitdiff | tree
2012-06-15 jprocterMerge branch 'JAL-1013_pca_rna_dna' into develop
 commit | commitdiff | tree
2012-06-14 jprocterJAL-975 JAL-1002 ensure custom parameters are actually...
commit | commitdiff | tree
2012-06-14 jprocterJAL-1115 - synchronized access to group list
 commit | commitdiff | tree
2012-06-14 jprocterJAL-976 - make sure annotation panel is updated to...
commit | commitdiff | tree
2012-06-14 jprocterJAL-961 JAL-976 kill any existing AACon job if a new...
commit | commitdiff | tree
2012-06-14 jprocterJAL-1003 visual delay when running a sequence or alignment...
commit | commitdiff | tree
2012-06-14 jprocterJAL-961 JAL-976 tweaked way that AACons client is registered...
commit | commitdiff | tree
2012-06-14 jprocterformatting
 commit | commitdiff | tree
2012-06-14 jprocterformatting
 commit | commitdiff | tree
2012-06-14 jprocterJAL-1118 - hack to try and get rid of flicker. consider...
commit | commitdiff | tree
next