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2006-02-03	amwaterhouse	Conservation colouring does what it should always have...	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Make java 1.1 compatible	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Slight adjustments	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Fetch sequence(s)	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Java 1.1 compatible	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Many changes	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Save and load graph type	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Max size is 100 for conservation	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Retrieves PFAM alignments	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Slightly bigger for Mac	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Tooltip for multiple graph lines updated	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	set index of new annotation	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Allow for non graph annotations in combobox	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Reading features files readded as ref to FeatureRenderer...	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	has ref to annotation	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Add annotation with sequence ref updated	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Reads annotation files	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Applet draws line graphs	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Applet reads in annotation files	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	AA properties added	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	AA Properties	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	New images	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Updated images	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	removed	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Removed	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Cancel button is now close button	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Dont draw origin beyond end of alignment	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	No need for apply button, just update colours when...	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Get min and max colour added	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Can be used for annotation colouring	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Faster paint	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Use Antialias flag	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Smooth fonts added	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Null sequence check	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Monospaced indicator	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Unix drag and drop implemented	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	GraphGroups added	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Fast paint update	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Anti alias flag	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Drop annotations onto alignment	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Smooth fonts, annotation Colour	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Smooth font option	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	AddAnnotation with start index	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	New Class	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	New files	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Faster painting	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Allow features in overview window	commit \| commitdiff \| tree
2006-01-30	amwaterhouse	Allow embedded applet	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Check for null StringBuffer in getPDB	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Check for null StringBuffer in getPDB	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Jar file 20% smaller	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Reduced jar size by 20%	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Allow embedded applet	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	graph now has type, not a boolean	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Watch for trim left/right null widths	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	REGEX CANNOT BE STATIC	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Wrapped search scrolls to visible result	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Remove import	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Annotations.Graph can be bargraph, linegraph	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Remove printPoints	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Remove main method	commit \| commitdiff \| tree
2005-12-22	amwaterhouse	Load assocated tree	commit \| commitdiff \| tree
2005-12-15	amwaterhouse	Close body and html, dont put in table	commit \| commitdiff \| tree
2005-12-15	amwaterhouse	Prevents confusing extra line being output in Java...	commit \| commitdiff \| tree
2005-12-15	amwaterhouse	SetMenuBar(null) when closing frames. Prevents a bug...	commit \| commitdiff \| tree
2005-12-13	amwaterhouse	Broken link fixed	commit \| commitdiff \| tree
2005-12-13	amwaterhouse	Broken link fixed	commit \| commitdiff \| tree
2005-12-13	amwaterhouse	Version update	commit \| commitdiff \| tree
2005-12-13	amwaterhouse	Builds web TOC for help files	commit \| commitdiff \| tree
2005-12-13	amwaterhouse	Link to applets.html	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Applet new features	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Remove unused mappings	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	GetAlignment uses active alignment window	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Inlude mcview in build applet	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Change dataset name	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Change title	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Release date	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	DOnt mention WSWublast for now	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Jbinit	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Font size label	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Dont bother with WSWUBlast for now	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	FOnt size -3 for labels	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Check if user cancelled before making image	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Set font italic	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Font changes on export png/eps	commit \| commitdiff \| tree
2005-12-12	amwaterhouse	Getmask is slightly wider	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Change order of repaint if wrapped	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Applet Structure viewer has all colours available	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Can be used by PDBViewer	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	All colours added to Structure viewer	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Only load the tree file once, for first alignment	commit \| commitdiff \| tree
2005-12-09	amwaterhouse	Keylistener added to frame and seqcanvas	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	If dataset seq exists for paste to existing alignment...	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Should call deselectAll when escape pressed	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Dont repaint if component has been removed	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	SeqColoursReady	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	Clustal colour added to table	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	SeqColoursReady boolean added	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	UnknownSequences.remove moved out of loop	commit \| commitdiff \| tree
2005-12-08	amwaterhouse	showAnnotation state loaded	commit \| commitdiff \| tree
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