| 2016-11-11 |
gmungoc | JAL-2295 tests now 'network-free' with local PDB and...
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-2295 JAL-2269 JAL-2319 mockable SIFTS file, fix...
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-2295 improved integrity of 'isFinishedInit' flag
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-1270 corrected command-line args
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-2295 set finishedInit to false before checking...
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-2295 test that verifies transfer of features to...
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-2295 sorted properties for readability
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-2295 (optionally) return Chimera command reply
|
commit | commitdiff | tree |
| 2016-11-11 |
gmungoc | JAL-2295 correct test for Float.isNaN(score) !
|
commit | commitdiff | tree |
| 2016-11-10 |
gmungoc | JAL-2295 additional tests, stronger sanitisation of...
|
commit | commitdiff | tree |
| 2016-11-09 |
gmungoc | JAL-2295 set attributes commands include feature value...
|
commit | commitdiff | tree |
| 2016-11-09 |
gmungoc | JAL-2295 single constant for "RESNUM" feature name
|
commit | commitdiff | tree |
| 2016-11-08 |
gmungoc | JAL-2295 JAL-1596 method to pass a command script file...
|
commit | commitdiff | tree |
| 2016-11-08 |
gmungoc | JAL-2295 feature and colour commands refactored to...
|
commit | commitdiff | tree |
| 2016-11-08 |
gmungoc | JAL-2295 method added to return a compact mapped range...
|
commit | commitdiff | tree |
| 2016-11-08 |
gmungoc | JAL-2295 extracted AtomSpecModel for reuse in Chimera...
|
commit | commitdiff | tree |
| 2016-11-08 |
gmungoc | JAL-2295 make RangeComparator a top level class for...
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | Merge branch 'develop' into features/JAL-2295setChimeraAttri...
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-1270 renamed helper method so it is not run as...
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-2272 another test case
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-1805 groups=Functional added where missing
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-2272 unit tests added for Platform.isControlDown
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-2318 updated help text
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-2282 show url links that need checked; remove ...
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-2295 handle no progress bar message properly
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-2295 small tidy of javadoc only
|
commit | commitdiff | tree |
| 2016-11-07 |
gmungoc | JAL-2295 (unoptimised) write Jalview features as Chimera...
|
commit | commitdiff | tree |
| 2016-11-04 |
gmungoc | JAL-2272 right mouse button on Mac is not Cmd equivalent!
|
commit | commitdiff | tree |
| 2016-11-03 |
gmungoc | JAL-2281 test added to show searchRefs is now not case...
|
commit | commitdiff | tree |
| 2016-11-03 |
gmungoc | JAL-2295 step 1 new menu item to transfer Jalview attributes...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-2301 table formatted, and corrected to match the...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 JAL-1854 encapsulate 'magic number' threshold...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 ProfileI interface for Profile
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 test updated for percentage rounded
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 Profile and ResidueCount moved from analysis...
|
commit | commitdiff | tree |
| 2016-11-02 |
gmungoc | JAL-98 wording "negatively conserved" now "absence...
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | Conservation now using ResidueCount; tests added
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | JAL-98 use Integer constants; tests added for propHash...
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | JAL-98 typo in javadoc
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | JAL-98 simplified repeat() method
|
commit | commitdiff | tree |
| 2016-11-01 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
|
commit | commitdiff | tree |
| 2016-10-31 |
gmungoc | JAL-98 round when formatting dec places
|
commit | commitdiff | tree |
| 2016-10-27 |
gmungoc | JAL-2282 test assertions for 'other' dbsource
|
commit | commitdiff | tree |
| 2016-10-27 |
gmungoc | JAL-98 refactor bleachColour() to ColorUtils
|
commit | commitdiff | tree |
| 2016-10-27 |
gmungoc | JAL-2287 treat Escape like Cancel in dialog box
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-2287 Cancel option on Close Chimera? dialog
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | Merge branch 'bug/JAL-98consensusMemory' into develop
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-2286 modal residue check + commenting
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-98 null reference to globalColourScheme as it has...
|
commit | commitdiff | tree |
| 2016-10-26 |
gmungoc | JAL-2286 javadoc, refactor, unit tests for threshold...
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-2286 use constant for fixed colours
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 javadoc corrected
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 javadoc added
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 minor fixes to / tests for annotation derivation
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 field comments updated
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 small efficiency fix + commenting
|
commit | commitdiff | tree |
| 2016-10-25 |
gmungoc | JAL-98 javadoc / comments updated
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-98 fixme comment removed - nothing to do
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-98 ResidueCount 100% test coverage (and bug fixes!)
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-2272 Cmd-drag to group edit sequences on Mac (Ctrl...
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-2283 corrected preferences settings for test
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | Merge branch 'develop' into bug/JAL-98consensusMemory
|
commit | commitdiff | tree |
| 2016-10-24 |
gmungoc | JAL-2283 set 'by conservation' correctly when changing...
|
commit | commitdiff | tree |
| 2016-10-14 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into task...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2253 2 second timeout on ping URL, default 5 minutes...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into develop
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-1479 revise warning message to suit all contexts
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2044 increase Jmol file load timeout from 5 to...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2044 ensure AAStructureBindingModel.pdbEntry has...
|
commit | commitdiff | tree |
| 2016-10-13 |
gmungoc | JAL-2044 include model name in progress bar message...
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into develop
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | JAL-2241 check for null jprovider when processing New...
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | Merge branch 'releases/Release_2_10_Branch' into develop
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | JAL-1479 small tidy of error message when Sifts mapping...
|
commit | commitdiff | tree |
| 2016-10-11 |
gmungoc | JAL-2233 reverted changes to Jmol logging levels
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | JAL-2254 map error text in root node of EMBL XML response
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | Merge branch 'develop' into bug/JAL-98consensusMemory
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | Merge branch 'develop' into task/JAL-2196pdbeProperties
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | JAL-2252 now buffered read of 3 lines of a time in...
|
commit | commitdiff | tree |
| 2016-10-06 |
gmungoc | JAL-2245 checks for null added (in case EMBL fetch...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | Merge branch 'develop' into task/JAL-2196pdbeProperties
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 revert to using SequenceOntologyLite due to...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 configure full SO for desktop, SOLite for...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-2245 defence against NullPointer if no EMBL data...
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 use full SO in desktop application
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-2105 update Ensembl REST version to 4.7
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 refined warning message
|
commit | commitdiff | tree |
| 2016-10-05 |
gmungoc | JAL-1191 added mRNA isA transcript to SequenceOntologyLite...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | Merge branch 'bug/JAL-2245enaXmlChange' into develop
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | Merge branch 'bug/JAL-2210_hack_for_Release_2_10' into...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2245 Castor mapping and code changes for change...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2232 some fix / partial fix of failing tests
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2232 added test that failed before last fix, passes...
|
commit | commitdiff | tree |
| 2016-10-04 |
gmungoc | JAL-2232 JAL-2154 update dbrefs to newly created dataset...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-2110 javadoc formatting only
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-2110 JAL-1705 handle not found (400) better
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-2110 additional tests for setDatasetSequence, javadoc...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-98 throw exception (unhandled) for int overthrow...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-98 use Profile to store consensus, ResidueCount...
|
commit | commitdiff | tree |
| 2016-10-03 |
gmungoc | JAL-98 bespoke fast percentage formatter for consensus...
|
commit | commitdiff | tree |
| next |
git://source.jalview.org / jalview.git / search