| 2006-10-24 |
amwaterhouse | changeCase, removeGaps moved to commands package
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | maxIdLength redundant, deleteCols, trimLeft, removeGaps...
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Uses RemoveGapsCommand
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Remove variables not used
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Remove unneccessary import
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Make everything final
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | New accelerators
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Commented out for compilation
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | setOrder is public
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Commands which can be done, or undone
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commit | commitdiff | tree |
| 2006-10-24 |
amwaterhouse | Its historycvs remove jalview/datamodel/HistoryItem...
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Wait for response from server before next sequence
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | showqual, showcons never used
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | remove html and body from tooltip
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | new feature args
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Can set description for new features
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Faded anntotations when recalculating
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | set conserve and quality null if outofmemory
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | No longer a FeatureListener
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | parseDescriptionHTML
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | draw text after linkimage
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Remove system.out
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commit | commitdiff | tree |
| 2006-10-18 |
amwaterhouse | Gerneral XML parse error
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | showQuality may be updated during archive file load
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Convenient function findEndRes
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Add features from Popupmenu
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Overview may request index beyond alignment height
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Use i, not index if not representedSeqs
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | If conservation is null, disable Blosum62 and conservation...
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Annotasiont[j] might be null
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Local adjustForhiddenSeqs routine
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | RepresentGroup count items
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Null element checked
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | HiddenSequences now array, not hashtable
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commit | commitdiff | tree |
| 2006-10-12 |
amwaterhouse | Comment out debug to compile applet
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | No need to find index when deleting
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Calculate alWidth earlier
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Remove growing hashtable
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Check on null consensus
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Must repaint whole alignPanel
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | MaxResidue must be at least 2
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Remove unneccessary separator
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Only getGroups once if groupEditingcvs update
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | 1.1 compatible
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Use AAFrequency final keys
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | SetTooltip empty
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Optimized
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | aaIndex replaces aaHash
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | static final strings for consensus keys
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commit | commitdiff | tree |
| 2006-10-10 |
amwaterhouse | Consensus and conservation updated in threads
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commit | commitdiff | tree |
| 2006-10-06 |
amwaterhouse | AAFrequency optimized
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commit | commitdiff | tree |
| 2006-10-06 |
amwaterhouse | Set consensus as hashtble[]
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | Multiple Views
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | BatchSize now 10
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | OutOfMemoryError test
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | TabbedPanes for views
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | lower case available
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | AlignFrame must take width and height
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | Sequenceset may be empty, multiple views
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | DEFAULT_WIDTH
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | Viewname, sequencesetid, gatheredViews
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commit | commitdiff | tree |
| 2006-10-05 |
amwaterhouse | Sequences are optionalcvs diff vamsas.xsd
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | Check annotation is editable
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | Send DAS requests in batches of 20
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | DB seqs may be lower or upper case
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | BoldFont upperCase
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | Remove empty() from feature ToolTip
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | Check selection scroll beyond aligmnment height
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | Check on vscrollMax values
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | upperCaseBold
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commit | commitdiff | tree |
| 2006-10-03 |
amwaterhouse | TurnColour bug on popupmenu applet
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commit | commitdiff | tree |
| 2006-09-18 |
amwaterhouse | Draw hidden column marker correctly
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commit | commitdiff | tree |
| 2006-09-18 |
amwaterhouse | click node to select sequences
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commit | commitdiff | tree |
| 2006-09-15 |
amwaterhouse | Simplified schema
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commit | commitdiff | tree |
| 2006-09-15 |
amwaterhouse | Simplified layout
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | hideSequence hide all before recalc consensus
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | Copy consensus
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | 2.1.1 bug fix
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | 2.1.1 bug fix
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | Add copy consensus sequence
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | Allow alt for group editing
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | For now ignore middle mouse font resize on Mac applet
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commit | commitdiff | tree |
| 2006-09-12 |
amwaterhouse | Allow alt button for Mac applet group editing
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commit | commitdiff | tree |
| 2006-09-11 |
amwaterhouse | Comment out lower case colouring for bug fix release
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commit | commitdiff | tree |
| 2006-09-11 |
amwaterhouse | Remove system.outs
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commit | commitdiff | tree |
| 2006-09-11 |
amwaterhouse | get idWidth should use italic font when getting size
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commit | commitdiff | tree |
| 2006-09-11 |
amwaterhouse | Error message if file not found moved for headless...
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commit | commitdiff | tree |
| 2006-09-11 |
amwaterhouse | visWidth allows borders to be drawn around offscreen...
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commit | commitdiff | tree |
| 2006-09-11 |
amwaterhouse | Remove system.out
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commit | commitdiff | tree |
| 2006-09-11 |
amwaterhouse | getVisibleIdWidth() for making images
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commit | commitdiff | tree |
| 2006-09-01 |
amwaterhouse | Dont look for middle mouse on the Mac
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commit | commitdiff | tree |
| 2006-09-01 |
amwaterhouse | MAC moved to viewport
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commit | commitdiff | tree |
| 2006-09-01 |
amwaterhouse | feature settings
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commit | commitdiff | tree |
| 2006-09-01 |
amwaterhouse | Feature Settings
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commit | commitdiff | tree |
| 2006-08-30 |
amwaterhouse | GraphHeight might be zero
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commit | commitdiff | tree |
| 2006-08-30 |
amwaterhouse | jnet file is 1 to 1 mapping
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commit | commitdiff | tree |
| 2006-08-30 |
amwaterhouse | Remove unnecessary separotor
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commit | commitdiff | tree |
| 2006-08-30 |
amwaterhouse | Gap added to aa3Hash
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commit | commitdiff | tree |
| 2006-08-30 |
amwaterhouse | User colours are case sensitive
|
commit | commitdiff | tree |
| 2006-08-29 |
amwaterhouse | Can shrink graph to zero
|
commit | commitdiff | tree |
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