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testing in Bamboo; no problem locally
2018-11-13
gmungoc
JAL-3026 test for File.hashCode problem
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2018-11-13
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of...
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2018-11-12
gmungoc
JAL-3076 JalviewJS requires lower case content-type...
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2018-11-08
gmungoc
JAL-1889 ignore Clover instrumentation in test (second...
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2018-11-08
gmungoc
JAL-1889 unit test tweaks for running on server
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2018-11-08
gmungoc
JAL-3116 better unmarshalling of EMBL/Uniprot XML
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2018-11-08
gmungoc
JAL-3048 use JalviewJS compatible JalviewFileChooser...
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2018-11-08
gmungoc
JAL-3048 override showOpenDialog with JalviewJS compatible...
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2018-11-01
gmungoc
Merge branch 'feature/JAL-3143ensemblJSON' into
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2018-11-01
gmungoc
JAXB default namespace from ObjectFactory
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2018-11-01
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of
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2018-11-01
gmungoc
Merge branch 'feature/JAL-3144noJTree' into
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2018-11-01
gmungoc
Merge branch 'Jalview-BH/JAL-3026' into
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2018-11-01
gmungoc
JAL-3048 JAL-3056 reinstate save/load project, colour...
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2018-10-31
gmungoc
Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into...
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2018-10-31
gmungoc
Merge branch 'Jalview-BH/JAL-3026' into feature/JAL...
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2018-10-31
gmungoc
JAL-3026 skip unsupported HttpURLConnection methods...
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2018-10-30
gmungoc
JAL-3144 left aligned looks better (and works in JalviewJS!)
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2018-10-30
gmungoc
JAL-3144 query URL corrected
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2018-10-30
gmungoc
JAL-3144 close SequenceFetcher before opening PDB/Uniprot...
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2018-10-30
gmungoc
JAL-3144 spelling, Javadoc, abstract method for JalviewJS
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2018-10-30
gmungoc
Merge branch 'Jalview-BH/JAL-3026' into feature/JAL...
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2018-10-29
gmungoc
JAL-3144 SequenceFetcher without JDatabaseTree
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2018-10-29
gmungoc
JAL-3038 add ActionListener and FocusListener to SwingJS...
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2018-10-25
gmungoc
JAL-3143 unit tests updated for code changes!
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2018-10-25
gmungoc
JAL-3143 comma-delimited feature attributes for alleles,
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2018-10-25
gmungoc
JAL-3143 fetch Ensembl(Genomes) features as JSON not GFF
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2018-10-23
gmungoc
JAL-3139 check group visibility when removing 'redundant...
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2018-10-08
gmungoc
JAL-1244 comments, javadoc, method signature tweaks
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2018-10-08
gmungoc
JAL-1244 editSequence extract method refactoring
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2018-10-05
gmungoc
JAL-1244 improved status message for insert/delete gap
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2018-10-04
gmungoc
JAL-3132 status message for sequence and/or graph group...
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2018-10-04
gmungoc
JAL-1244 no status message (yet) for locked edit of...
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2018-10-04
gmungoc
JAL-1244 status message for insert/delete gaps on single...
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2018-10-04
gmungoc
JAL-1244 status message while dragging a stretch group
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2018-10-04
gmungoc
JAL-3132 set status message when over sequence id or...
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2018-10-04
gmungoc
JAL-3093 unit tests, no mouse action over left/right...
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2018-10-03
gmungoc
JAL-3093 tweaks to code and test for 3px gap above...
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2018-10-02
gmungoc
JAL-3093 unit tests for SeqPanel.findMousePosition
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2018-10-02
gmungoc
JAL-3093 limited Consensus popup menu when in wrapped...
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2018-10-02
gmungoc
JAL-3093 added MousePos.isOverAnnotation() for extra...
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2018-10-01
gmungoc
JAL-3093 'read-only' annotations when in wrapped mode
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2018-10-01
gmungoc
JAL-3093 refactor (+test) Annotation Labels tooltip...
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2018-10-01
gmungoc
JAL-3093 unit tests for finding annotation row index...
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2018-10-01
gmungoc
JAL-3093 show annotation tooltips and status message...
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2018-09-28
gmungoc
JAL-3063 service param files read/saved using JAXB...
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2018-09-28
gmungoc
JAL-3063 top level element added to JalviewWsParamSet.xsd
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2018-09-28
gmungoc
JAL-3063 comments re use of xjc to generate Java binding...
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2018-09-27
gmungoc
JAL-2791 refactored Export Features to apply all visibility...
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2018-09-27
gmungoc
JAL-2791 new method to test if feature fails colour...
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2018-09-27
gmungoc
JAL-2791 method that tests all conditions for feature...
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2018-09-26
gmungoc
JAL-3125 tidy up
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2018-09-26
gmungoc
JAL-3125 avoid slider 'rounding' threshold field value
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2018-09-24
gmungoc
JAL-3063 tidy commented out code
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2018-09-21
gmungoc
JAL-3063 wrappers with check for null getting optional...
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2018-09-21
gmungoc
JAL-3120 preserve feature colour/mincolour/maxcolour...
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2018-09-20
gmungoc
JAL-2843 tweaks to help text for filters
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2018-09-20
gmungoc
JAL-2843 help text for colour by attribute, feature...
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2018-09-19
gmungoc
JAL-3120 preserve plain colour value when changing...
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2018-09-19
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2018-09-19
gmungoc
JAL-2808 JAL-3032 drop tabbed layout for Colours and...
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2018-09-19
gmungoc
JAL-3063 use JAXB for 'Save as Project' and load project...
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2018-09-19
gmungoc
JAL-3063 unit test for save/load project switched to...
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2018-09-18
gmungoc
JAL-3063 Save/Load user defined colours using JAXB
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2018-09-18
gmungoc
JAL-3063 Save/Load user colour scheme using JAXB
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2018-09-18
gmungoc
JAL-3063 top level element added to colours schema...
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2018-09-18
gmungoc
JAL-3063 New View via JAXB
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2018-09-18
gmungoc
JAL-3063 temporary extra menu option to save/load project...
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2018-09-18
gmungoc
JAL-3063 first version of Jalview2XML using JAXB to...
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2018-09-18
gmungoc
JAL-3063 JAXB binding classes generated by xjc from...
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2018-09-18
gmungoc
JAL-3063 tweak schema so JAXB tool xjc recognises XML...
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2018-09-18
gmungoc
JAL-3063 tweak schema so JAXB generates enums for enumerated...
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2018-09-17
gmungoc
JAL-3116 test method renamed to match code
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2018-09-17
gmungoc
JAL-3116 unit tests adapted to EMBL over JAXB
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2018-09-14
gmungoc
JAL-3116 parse EMBL XML with JAXB (todo: update unit...
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2018-09-13
gmungoc
JAL-3116 Uniprot XML unmarshalled using JAXB not Castor
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2018-09-12
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2018-09-12
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2018-09-12
gmungoc
JAL-1551 reinstated Save actions
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2018-09-11
gmungoc
JAL-3113 override minimum frame size in a way that...
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2018-09-11
gmungoc
JAL-3048 recoded edit View Name dialog for JalviewJS
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2018-09-11
gmungoc
JAL-3056 offer New / Expand / Gather View in JalviewJS
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2018-09-10
gmungoc
JAL-3099 use Alignment.getVisibleWidth() where wanted
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2018-09-10
gmungoc
JAL-3099 new method AlignmentI.getVisibleWidth()
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2018-09-10
gmungoc
JAL-3097 adjust viewport width on hiding columns
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2018-09-10
gmungoc
JAL-3108 fix concurrency bug in Reveal action handler
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2018-09-03
gmungoc
Merge branch 'trialMerge' into releases/Release_2_10_5_Branch
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2018-09-03
gmungoc
JAL-3076 fetch Ensembl sequence as JSON instead of...
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2018-09-03
gmungoc
JAL-3079 drop use of clip region while drawing wrapped...
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2018-08-31
gmungoc
JAL-3003 remove redundant call to drawSelectionGroup
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2018-08-31
gmungoc
Merge branch 'bug/JAL-3003epsWithSelection' into trialMerge
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2018-08-30
gmungoc
Merge branch 'bug/JAL-247pngShowHiddenSeqMarks' into...
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2018-08-30
gmungoc
JAL-3055 refinements to alternatives to deriveFont
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2018-08-30
gmungoc
JAL-3079 don't create new Graphics to draw as it confuses...
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2018-08-28
gmungoc
JAL-3059 use correct border colour for groups
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2018-08-28
gmungoc
JAL-3003 draw selection group outline on main graphics...
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2018-08-28
gmungoc
JAL-3055 corrected logo drawing in JS
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2018-08-28
gmungoc
JAL-247 comment to clarify wrapped print algorithm
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2018-08-28
gmungoc
JAL-247 print/export wrapped uses common code to draw...
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2018-08-28
gmungoc
JAL-3087 include full alignment height in repeating...
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