| 2006-06-23 |
amwaterhouse | Uses FeaturesFile parser, GFF and Jalview
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commit | commitdiff | tree |
| 2006-06-23 |
amwaterhouse | ++ --
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | Check featureLinks is not null
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | ParseFeaturesFile takes protocol as arg
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | Takes AlignFrame as arg, to update progressbar
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | AlignFrame is now the FeatureListener
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | Fetch DBRefs
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | Ye olde SequenceFeatureFetcher
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | Renamed to DBRefFetcher
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commit | commitdiff | tree |
| 2006-06-22 |
amwaterhouse | Not used in Jalview
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Use spice-3d das1 source list for nowjalview/gui/DasSourceBr...
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Fixed to trial registry at the moment
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | new files
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Not using AxisDasRegistry
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Not needed
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | check helperUrl is not null
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Das client files
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Correction - use start and end
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Dont add start and end for the moment
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Wrap alignment moved to alignFrame
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Non positional features shown as mouse over
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | fr.findAllFeatures on init
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Correct citation
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Unnecessary import
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | FeatureRenderer synchronized featuresAdded method
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commit | commitdiff | tree |
| 2006-06-15 |
amwaterhouse | Maintain status and position only for uniprot parsing
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commit | commitdiff | tree |
| 2006-06-14 |
amwaterhouse | Fileloading progressbar
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commit | commitdiff | tree |
| 2006-06-14 |
amwaterhouse | Status is now in otherData of feature
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commit | commitdiff | tree |
| 2006-06-14 |
amwaterhouse | Sequence checks for duplicate features
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commit | commitdiff | tree |
| 2006-06-14 |
amwaterhouse | parseAppletParam
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commit | commitdiff | tree |
| 2006-06-14 |
amwaterhouse | parseAppletParameter
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Retrieve multiple EMBL ids
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Size adjustments for MacOSX
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Remove unnecessary lines
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | createColourFromName if not specified
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Export annotations as Jalview format
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Feature and annotation parsing moved to io
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | otherDetails
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Remove getsfarray
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | getSequencesArray
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | setAcceptAllFileFilter fixes bug on MacOSX
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Export features / annotations
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Save text to file
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | createColourFromName
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Function not used
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | readAnnotationFile
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | parseFeaturesFile
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commit | commitdiff | tree |
| 2006-06-09 |
amwaterhouse | Annotation/feature exporter
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | New link image
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Wrap alignment added to preferences
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Checks in case DasSource is null
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Smaller file size
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | New link image
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | DAS client libraries
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Remove unnecessary ints
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | DAS sources added
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | PopupMenu displays URL links
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | ignore begin==0 and end==0 for the moment
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Create random colour only if Colour is not specified
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Implements FeatureListener
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | new DasSequenceFetcher
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | DAS Settings tab added
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Use a label with html instead of textarea
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Remove position, add score and links
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Parameter to show feature settings
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | Tooltips for features, links for features added
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commit | commitdiff | tree |
| 2006-06-07 |
amwaterhouse | NEW FILES
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commit | commitdiff | tree |
| 2006-05-17 |
amwaterhouse | Restrict annotation panel to 50% window on load
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commit | commitdiff | tree |
| 2006-05-16 |
amwaterhouse | graphColour, graphGroup, more relaxed annotation requirements
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commit | commitdiff | tree |
| 2006-05-16 |
amwaterhouse | Save annotation colours, hideConsevation etc, graphGroups
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commit | commitdiff | tree |
| 2006-05-16 |
amwaterhouse | Switch off dashedline after drawing groups
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commit | commitdiff | tree |
| 2006-05-16 |
amwaterhouse | Remove unwanted line
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commit | commitdiff | tree |
| 2006-05-16 |
amwaterhouse | Allow for scroller position
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commit | commitdiff | tree |
| 2006-05-16 |
amwaterhouse | Remove system.out
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commit | commitdiff | tree |
| 2006-05-16 |
amwaterhouse | Rearrange annotations
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commit | commitdiff | tree |
| 2006-05-15 |
amwaterhouse | Monospaced font not allowed if charWidth stretched
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commit | commitdiff | tree |
| 2006-05-15 |
amwaterhouse | Brackets around orgin calculation
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commit | commitdiff | tree |
| 2006-05-15 |
amwaterhouse | All or nothing drawing display char
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commit | commitdiff | tree |
| 2006-05-15 |
amwaterhouse | EPS font width is a double, check this for monospacedFont
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commit | commitdiff | tree |
| 2006-05-15 |
amwaterhouse | If headless, get the width of Jalview wrapped window...
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commit | commitdiff | tree |
| 2006-05-12 |
amwaterhouse | returns to zero degrees when stopped
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commit | commitdiff | tree |
| 2006-05-12 |
amwaterhouse | pass viewport to fileloader, as we need to firepropertychang...
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commit | commitdiff | tree |
| 2006-05-11 |
amwaterhouse | Slight mod url chooser for Mac users
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commit | commitdiff | tree |
| 2006-05-11 |
amwaterhouse | Remove commented line
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commit | commitdiff | tree |
| 2006-05-11 |
amwaterhouse | Slightly smaller recent panel
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commit | commitdiff | tree |
| 2006-05-11 |
amwaterhouse | Maintain numbering if remove left is undone
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commit | commitdiff | tree |
| 2006-05-11 |
amwaterhouse | Typo
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commit | commitdiff | tree |
| 2006-05-11 |
amwaterhouse | Invert selection
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commit | commitdiff | tree |
| 2006-05-11 |
amwaterhouse | Recently loaded files, urls, append sequences to Alignment
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | sequenceRef added to annotation
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | Correction for sequences with start not equal to 1
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | Copy and paste of annotations with seqrefs
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | implements ClipboardOwner
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | saves and loads annotations with seqrefs
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | Draw an offscreen Image
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | Annotations must createSequenceMapping if seqRef not...
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | Create sequence mapping for annotations
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | addAnnotation with seqRef
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commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | Changes case to end of alignment
|
commit | commitdiff | tree |
| 2006-05-10 |
amwaterhouse | remove import
|
commit | commitdiff | tree |
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