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2005-05-19	amwaterhouse	new libraries for XML binding	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	returns name if given colourscheme	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	A Flauss reccommends	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	A Flauss recommends	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	A flauss recommendations	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	filechooser has multiple filters	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	loading/saving changes	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	changes to jalviewfilechooser	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	% identity is consensus	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	no need for right mouse click	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	Load and Save State added	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	dont show redundant menuitems	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	load in gap symbol	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	block edit bug fixed	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	maintain original threshold value	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	changes to JalviewFileChooser	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	new class	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	calculate max and min for graph	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	release version	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	Copied sequences title altered	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	remove redundant menuitems	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	remove actionevents	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	group editing bug fixed	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	toString () method added	commit \| commitdiff \| tree
2005-05-19	amwaterhouse	Created by Castor	commit \| commitdiff \| tree
2005-05-12	amwaterhouse	conservation removed	commit \| commitdiff \| tree
2005-05-12	amwaterhouse	separator added	commit \| commitdiff \| tree
2005-05-12	amwaterhouse	corrections for find when edit takes place	commit \| commitdiff \| tree
2005-05-11	amwaterhouse	JalviewApplet jbuilder project	commit \| commitdiff \| tree
2005-05-11	amwaterhouse	output newick to textbox	commit \| commitdiff \| tree
2005-05-11	amwaterhouse	reads in treeFile from applet parameter	commit \| commitdiff \| tree
2005-05-09	amwaterhouse	paintComponent. not paint	commit \| commitdiff \| tree
2005-05-09	amwaterhouse	correct conservation errors after edit	commit \| commitdiff \| tree
2005-05-09	amwaterhouse	if imgWidth <0	commit \| commitdiff \| tree
2005-05-06	amwaterhouse	wrap align correction for last row	commit \| commitdiff \| tree
2005-05-06	amwaterhouse	add 1 to fastPaint, in case seqs of different length	commit \| commitdiff \| tree
2005-05-06	amwaterhouse	if clustal + edit, make new clustal	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	pdb end seq and startseq determined here	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	colour by sequence just about works	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	Accelerator on menu takes care of actionkey	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	saveAs .....	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	saveAsNewick	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	moved to jalview.io	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	new place for sequencefeaturefetcher	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	send rotCanvas sequence and viewport	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	pdbfile details not essential to sequence	commit \| commitdiff \| tree
2005-05-05	amwaterhouse	addelement replaces add	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	added remark about right mouse in awt	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	validate and repaint after changing panels	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	mouse listeners added	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	renderer removed	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	no need to send pid, seqnum	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	SequenceRenderer changes	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	no need to send vector pid or seqnum	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	No need for this interface	commit \| commitdiff \| tree
2005-05-04	amwaterhouse	Applet files	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	formatAdapter.formatSequences and maintain annotation...	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	formatAdapter.formats	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	formatAdapter.readFile	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	change Container to Component	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	formatAdapter.formats, remove redundant code	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	1.1 compatible, formatting changes	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	FormatAdapter readFile	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	1.1 compatible	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	findKmers and fetchSequenceFeatures removed	commit \| commitdiff \| tree
2005-05-03	amwaterhouse	Removed as obfuscation of classes wiill change class...	commit \| commitdiff \| tree
2005-04-29	amwaterhouse	selects default colour	commit \| commitdiff \| tree
2005-04-29	amwaterhouse	just tidying up unused imports	commit \| commitdiff \| tree
2005-04-29	amwaterhouse	REad in defaultColour	commit \| commitdiff \| tree
2005-04-29	amwaterhouse	preferences held statically	commit \| commitdiff \| tree
2005-04-29	amwaterhouse	preferences moved to desktop	commit \| commitdiff \| tree
2005-04-29	amwaterhouse	read in preferences at start up	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	no longer used	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	Label changes as AF recommended	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	must set consensus in child colourscheme	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	Updated for use by preferences panel	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	GUI changes	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	Preferences panel added	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	Viewport now looks at preferences when loading up	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	Set fullscreen if in preferences	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	can search ids	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	set as default added	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	search ids added	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	Menu names changed	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	JInternalFrame is within class. Method to load default...	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	Preferences panel added	commit \| commitdiff \| tree
2005-04-28	amwaterhouse	set gap char modified	commit \| commitdiff \| tree
2005-04-25	amwaterhouse	if applet, load properties in void init	commit \| commitdiff \| tree
2005-04-25	amwaterhouse	+1 in fastpaint sends coloured text outofbounds	commit \| commitdiff \| tree
2005-04-25	amwaterhouse	dont update overview every repaint	commit \| commitdiff \| tree
2005-04-25	amwaterhouse	Loading alignment threaded	commit \| commitdiff \| tree
2005-04-25	amwaterhouse	Syncronize drawPanel, as overviewpanel is threaded	commit \| commitdiff \| tree
2005-04-25	amwaterhouse	Overviewpanel allows for large alignments	commit \| commitdiff \| tree
2005-04-21	amwaterhouse	add consslider to palette layer	commit \| commitdiff \| tree
2005-04-21	amwaterhouse	Allow for clipped region when printing	commit \| commitdiff \| tree
2005-04-21	amwaterhouse	Tick 5 and 10 marks	commit \| commitdiff \| tree
2005-04-21	amwaterhouse	Printing changes	commit \| commitdiff \| tree
2005-04-21	amwaterhouse	update conSlider when colour changes	commit \| commitdiff \| tree
2005-04-21	amwaterhouse	Allow for -open arg	commit \| commitdiff \| tree
2005-04-19	amwaterhouse	no need to keep setting selected, its on the palette...	commit \| commitdiff \| tree
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