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JAL-3193 defensive trim of URL read from properties file
2018-11-08
gmungoc
JAL-1889 unit test tweaks for running on server
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2018-10-25
gmungoc
JAL-3143 unit tests updated for code changes!
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2018-10-25
gmungoc
JAL-3143 comma-delimited feature attributes for alleles,
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2018-10-25
gmungoc
JAL-3143 fetch Ensembl(Genomes) features as JSON not GFF
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2018-10-23
gmungoc
JAL-3139 check group visibility when removing 'redundant...
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2018-10-08
gmungoc
JAL-1244 comments, javadoc, method signature tweaks
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2018-10-08
gmungoc
JAL-1244 editSequence extract method refactoring
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2018-10-05
gmungoc
JAL-1244 improved status message for insert/delete gap
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2018-10-04
gmungoc
JAL-3132 status message for sequence and/or graph group...
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2018-10-04
gmungoc
JAL-1244 no status message (yet) for locked edit of...
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2018-10-04
gmungoc
JAL-1244 status message for insert/delete gaps on single...
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2018-10-04
gmungoc
JAL-1244 status message while dragging a stretch group
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2018-10-04
gmungoc
JAL-3132 set status message when over sequence id or...
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2018-10-04
gmungoc
JAL-3093 unit tests, no mouse action over left/right...
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2018-10-03
gmungoc
JAL-3093 tweaks to code and test for 3px gap above...
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2018-10-02
gmungoc
JAL-3093 unit tests for SeqPanel.findMousePosition
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2018-10-02
gmungoc
JAL-3093 limited Consensus popup menu when in wrapped...
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2018-10-02
gmungoc
JAL-3093 added MousePos.isOverAnnotation() for extra...
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2018-10-01
gmungoc
JAL-3093 'read-only' annotations when in wrapped mode
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2018-10-01
gmungoc
JAL-3093 refactor (+test) Annotation Labels tooltip...
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2018-10-01
gmungoc
JAL-3093 unit tests for finding annotation row index...
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2018-10-01
gmungoc
JAL-3093 show annotation tooltips and status message...
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2018-09-28
gmungoc
JAL-3063 service param files read/saved using JAXB...
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2018-09-28
gmungoc
JAL-3063 top level element added to JalviewWsParamSet.xsd
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2018-09-28
gmungoc
JAL-3063 comments re use of xjc to generate Java binding...
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2018-09-27
gmungoc
JAL-2791 refactored Export Features to apply all visibility...
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2018-09-27
gmungoc
JAL-2791 new method to test if feature fails colour...
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2018-09-27
gmungoc
JAL-2791 method that tests all conditions for feature...
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2018-09-26
gmungoc
JAL-3125 tidy up
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2018-09-26
gmungoc
JAL-3125 avoid slider 'rounding' threshold field value
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2018-09-24
gmungoc
JAL-3063 tidy commented out code
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2018-09-21
gmungoc
JAL-3063 wrappers with check for null getting optional...
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2018-09-21
gmungoc
JAL-3120 preserve feature colour/mincolour/maxcolour...
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2018-09-20
gmungoc
JAL-2843 tweaks to help text for filters
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2018-09-20
gmungoc
JAL-2843 help text for colour by attribute, feature...
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2018-09-19
gmungoc
JAL-3120 preserve plain colour value when changing...
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2018-09-19
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2018-09-19
gmungoc
JAL-3063 use JAXB for 'Save as Project' and load project...
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2018-09-19
gmungoc
JAL-3063 unit test for save/load project switched to...
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2018-09-18
gmungoc
JAL-3063 Save/Load user defined colours using JAXB
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2018-09-18
gmungoc
JAL-3063 Save/Load user colour scheme using JAXB
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2018-09-18
gmungoc
JAL-3063 top level element added to colours schema...
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2018-09-18
gmungoc
JAL-3063 New View via JAXB
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2018-09-18
gmungoc
JAL-3063 temporary extra menu option to save/load project...
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2018-09-18
gmungoc
JAL-3063 first version of Jalview2XML using JAXB to...
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2018-09-18
gmungoc
JAL-3063 JAXB binding classes generated by xjc from...
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2018-09-18
gmungoc
JAL-3063 tweak schema so JAXB tool xjc recognises XML...
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2018-09-18
gmungoc
JAL-3063 tweak schema so JAXB generates enums for enumerated...
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2018-09-17
gmungoc
JAL-3116 test method renamed to match code
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2018-09-17
gmungoc
JAL-3116 unit tests adapted to EMBL over JAXB
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2018-09-14
gmungoc
JAL-3116 parse EMBL XML with JAXB (todo: update unit...
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2018-09-13
gmungoc
JAL-3116 Uniprot XML unmarshalled using JAXB not Castor
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2018-09-12
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2018-09-12
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2018-09-12
gmungoc
JAL-1551 reinstated Save actions
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2018-09-10
gmungoc
JAL-3099 use Alignment.getVisibleWidth() where wanted
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2018-09-10
gmungoc
JAL-3099 new method AlignmentI.getVisibleWidth()
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2018-09-10
gmungoc
JAL-3097 adjust viewport width on hiding columns
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2018-09-10
gmungoc
JAL-3108 fix concurrency bug in Reveal action handler
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2018-09-03
gmungoc
Merge branch 'trialMerge' into releases/Release_2_10_5_Branch
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2018-09-03
gmungoc
JAL-3076 fetch Ensembl sequence as JSON instead of...
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2018-08-31
gmungoc
JAL-3003 remove redundant call to drawSelectionGroup
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2018-08-16
gmungoc
JAL-3082 one more test condition
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2018-08-16
gmungoc
JAL-3082 handle regex error, exclusive threshold, unit...
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2018-08-15
gmungoc
JAL-3080 remove tree partition if no groups created
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2018-08-14
gmungoc
JAL-3078 reset Tree font (only!) on Cancel
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2018-08-10
gmungoc
JAL-3018 updated to Ensembl REST 7.0
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2018-08-10
gmungoc
JAL-3076 refactor for more efficient scan of 'gene...
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2018-08-10
gmungoc
JAL-3076 fetch Ensembl sequence as JSON instead of...
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2018-07-25
gmungoc
JAL-3073 select columns if dragging sideways in a graph...
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2018-07-25
gmungoc
JAL-3074 don't scroll up/down on drag out of scale...
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2018-07-25
gmungoc
JAL-3072 SeqPanel.stopScrolling on mouse up in scale...
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2018-07-03
gmungoc
JAL-3054 table tooltip follow mouse in a sensible manner
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2018-06-29
gmungoc
JAL-3049 removed wrong way to set tooltip
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2018-06-29
gmungoc
JAL-3049 JAL-2069 colour icon tooltip including by...
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2018-06-29
gmungoc
JAL-3049 working tooltip on colours column
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2018-06-07
gmungoc
JAL-2755 correct Javadoc and error handling
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2018-06-07
gmungoc
JAL-2920 format/comment tidy
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2018-06-07
gmungoc
JAL-2920 wrap description in <html/> if it includes...
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2018-06-07
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' of https...
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2018-06-06
gmungoc
JAL-2920 unit tests for 3 or more original or variant...
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2018-06-06
gmungoc
JAL-3013 ensure Chimera as a symlink gets resolved
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2018-06-04
gmungoc
JAL-2808 update test for revised treatment of 'mixed...
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2018-06-04
gmungoc
JAL-3019 correctly form toRange of 'traversed' MapList
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2018-06-04
gmungoc
JAL-3018 updated REST versions to 6.3
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2018-05-31
gmungoc
JAL-2808 don't capture or report min-max for mixed...
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2018-05-31
gmungoc
JAL-2808 pre-fill numeric inequality filter with min...
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2018-05-28
gmungoc
Merge branch 'bug/JAL-797' into develop
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2018-05-28
gmungoc
Merge remote-tracking branch 'origin/releases/Release_2_10_4...
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2018-05-25
gmungoc
JAL-3002 don't use fastPaint for page up/down
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2018-05-25
gmungoc
JAL-2992 simpler heuristic for available height
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2018-05-25
gmungoc
JAL-2995 tooltip on fields with double-click to browse...
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2018-05-25
gmungoc
JAL-2994 temporary patch with paths to Chimera for...
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2018-05-24
gmungoc
JAL-2997 additional tests
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2018-05-23
gmungoc
JAL-2993 AlignFrame listen for keystrokes in OverviewPanel
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2018-05-23
gmungoc
JAL-2997 unit test
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2018-05-23
gmungoc
JAL-2997 handle tab-delimited trailing column number...
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2018-05-21
gmungoc
JAL-797 Cmd-W act WHEN_IN_FOCUSED_WINDOW
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2018-05-21
gmungoc
JAL-2920 use HGVS notation for protein variant feature
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2018-05-21
gmungoc
JAL-437 remove code duplicated by merge
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