| 2015-09-09 |
gmungoc | JAL-857 debug=true for Jmol example diagnosis
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commit | commitdiff | tree |
| 2015-09-09 |
gmungoc | JAL-857 added debug output to track down document base...
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commit | commitdiff | tree |
| 2015-09-09 |
gmungoc | JAL-1619 update applet.currentAlignFrame on any menu...
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commit | commitdiff | tree |
| 2015-09-09 |
gmungoc | JAL-1619 'align protein as cDNA' now leaves unmapped...
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commit | commitdiff | tree |
| 2015-09-08 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-09-08 |
gmungoc | JAL-1859 debug output of pdb mappings (mine and SSMs)
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commit | commitdiff | tree |
| 2015-09-08 |
gmungoc | JAL-1859 reverted to signed JalviewApplet.jar!
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commit | commitdiff | tree |
| 2015-09-08 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-09-08 |
gmungoc | JAL-1859 Jmol applet black background; fix _jvmols...
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commit | commitdiff | tree |
| 2015-09-07 |
gmungoc | JAL-1859 Jmol linked applet updated to use Jmol2.js
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commit | commitdiff | tree |
| 2015-09-07 |
gmungoc | JAL-1636 translate stop codon as '*', mouseover * as...
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commit | commitdiff | tree |
| 2015-09-07 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-09-07 |
gmungoc | JAL-1152 check 'autocalculated' not 'null sequenceRef...
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commit | commitdiff | tree |
| 2015-09-04 |
gmungoc | JAL-1859 jmolFindTarget not JmolFindTarget
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| 2015-09-04 |
gmungoc | JAL-1859 embedded Jmol applet example updated for Jmol...
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| 2015-09-03 |
gmungoc | JAL-1859 removed unneeded dependency on package not...
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commit | commitdiff | tree |
| 2015-09-03 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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| 2015-09-03 |
gmungoc | JAL-1690 scaleProteinAsCdna new optional attribute...
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| 2015-09-03 |
gmungoc | JAL-1828 lookup table to convert MSE to MET when parsing...
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commit | commitdiff | tree |
| 2015-09-03 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1544 spelling
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1355 User error text externalised to message bundle
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1768 set initial 'enabled' state for id width label...
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1264 test made i18n robust
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1768 enable fixed width output when auto-width...
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1843 fixed input/add from textbox; added @Override...
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1619 additions, standardised menu item symbols
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1681 mention of cDNA consensus added
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | JAL-1673 new test to verify transferRESNUMFeatures()
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commit | commitdiff | tree |
| 2015-09-02 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-09-01 |
gmungoc | JAL-1693 split frame opened for get xrefs, translate...
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commit | commitdiff | tree |
| 2015-09-01 |
gmungoc | JAL-1672 additional assertions added
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commit | commitdiff | tree |
| 2015-09-01 |
gmungoc | JAL-1355 user error message text externalised
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commit | commitdiff | tree |
| 2015-08-28 |
gmungoc | JAL-1836 temporary workaround for negative resNumIns...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1270 comments added regarding required remote service
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1759 updated unit test for removal of trim on Atom...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1830 tests relocated to AlignViewportTest after...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1627 updated expected tooltip text in unit test
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1830 unit tests for removing (or not) mappings...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1830 refactored so no jalview.gui references from...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-845 compacting duplicated code
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1611 debug sysout suppressed
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1544 message label corrected
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1701 help page for Split Frame view linked in
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1544 'Jalview' consistently capitalised
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| 2015-08-27 |
gmungoc | JAL-892 JAL-1764 Varna and Chimera also saved to project...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-892 saved to project; external help link updated
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1727 added EBI mirror of DAS registry
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1596 JAL-1725 JAL-1588 updates for selection in...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-27 |
gmungoc | JAL-1725 restrict Jalview's Jetty server to localhost
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1830 dropped reference counts for mappings, instead...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1596 check for null pointer (thread running after...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1270 test separated out of JalviewChimeraView
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1270 corrected path to test properties file
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1270 separated Jmol and Chimera tests to avoid...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1759 updated unit test for removal of trim of Atom...
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1840 correct setting status bar for structure mouseover
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1759 added check for null (console 'history')
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | Fix to use correct resource bundle entry
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commit | commitdiff | tree |
| 2015-08-26 |
gmungoc | JAL-1759 corrected syntax for 'atom picked' callback...
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commit | commitdiff | tree |
| 2015-08-25 |
gmungoc | JAL-1780 just a spelling change
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commit | commitdiff | tree |
| 2015-08-25 |
gmungoc | JAL-1674 more correct status bars in splitframe mouseover...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | JAL-1759 removed trim() of Atom.resNumIns as not backwards...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | JAL-845 error message on syserr if supplied files don...
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commit | commitdiff | tree |
| 2015-08-24 |
gmungoc | remove mentions of non-functional RNAInteraction colourscheme
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commit | commitdiff | tree |
| 2015-08-20 |
gmungoc | JAL-1833 added unit tests (some failing) for wrapToolitp
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commit | commitdiff | tree |
| 2015-08-19 |
gmungoc | JAL-1782 don't save TESTNG output summary to git
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commit | commitdiff | tree |
| 2015-08-19 |
gmungoc | JAL-1725 log to sysout when listener shuts down
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commit | commitdiff | tree |
| 2015-08-19 |
gmungoc | JAL-1742 suppress 'add chain' option for Jmol, pull...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1800 separated SearchResults.getCharacters() from...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1270 testIsMappable added
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1805 corrected javadoc only
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1829 JAL-1830 refactoring for correct mapping ...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1800 smarter matching when following mouseover...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1691 scan full width and depth of alignment for...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1800 SearchResults.equals() to allow smarter mouseover...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1551 updated to reflect changes to Eclipse preferences...
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commit | commitdiff | tree |
| 2015-08-17 |
gmungoc | JAL-1551 properties sorted (unchanged) for ease of...
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commit | commitdiff | tree |
| 2015-08-10 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-08-10 |
gmungoc | JAL-1516 indent multiple annotation parameters on new...
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commit | commitdiff | tree |
| 2015-07-15 |
gmungoc | JAL-1813 only pair up A-Z with a-z if annotation is RNA
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commit | commitdiff | tree |
| 2015-07-12 |
gmungoc | JAL-1759 corrected jmol applet lib name
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commit | commitdiff | tree |
| 2015-07-08 |
gmungoc | JAL-1759 merge from develop
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commit | commitdiff | tree |
| 2015-07-08 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2015-07-08 |
gmungoc | JAL-1598 replaced faulty regex, amended Varna call...
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1081 unit tests added
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1782 refactored test to ensure it passes in TestNG
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1421 generics used for leaner safer code
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1799 tweaked calculation for applet, now showing...
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commit | commitdiff | tree |
| 2015-07-06 |
gmungoc | JAL-1799 equivalent logic in applet
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commit | commitdiff | tree |
| 2015-07-03 |
gmungoc | JAL-1759 updated Jmol version in nbproject, install...
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commit | commitdiff | tree |
| 2015-07-03 |
gmungoc | JAL-892 jnlp, installAnywhere, build, licence references...
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commit | commitdiff | tree |
| 2015-07-03 |
gmungoc | Merge branch 'develop' into features/JAL-892varnaToProject
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commit | commitdiff | tree |
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