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2023-01-17	Ben Soares	Merge branch 'develop' into merge/JAL-1988_JAL-3772...	commit \| commitdiff \| tree
2023-01-16	Ben Soares	JAL-3416 More tweaking of FlatLaf. Problem with macOS...	commit \| commitdiff \| tree
2023-01-11	Ben Soares	JAL-1988 JAL-3772 Mark the _default_ STARTUP_FILE as...	commit \| commitdiff \| tree
2023-01-06	Ben Soares	JAL-3416 More explicit setting of FlatLaf macOS theme	commit \| commitdiff \| tree
2023-01-06	Ben Soares	JAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme...	commit \| commitdiff \| tree
2023-01-06	Ben Soares	JAL-3416 remove a missed panel titlebar icon in TreePanel	commit \| commitdiff \| tree
2023-01-06	Ben Soares	JAL-3416 Fix file permissions on bundled macOS JREs	commit \| commitdiff \| tree
2022-11-29	Ben Soares	JAL-4101 Updated Rfam* tests	commit \| commitdiff \| tree
2022-11-29	Ben Soares	JAL-4101 Updated DEFAULT_RFAM_BASEURL	commit \| commitdiff \| tree
2022-11-16	Ben Soares	Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE...	commit \| commitdiff \| tree
2022-11-16	Ben Soares	JAL-3416 make flatlaf default for linux	commit \| commitdiff \| tree
2022-11-09	Ben Soares	JAL-3416 Add necessary logo to non-internal Frames	commit \| commitdiff \| tree
2022-11-09	Ben Soares	Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE...	commit \| commitdiff \| tree
2022-11-09	Ben Soares	JAL-3416 Add necessary logo to non-internal Frames	commit \| commitdiff \| tree
2022-11-09	Ben Soares	Merge branch 'improvement/JAL-3416_default_to_LIVE_DRAG_MODE...	commit \| commitdiff \| tree
2022-11-09	Ben Soares	JAL-3416 Remove all JFrame/JInternalFrame icons (set...	commit \| commitdiff \| tree
2022-11-09	Ben Soares	Merge branch 'bug/JAL-1988_JAL-3772_improved_quit_handling...	commit \| commitdiff \| tree
2022-11-09	Ben Soares	JAL-1988 JAL-3772 Test for FORCE_QUIT whilst saving...	commit \| commitdiff \| tree
2022-11-08	Ben Soares	Merge branch 'bug/JAL-1988_JAL-3772_improved_quit_handling...	commit \| commitdiff \| tree
2022-11-08	Ben Soares	JAL-1988 JAL-3776 Formatting JvOptionPane	commit \| commitdiff \| tree
2022-11-08	Ben Soares	JAL-1988 JAL-3772 Tests for various quitting scenarios	commit \| commitdiff \| tree
2022-11-08	Ben Soares	JAL-1988 JAL-3772 Fixes highlighted by tests	commit \| commitdiff \| tree
2022-11-04	Ben Soares	Merge branch 'merge/JAL-4054+JAL-4064' into ben-big...	commit \| commitdiff \| tree
2022-11-04	Ben Soares	JAL-3416 Added logoIcon to quit (and potentially other...	commit \| commitdiff \| tree
2022-11-04	Ben Soares	JAL-1998 JAL-3772 JAL-3416 Merge conflict resolution...	commit \| commitdiff \| tree
2022-11-04	Ben Soares	JAL-4064 JAL-4054 Combined install4j10 template with...	commit \| commitdiff \| tree
2022-11-04	Ben Soares	JAL-4054 Altered file association templates and generated...	commit \| commitdiff \| tree
2022-11-03	Ben Soares	JAL-3416 File Chooser iconified, JvOptionPanes iconified...	commit \| commitdiff \| tree
2022-11-03	Ben Soares	JAL-1988 JAL-3772 Allow other window closing dialogs...	commit \| commitdiff \| tree
2022-11-03	Ben Soares	JAL-3416 More JInternalFrame icons	commit \| commitdiff \| tree
2022-11-03	Ben Soares	JAL-1988 JAL-3772 Tidying of unspecified Callable declaratio...	commit \| commitdiff \| tree
2022-11-03	Ben Soares	JAL-3416 Start to add JInternalFrame icons (to replace...	commit \| commitdiff \| tree
2022-11-02	Ben Soares	JAL-1988 JAL-3772 Moving packages to somewhere more...	commit \| commitdiff \| tree
2022-11-01	Ben Soares	JAL-3416 set flatlaf default drag mode to LIVE_DRAG_MODE	commit \| commitdiff \| tree
2022-11-01	Ben Soares	JAL-1988 JAL-3772 Change default alignmentviewport...	commit \| commitdiff \| tree
2022-11-01	Ben Soares	JAL-4064 tidying build.gradle	commit \| commitdiff \| tree
2022-11-01	Ben Soares	JAL-4064 re-added bundled macOS JREs as Filesets, which...	commit \| commitdiff \| tree
2022-11-01	Ben Soares	JAL-4064 Cleaned up file sets in install4j template...	commit \| commitdiff \| tree
2022-11-01	Ben Soares	JAL-4064 Download JRE/JDKs from Azul if not os/arch...	commit \| commitdiff \| tree
2022-10-29	Ben Soares	JAL-1988 JAL-3772 removed a debugging log line	commit \| commitdiff \| tree
2022-10-28	Ben Soares	JAL-1988 JAL-3772 Removed 'Wait' button from waitDialog...	commit \| commitdiff \| tree
2022-10-28	Ben Soares	JAL-1988 JAL-3772 Fixed wait between waitDialog appearances...	commit \| commitdiff \| tree
2022-10-27	Ben Soares	JAL-1988 Allow generic Container object in JvOptionPane...	commit \| commitdiff \| tree
2022-10-27	Ben Soares	Merge branch 'develop' into bug/JAL-1988_JAL-3772_improved_q...	commit \| commitdiff \| tree
2022-10-26	Ben Soares	JAL-3416 (and others) increasing number of STDERR lines...	commit \| commitdiff \| tree
2022-10-25	Ben Soares	JAL-3416 Making FlatLaF default for macs due to a problem...	commit \| commitdiff \| tree
2022-10-24	Ben Soares	JAL-1988 JAL-3772 wait timer working first time but...	commit \| commitdiff \| tree
2022-10-24	Ben Soares	JAL-1988 JAL-3772 Non-blocking modal dialogs for unsaved...	commit \| commitdiff \| tree
2022-10-11	Ben Soares	JAL-4014 Changed gecos display names to match labels...	commit \| commitdiff \| tree
2022-09-29	Ben Soares	Merge branch 'develop' into bug/JAL-1988_JAL-3772_improved_q...	commit \| commitdiff \| tree
2022-09-26	Ben Soares	JAL-1988 JAL-3772 linked undostack to saved changes...	commit \| commitdiff \| tree
2022-09-26	Ben Soares	JAL-1988 better wording for quit dialog	commit \| commitdiff \| tree
2022-09-23	Ben Soares	JAL-1988 JAL-3772 Quit confirmation dialog boxes with...	commit \| commitdiff \| tree
2022-09-23	Ben Soares	JAL-3676 extra information about jalview_properties...	commit \| commitdiff \| tree
2022-09-23	Ben Soares	JAL-1988 property based fake delay whilst saving project...	commit \| commitdiff \| tree
2022-08-23	Ben Soares	JAL-4014 JAL-4063 Added gecos colourScheme names (INFO...	commit \| commitdiff \| tree
2022-07-26	Ben Soares	JAL-4036 Fixed the virus_host_id query field	commit \| commitdiff \| tree
2022-07-26	Ben Soares	JAL-4036 Added text to help about different number...	commit \| commitdiff \| tree
2022-07-25	Ben Soares	JAL-4036 updated help about new UniProt API	commit \| commitdiff \| tree
2022-07-25	Ben Soares	JAL-4036 moved a comment block	commit \| commitdiff \| tree
2022-07-25	Ben Soares	JAL-4034 button looks better also on other OSes with...	commit \| commitdiff \| tree
2022-07-22	Ben Soares	JAL-4036 Changes made from code review CR-JAL-265	commit \| commitdiff \| tree
2022-07-22	Ben Soares	JAL-4036 Add getDbName to the GFTSPanelI and add an...	commit \| commitdiff \| tree
2022-07-22	Ben Soares	JAL-4036 removing the query field code from the dropdown...	commit \| commitdiff \| tree
2022-07-21	Ben Soares	JAL-4036 Don't autosearch changing index when autosearch...	commit \| commitdiff \| tree
2022-07-21	Ben Soares	JAL-4036 add search fieldname to dropdown list	commit \| commitdiff \| tree
2022-07-21	Ben Soares	JAL-4036 removed often duplicated pluralisation in...	commit \| commitdiff \| tree
2022-07-21	Ben Soares	JAL-4036 New configuration, target and pagination process...	commit \| commitdiff \| tree
2022-07-15	Ben Soares	JAL-4034 Use the new non-modal JDialog for 3DBeacons...	commit \| commitdiff \| tree
2022-07-15	Ben Soares	JAL-4034 Allow request for non-modal JDialog, which...	commit \| commitdiff \| tree
2022-07-12	Ben Soares	JAL-4034 change to jalview property name	commit \| commitdiff \| tree
2022-07-12	Ben Soares	JAL-4034 showConfirmDialog works for both desktop and...	commit \| commitdiff \| tree
2022-07-11	Ben Soares	JAL-4034 Non-blocking 3D Beacons query after warning...	commit \| commitdiff \| tree
2022-07-11	Ben Soares	JAL-4034 allow a jalview_property to set the threshold...	commit \| commitdiff \| tree
2022-06-28	Ben Soares	Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS_APQH...	commit \| commitdiff \| tree
2022-06-28	Ben Soares	JAL-1988 Don't put Quit in the File menu if there's...	commit \| commitdiff \| tree
2022-06-23	Ben Soares	Merge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS_APQH...	commit \| commitdiff \| tree
2022-06-23	Ben Soares	JAL-1988 Check for setHandler capability to avoid About...	commit \| commitdiff \| tree
2022-06-13	Ben Soares	JAL-1988 Hack to ensure Quit dialog box is moved to...	commit \| commitdiff \| tree
2022-06-13	Ben Soares	JAL-4004 Fix missing whatsNew.html when not building...	commit \| commitdiff \| tree
2022-06-07	Ben Soares	JAL-4020 class formatting	commit \| commitdiff \| tree
2022-06-06	Ben Soares	JAL-4020 updated tests	commit \| commitdiff \| tree
2022-06-06	Ben Soares	JAL-4020 class reformatting	commit \| commitdiff \| tree
2022-05-12	Ben Soares	JAL-4014 4 gecos colour schemes added	commit \| commitdiff \| tree
2022-04-27	Ben Soares	JAL-1544 version number typo, probably copy and paste	commit \| commitdiff \| tree
2022-04-27	Ben Soares	JAL-3989 Populate template files for hugo build: archive...	commit \| commitdiff \| tree
2022-04-25	Ben Soares	JAL-3989 moved getdown build dirs to build/website...	commit \| commitdiff \| tree
2022-04-25	Ben Soares	JAL-3989 Independent creation of JSON installer sections	commit \| commitdiff \| tree
2022-04-21	Ben Soares	Merge branch 'develop' into merge/JAL-3978+JAL-3553...	commit \| commitdiff \| tree
2022-04-21	Ben Soares	Merge branch 'develop' into task/JAL-3991_check_actual_JAVA_...	commit \| commitdiff \| tree
2022-04-06	Ben Soares	JAL-3991 Made info displayed only when needed (Java...	commit \| commitdiff \| tree
2022-04-06	Ben Soares	JAL-3991 Added information output about the slightly...	commit \| commitdiff \| tree
2022-04-06	Ben Soares	JAL-3991 JAVA_COMPILE_VERSION put into build_properties...	commit \| commitdiff \| tree
2022-04-05	Ben Soares	JAL-3989 slight refactor of build.gradle, add more...	commit \| commitdiff \| tree
2022-04-04	Ben Soares	JAL-3989 fix a build date once in build.gradle, not...	commit \| commitdiff \| tree
2022-03-31	Ben Soares	Merge branch 'task/JAL-3553_improved_install4j_output_txt...	commit \| commitdiff \| tree
2022-03-31	Ben Soares	Merge branch 'develop' into improvement/JAL-3978_add_gradle_...	commit \| commitdiff \| tree
2022-03-30	Ben Soares	JAL-360 JAL-3975 make AlignFrame the parent of FeatureEditor...	commit \| commitdiff \| tree
2022-03-21	Ben Soares	JAL-3416 Updated FlatLaF to 2.1	commit \| commitdiff \| tree
2022-03-18	Ben Soares	JAL-3978 Using getdowninstanceappdir and getdowninstanceappb...	commit \| commitdiff \| tree
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