git://source.jalview.org
/
jalview.git
/ search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
JAL-2629 fix issue where HMM sequences would be too long
2017-05-31
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-31
Jim Procter
JAL-2418 release notes for JAL-2547, JAL-2563, JAL...
commit
|
commitdiff
|
tree
2017-05-31
Jim Procter
Merge branch 'JAL-2571' into develop
commit
|
commitdiff
|
tree
2017-05-31
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-31
Jim Procter
JAL-2398 - updated groovy script for direct field modification
commit
|
commitdiff
|
tree
2017-05-31
Jim Procter
JAL-2418 JAL-2563 release notes
commit
|
commitdiff
|
tree
2017-05-31
Jim Procter
JAL-2418 typo
commit
|
commitdiff
|
tree
2017-05-31
Jim Procter
Merge branch 'develop' into documentation/JAL-2418_release2102
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
Merge branch 'bug/JAL-2034contextchange' into develop
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2388 release notes
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2520 properly documented as a fixed bug in release...
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2465,JAL-2520,JAL-2533 release notes
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
Merge branch 'features/JAL-2465_No-mapping_Jmol-structures...
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2533 update javadoc
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2465 fixed groups for JmolViewerTest.testStructureLoadin...
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
Merge branch 'bug/JAL-2536' into develop
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2536 tweak javadoc wording
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2517 release notes
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
Merge branch 'bug/JAL-2517cancelAppletColour' into...
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
release notes
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2418 updated JABAWS server in what’s new
commit
|
commitdiff
|
tree
2017-05-29
Jim Procter
JAL-2491 JAL-2526 JAL-2566 JAL-2563 JAL-2547 release...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
Merge branch 'bug/JAL-2491' into develop
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
Merge branch 'bug/JAL-2547tooltipOnGap' into develop
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
Merge branch 'task/JAL-2562_SequenceI.findPosition...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
JAL-2563 failing test to verify SetStatus returns position...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
JAL-2563 test to verify SetStatus returns -1 so mouseOver...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
Merge branch 'task/JAL-2562_SequenceI.findPosition...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
JAL-2547 JAL-2562 rejig SetStatusMessage return value...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
Merge branch 'task/JAL-2562_SequenceI.findPosition...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
JAL-2526 test and documentation for SeqPanel.setStatus...
commit
|
commitdiff
|
tree
2017-05-27
Jim Procter
JAL-2562 javadoc TODO
commit
|
commitdiff
|
tree
2017-05-26
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-26
Jim Procter
JAL-2418 updated JPred documentation and screenshot...
commit
|
commitdiff
|
tree
2017-05-26
Jim Procter
JAL-2418 JAL-2549 JABAWS 2.2 release notes
commit
|
commitdiff
|
tree
2017-05-26
Jim Procter
Merge branch 'features/JAL-2549_updateJABAWSto220'...
commit
|
commitdiff
|
tree
2017-05-23
Jim Procter
JAL-2549 RNAAliFold result to annotation file roundtrip...
commit
|
commitdiff
|
tree
2017-05-23
Jim Procter
JAL-2549 skip ‘Unrecognised Service’ which resolves...
commit
|
commitdiff
|
tree
2017-05-23
Jim Procter
JAL-2549 replace JABAWS 2.1 with 2.2 client and remove...
commit
|
commitdiff
|
tree
2017-05-22
Jim Procter
JAL-2418 patch build - broken htsjdk import
commit
|
commitdiff
|
tree
2017-05-18
Jim Procter
Merge branch 'bug/JAL-2388_typeCheckAlignView.getUpdatedView...
commit
|
commitdiff
|
tree
2017-05-18
Jim Procter
JAL-2388 return empty hidden columns for fully visible...
commit
|
commitdiff
|
tree
2017-05-18
Jim Procter
JAL-2418 remove explicit test suite stats
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
Merge branch 'develop' into documentation/JAL-2418_release2102
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
Merge branch 'bug/JAL-2510amendFeatures' into develop
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
JAL-2447 add links to issues.jalview.org for experimental...
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
JAL-2447 experimental section in ‘Whats New’
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
JAL-2447 JAL-2295 JAL-2296 documenting as experimental...
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
Merge branch 'develop' into documentation/JAL-2418_release2102
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
Merge branch 'features/JAL-2447experimentalFlag' into...
commit
|
commitdiff
|
tree
2017-05-17
Jim Procter
JAL-2418 release notes
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
Merge branch 'documentation/JAL-2418_release2102' into...
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
JAL-2418 release notes
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
JAL-384 documentation on custom colours groovy examples
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
JAL-384 - groovy scripts for conserved/unconserved...
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
JAL-2418 release notes
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
JAL-2418 JAL-2316 added to new features
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
JAL-2316 tweaking docs and links in help
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
JAL-2418 release 2.10.2 release notes template
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
alternative patch for JAL-2339 readability in java...
commit
|
commitdiff
|
tree
2017-05-16
Jim Procter
Merge branch 'bug/JAL-2507_rnasecstrstockholm' into...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
JAL-2507 fix test: knockon from capitalisation on secondary...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
Merge branch 'bug/JAL-2507_rnasecstrstockholm' into...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
JAL-2311 disable and relocate Jared service tests to...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
JAL-2507 capitalisation for annotation lines generated...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
JAL-2507 case insensitive recognition of annotation...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
JAL-2507 - required callers to specify exact ignore...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
JAL-2535 quick hack to implement posterior probabilities...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
Merge branch 'features/JAL-2376_add-horizontal-bar...
commit
|
commitdiff
|
tree
2017-05-15
Jim Procter
JAL-2371 create a default ResidueShader when constructing...
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
Merge branch 'features/JAL-2435splitScreenFont' into...
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
JAL-2418 broken help ref
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
JAL-2435 documentation and what’s new
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
JAL-2435 mention new checkbox in linked cDNA/Protein...
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
JAL-2435 mirror antiAlias setting between cDNA and...
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
Merge branch 'features/JAL-2388OverviewWindow' into...
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
JAL-2388 mention overview popup in documentation
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
JAL-2388 checkbox in overview popup for applet
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
Merge branch 'features/JAL-2228_efficient_featurecounts...
commit
|
commitdiff
|
tree
2017-05-12
Jim Procter
JAL-2228 updated script in help docs, renamed docs...
commit
|
commitdiff
|
tree
2017-05-11
Jim Procter
Merge branch 'bug/JAL-2507_rnasecstrstockholm' into...
commit
|
commitdiff
|
tree
2017-05-11
Jim Procter
JAL-2509 JAL-2507 allow whitespace in GS annotation...
commit
|
commitdiff
|
tree
2017-05-11
Jim Procter
JAL-2507 JAL-2509 allow whitespace==null for annotation...
commit
|
commitdiff
|
tree
2017-05-11
Jim Procter
JAL-2507 test if an annotation is ‘whitespace’
commit
|
commitdiff
|
tree
2017-05-11
Jim Procter
JAL-2507 Annotation.EMPTY_ANNOTATION - non-null whitespace...
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2507 spit out tests for ‘{‘ WUSS io from ‘[‘ WUSS...
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2509 verify stockholm parser’s bracket regex is...
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2509 extend set of brackets recognised by stockholm...
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2507 JAL-2509 extend test to cover round trip of...
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2507 unpaired RNA marked as ‘ ‘ in Stockholm SS...
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2507 output secondary structure regardless of presence...
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2507 simplify round trip test via AppletFormatAdapter
commit
|
commitdiff
|
tree
2017-05-09
Jim Procter
JAL-2507 test for alignment+rna annotation -> Stockholm...
commit
|
commitdiff
|
tree
2017-05-04
Jim Procter
Merge branch 'develop' into features/JAL-2228_efficient_feat...
commit
|
commitdiff
|
tree
2017-05-04
Jim Procter
Merge branch 'bug/JAL-2507_rnasecstrstockholmoutput...
commit
|
commitdiff
|
tree
2017-05-04
Jim Procter
Merge branch 'features/JAL-2503_filteronquantitativeannotati...
commit
|
commitdiff
|
tree
next