| 2006-11-03 |
amwaterhouse | Alignpanel is not new if copied from j2xml
|
commit | commitdiff | tree |
| 2006-11-03 |
amwaterhouse | Consensus may already have been removed
|
commit | commitdiff | tree |
| 2006-11-03 |
amwaterhouse | Remove unnecessary refresh
|
commit | commitdiff | tree |
| 2006-11-03 |
amwaterhouse | Use Jalview2XML to copy AlignmentPanel
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | return if image is null
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | Update editMenuBar after alignment changed
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | Set menu state in alignFrame
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | Fire align change for case change
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | History is per viewport
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | selected states set in updateMenusFromViewport
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | Use system path separator char
|
commit | commitdiff | tree |
| 2006-11-02 |
amwaterhouse | dasregistry is now dasregistry.org
|
commit | commitdiff | tree |
| 2006-10-30 |
amwaterhouse | Fix for feature name amended
|
commit | commitdiff | tree |
| 2006-10-30 |
amwaterhouse | shift I to inverse sequence selection
|
commit | commitdiff | tree |
| 2006-10-30 |
amwaterhouse | Append html
|
commit | commitdiff | tree |
| 2006-10-30 |
amwaterhouse | Update features
|
commit | commitdiff | tree |
| 2006-10-30 |
amwaterhouse | conservation lock
|
commit | commitdiff | tree |
| 2006-10-30 |
amwaterhouse | deleteSequenceFeature
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | Remove consensus annotation if out of memory
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | updatingConsensus, updatingConservation is static ...
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | PaintRefresher can calculate seqs added or removed
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | Dont remove or add PaintRefresher registrations for...
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | -1 error
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | Reset colour schemes and alignmentChanged moved to...
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | If sequence is null, dont add it
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | New padgaps works out number of gaps to insert, delete
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | Rename old properties file before writing new
|
commit | commitdiff | tree |
| 2006-10-27 |
amwaterhouse | Focus listener on Tabbed pane, gives keyboard focus...
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Only adds history item if size>0
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Returns number of columns deleted
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Remove system.out
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | void changeCase(ActionEvent e
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | set quality to null if removed
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | showConservation, quality, identity not used
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Dont readd the undo
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | check command.string[i] is not null
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Sequence length maybe less than end
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Error message changed
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Sequences may be hidden, not in this aligment
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Invert accelerators
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | sequence may be null if hidden or deleted
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Set alignFrame of gathered panels to be the source...
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | remove gaps size range
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | No need to reduce length if inserting more gaps at...
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Check if hiddenSequence has been deleted
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Known bugs fixed
|
commit | commitdiff | tree |
| 2006-10-26 |
amwaterhouse | Dont scroll off width-1
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | We can delete sequence 0
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Return if negative width, ie alignment deleted
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Check hiddenSequence before placing in tmp
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Get sequence in routine
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | viewport.hasHiddenColumns updated after undo/redo performed
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | EditCommand added to AlignFrame
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Adjusts columnSelection correctly
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | Adjusts hiddenColumns correctly
|
commit | commitdiff | tree |
| 2006-10-25 |
amwaterhouse | more accelerators
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Only send one call per sequence at the moment
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | ShowConservation, quality, identity not used
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Must set alignIndex before delete takes place
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Use EditCommand.Cut
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | HistoryItem replaced by CommandI
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | EditCommand implemented
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | must translate graphics back the same amountcvs diff...
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Change Case is undoable
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | SequenceIndex might be beyond old height
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Must catch image outOfMemoryError
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | changeCase, removeGaps moved to commands package
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | maxIdLength redundant, deleteCols, trimLeft, removeGaps...
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Uses RemoveGapsCommand
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Remove variables not used
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Remove unneccessary import
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Make everything final
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | New accelerators
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Commented out for compilation
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | setOrder is public
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Commands which can be done, or undone
|
commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Its historycvs remove jalview/datamodel/HistoryItem...
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Wait for response from server before next sequence
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | showqual, showcons never used
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | remove html and body from tooltip
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | new feature args
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Can set description for new features
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Faded anntotations when recalculating
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | set conserve and quality null if outofmemory
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | No longer a FeatureListener
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | parseDescriptionHTML
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | draw text after linkimage
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Remove system.out
|
commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Gerneral XML parse error
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | showQuality may be updated during archive file load
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Convenient function findEndRes
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Add features from Popupmenu
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Overview may request index beyond alignment height
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Use i, not index if not representedSeqs
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | If conservation is null, disable Blosum62 and conservation...
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Annotasiont[j] might be null
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Local adjustForhiddenSeqs routine
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | RepresentGroup count items
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Null element checked
|
commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | HiddenSequences now array, not hashtable
|
commit | commitdiff | tree |
| next |
git://source.jalview.org / jalview.git / search