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JAL-2348 JAL-2349 make contact maps non-editable so their display height can be adjusted
2016-06-21
Jim Procter
JAL-2089 cleared out old ‘What’s new’
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2016-06-21
Jim Procter
JAL-192 JAL-1369 release notes
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2016-06-21
Jim Procter
Merge branch 'features/JAL-1369_refseqproject' into...
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2016-06-21
Jim Procter
JAL-1369 make sure desktop is cleared before test starts
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2016-06-21
Jim Procter
JAL-1369 jalview2xml tests need to be run sequentially
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2016-06-21
Jim Procter
JAL-1369 mark reference sequence & view state and restore it
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2016-06-21
Jim Procter
JAL-1369 project XML efficiency TODO
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2016-06-21
Jim Procter
JAL-1369 dead code TODO?
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2016-06-21
Jim Procter
JAL-1369 ensure *real* alignment’s metadata written...
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2016-06-21
Jim Procter
JAL-1369 fix the test
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2016-06-21
Jim Procter
JAL-1369 make sure the fake AlignmentI produced by...
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2016-06-21
Jim Procter
JAL-1369 HUGE WARNING: datamodel.HiddenSequences is...
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2016-06-20
Jim Procter
JAL-1369 updated project schema - flag on JSeq to mark...
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2016-06-20
Jim Procter
JAL-1369 failing test
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2016-06-20
Jim Procter
JAL-1989 JAL-1011 release notes
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2016-06-20
Jim Procter
JAL-2086 JAL-2085 release notes
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2016-06-20
Jim Procter
Merge branch 'develop' of http://source.jalview.org...
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2016-06-20
Jim Procter
JAL-2065 release notes
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2016-06-20
Jim Procter
Merge branch 'bugs/JAL-2065' into develop
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2016-06-20
Jim Procter
JAL-2065 port patch to applet
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2016-06-20
Jim Procter
JAL-1551 tidy
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2016-06-20
Jim Procter
JAL-1551 tidy
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2016-06-20
Jim Procter
JAL-2065 don’t pass stale group reference
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2016-06-20
Jim Procter
JAL-2068 avoid ArrayIndexOutOfBounds when consensus...
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2016-06-20
Jim Procter
JAL-2065 check position lies within group before getting...
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2016-06-20
Jim Procter
Merge branch 'develop' into features/JAL-2068groovyAnnotatio...
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2016-06-20
Jim Procter
Merge branch 'r291_docs' into develop
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2016-06-20
Jim Procter
JAL-1812 groovy always present
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2016-06-20
Jim Procter
JAL-1812 release notes
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2016-06-20
Jim Procter
JAL-1812 documentation TBC for AlignFrame->Calculate...
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2016-06-20
Jim Procter
JAL-2089 typo
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2016-06-20
Jim Procter
JAL-1868 fix typo in test data.
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2016-06-20
Jim Procter
Merge branch 'features/JAL-1812_JAL-2083_groovyBinding...
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2016-06-20
Jim Procter
Merge branch 'develop' into features/JAL-1812_JAL-2083_groov...
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2016-06-20
Jim Procter
JAL-2110 pass dataset to makeCDSalignment
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2016-06-20
Jim Procter
JAL-2110 catch case when updateDBRef argument has null...
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2016-06-20
Jim Procter
JAL-2110 List now used for AlignCodonFrame references
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2016-06-20
Jim Procter
JAL-2110 copy alcodonframes only if copy constructor...
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2016-06-19
Jim Procter
JAL-2110 distinct alignedcodonframe entries for tests
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2016-06-19
Jim Procter
JAL-2110 test alcodonframes must be distinct
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2016-06-19
Jim Procter
JAL-2110 JAL-2131 JAL-1765 remove reference to jalview...
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2016-06-16
Jim Procter
tests for validating start-end number/sequence length...
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2016-06-16
Jim Procter
JAL-2110 todo - select mappings involving sequences...
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2016-06-16
Jim Procter
JAL-2110 change test for desired behaviour of getCodonFrame()
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2016-06-16
Jim Procter
JAL-2110 equals and hashcode should check fromSeq
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2016-06-16
Jim Procter
JAL-2110 throw implementation error if not given a...
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2016-06-16
Jim Procter
JAL-2110 typo caused infinite loop
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2016-06-15
Jim Procter
Merge branch 'develop' into features/JAL-2110_crossRefDuplic...
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2016-06-10
Jim Procter
Merge branch 'r291_docs' into develop
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2016-06-10
Jim Procter
JAL-2089 docs for June 10th
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2016-06-10
Jim Procter
JAL-2089 signed off bug release notes
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2016-06-10
Jim Procter
JAL-1941 remove improper test tag from Annotate3D test...
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2016-06-10
Jim Procter
JAL-2089 documenting for 8th june RC1
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2016-06-10
Jim Procter
JAL-1941 added test URL and notes about PyRNA restclient
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2016-06-10
Jim Procter
JAL-1941 Annotate3d tests should be in network group
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2016-06-02
Jim Procter
JAL-2125 remove SHA256 digest manifest and signatures...
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2016-06-02
Jim Procter
JAL-2125 remove SHA256 digest manifest and signatures...
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2016-06-01
Jim Procter
Merge branch 'testfix/JAL-2038' into develop
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2016-06-01
Jim Procter
JAL-2038 fix tests for case insensitive eSequenceIdMatcher
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2016-06-01
Jim Procter
JAL-2038 ensure bare Strings are lowercased before...
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2016-06-01
Jim Procter
Merge branch 'apifix/JAL-1926_JAL-2106' into develop
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2016-06-01
Jim Procter
fix build
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2016-05-31
Jim Procter
Merge branch 'apifix/JAL-1926_JAL-2106' into develop
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2016-05-31
Jim Procter
JAL-1551 JAL-2106 javadoc
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2016-05-31
Jim Procter
JAL-2110 abstract methods should never reference their...
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2016-05-31
Jim Procter
Merge branch 'features/JAL-2113_emblXml1.2' into develop
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2016-05-31
Jim Procter
Merge branch 'develop' into features/JAL-2113_emblXml1.2
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2016-05-31
Jim Procter
Merge branch 'jims/291patches' into develop
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2016-05-30
Jim Procter
JAL-553 JAL-1557 always send selections after triggering...
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2016-05-30
Jim Procter
JAL-1557 allow group associated rows to be used to...
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2016-05-30
Jim Procter
JAL-2077 release notes
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2016-05-30
Jim Procter
JAL-2077 fix: convenience method and checks for CMD...
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2016-05-30
Jim Procter
JAL-1551 formatting
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2016-05-30
Jim Procter
JAL-2089 update release date for 2.9.1
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2016-05-30
Jim Procter
Merge branch 'develop' into efficiency/JAL-2034_JAL...
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2016-05-30
Jim Procter
JAL-1552 fix JAL-2122 resolve File->string before adding...
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2016-05-26
Jim Procter
JAL-2030 - add servlet-api-3.1.jar to installAnywhere...
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2016-05-26
Jim Procter
Merge branch 'develop' of http://source.jalview.org...
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2016-05-26
Jim Procter
JAL-2121 refactor todo
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2016-05-26
Jim Procter
JAL-2089 update developer doc
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2016-05-26
Jim Procter
Merge branch 'develop' of http://source.jalview.org...
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2016-05-26
Jim Procter
JAL-1400 JAL-2089 allow configurable signature algorithms
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2016-05-26
Jim Procter
JAL-1551 formatting
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2016-05-26
Jim Procter
JAL-1552 refactor shared dataflavor hander
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2016-05-26
Jim Procter
JAL-1552 extra debug logging for dataflavor if drop...
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2016-05-25
Jim Procter
JAL-1522 patch - try to pick best text dataflavor
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2016-05-06
Jim Procter
Merge branch 'features/JAL-192_scalerelativetoseq'...
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2016-05-06
Jim Procter
JAL-192 fix javadoc
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2016-05-06
Jim Procter
JAL-192 JAL-2099 unused variables
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2016-05-06
Jim Procter
JAL-1551 formatting
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2016-05-06
Jim Procter
JAL-192 JAL-2099 reuse refactored scale code for wrapped...
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2016-05-06
Jim Procter
JAL-192 JAL-2099 factored out calculation from rendering...
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2016-05-06
Jim Procter
JAL-192 JAL-2099 factored out calculation from rendering...
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2016-05-06
Jim Procter
JAL-192 JAL-2099 factored out calculation from rendering...
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2016-05-06
Jim Procter
JAL-2100 centre triangles on hidden column vertical...
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2016-05-06
Jim Procter
JAL-2100 optimisation
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2016-05-06
Jim Procter
JAL-2100 triangles shown below in jvdesktop unwrapped...
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2016-05-06
Jim Procter
JAL-192 patch off-by-one for pathological gap case
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2016-05-05
Jim Procter
JAL-192 patch for off-by one and pathological case...
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2016-05-04
Jim Procter
Revert "JAL-2074 removed xerces to explore wierdness"
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