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2006-04-04	amwaterhouse	set current tree once the tree is prepared	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Jalview2XML does not use static load	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Pad gaps removes excess gaps	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Specify com.stevesoft.pat.Regex	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Autocalculate consensus	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	More keys for editing	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Get hiddenBoundaryLeft and right	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Jalview2XML does not use static load anymore	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Disable hide regions	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Scrolls if dragged off the screen	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Keyboard editing	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Cursor colour	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Set current tree when ready	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Allows loading of archive XML	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	For archive only	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Uses descriptors	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Binding with descriptors	commit \| commitdiff \| tree
2006-04-04	amwaterhouse	Namespace changes	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Feature settings	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Has its own featureRenderer	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Group colours not used	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Associated Data menu item	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Cursor added	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Typo	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	fr.transferSettings	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	FeatureSettings bug fixed	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Feature added to group search results	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Groups compatibility	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	No need to hava SSX as array	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	CursoMode added	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Load data file added	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Trim line	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Features added to group Uniprot	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Add check if sequence already exists	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	FeaturesGroup added to constructor	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	1 too many	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Features added to group search results	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	-1 +1 check removed	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	1 too many in drawgraph	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Annotation colour scheme added	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Called from AnnotationColourChooser and Feature Settings	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Annotation colours added to applet	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	ZSort no longer static	commit \| commitdiff \| tree
2006-03-24	amwaterhouse	Has own featurerenderer	commit \| commitdiff \| tree
2006-03-20	amwaterhouse	Rearranged text	commit \| commitdiff \| tree
2006-03-20	amwaterhouse	Correct reference	commit \| commitdiff \| tree
2006-03-20	amwaterhouse	typo	commit \| commitdiff \| tree
2006-03-20	amwaterhouse	Reference added	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Fix for Finn Drablos bug. Must use equals for comparing...	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	historyItem.restore	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	HideSequences	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	getWidth and getHeight just once	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	-1 to drawGraphs	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	isVisible and hiddenboundary added	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	UserColors not used here	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Hidden Rows	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Reveal	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Faster	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Hide Sequences	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Tooltip for hidden columns	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Hidden column adjustments	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Scrolls when editing	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Gethidden sequences	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	HiddenSequence methods	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	getHiddenSequences	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Keeps a record of hidden sequences	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Allow loading from Zip files	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Load tree	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	CandP takes AlignFrame, not applet	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Fastpaint updates	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Check endres when drawing graphs	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Cut and paste may be inserted into Dialog frame	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Fastest implementation so far	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Extra argument false	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Scroll implemented for applet editing	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Selection Group rendering updated	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Reduced arguments for speed	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Can be used for user features	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Add new feature from seqrch results	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Feature rendering in groups	commit \| commitdiff \| tree
2006-03-16	amwaterhouse	Out of bounds check	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Sequences can have a description	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Features may belong to a feature group	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	IdentifyFile should not be static	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Can read from zip file	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Blank space is white	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Reveal All added	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	<= fastPaints hidden columns	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Check for visibleGroup==null	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	IdentfyFile should not be static	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	RevealAllHiddenColumns	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Allow for hidden columns	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Able to read resources from Zip file	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Blank space is white	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	PASTE is constant in AppletFormatAdapter	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Pack resources in Zip file	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	P1 changed to N1	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Add Annotation to specific sequence	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Cannot delete residues	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features now array	commit \| commitdiff \| tree
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