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2006-03-08	amwaterhouse	Check for visibleGroup==null	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	IdentfyFile should not be static	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	RevealAllHiddenColumns	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Allow for hidden columns	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Able to read resources from Zip file	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Blank space is white	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	PASTE is constant in AppletFormatAdapter	commit \| commitdiff \| tree
2006-03-08	amwaterhouse	Pack resources in Zip file	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	P1 changed to N1	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Add Annotation to specific sequence	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Cannot delete residues	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features now array	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Keeps original threshold value	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	setShowSequenceFeatures	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	First attempt at hidden regions	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Less args, faster rendering	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features now an array	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	First attempt to install hidden regions	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Use add seq feature instead of replacing existing features	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features added	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features now array for speed of rendering	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Use add feature instead of replacing existing values	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features now array	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Use annotation colour for graph	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Make variable public for speed of rendering	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features are now an array, not vector	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Typo	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Record of featuresDisplayed	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Inform user of groups error parsing	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Drawpanel needs fewer args	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Feature text mouse over modified	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	If overview, residues are gray	commit \| commitdiff \| tree
2006-02-24	amwaterhouse	Features are an array, rendering is faster	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	translate cDNA adjusted	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Dont colour gaps	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Read startgroup and endgroup in features file	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Incorporated threshold slider	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	SliderPanel removed	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	FeatureGroups added	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	ShowSeqFeatures selected	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Save featureGroup	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Use featureGroups from featureRenderer	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	No longer used for annotation gradient	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Fetch Sequence Features menu added	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Use original colour scheme as base for annotation colouring	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Allows saving of sequence description	commit \| commitdiff \| tree
2006-02-16	amwaterhouse	Typo	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Dont use FeatureFetcher if nucleotide	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Threshold single element	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Add new Feature	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Set as feature, not new group	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Saves and loads sequence description	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Keeps up to date with featureRenderer	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Threshold is single element	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	if shift down bug fixed	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	No more supergroup, set Sequence name / Description	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	New FEature replaces new group	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Threshold is a single element	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	SetThreshold replaces addGraphLine	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	FeatureGroups added	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Removed SuperGroup	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Save sequence description in VAMSAS sequence	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Check description and status are not null in mouse...	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Keeps up to date with features	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Feature replaces new superGroup	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Feature Groups added	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Graphline is a single line	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	Features file has startgroup, endgroup	commit \| commitdiff \| tree
2006-02-15	amwaterhouse	No longer used	commit \| commitdiff \| tree
2006-02-13	amwaterhouse	Missing brace	commit \| commitdiff \| tree
2006-02-13	amwaterhouse	Parsing features file - dont adjust for alignment position	commit \| commitdiff \| tree
2006-02-10	amwaterhouse	Update overview if features updated	commit \| commitdiff \| tree
2006-02-10	amwaterhouse	Overview displays features	commit \| commitdiff \| tree
2006-02-09	amwaterhouse	Removed file	commit \| commitdiff \| tree
2006-02-09	amwaterhouse	Feature Settings added to Applet	commit \| commitdiff \| tree
2006-02-09	amwaterhouse	If conservation is zero, colour is white	commit \| commitdiff \| tree
2006-02-09	amwaterhouse	Drop target must initialise sequences	commit \| commitdiff \| tree
2006-02-09	amwaterhouse	New implementation for holding search results	commit \| commitdiff \| tree
2006-02-08	amwaterhouse	parseResult takes the title as string. usually null	commit \| commitdiff \| tree
2006-02-08	amwaterhouse	Make URL input window bigger	commit \| commitdiff \| tree
2006-02-08	amwaterhouse	FormatAdapter throws exception	commit \| commitdiff \| tree
2006-02-08	amwaterhouse	Check endRes	commit \| commitdiff \| tree
2006-02-08	amwaterhouse	Copy dataset annotations for paste(this)	commit \| commitdiff \| tree
2006-02-08	amwaterhouse	Colour above or below threshold	commit \| commitdiff \| tree
2006-02-08	amwaterhouse	Report invalid chars	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Added graphtype	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Graphtype added	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Conservation colouring does what it should always have...	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Make java 1.1 compatible	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Slight adjustments	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Fetch sequence(s)	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Java 1.1 compatible	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Many changes	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Save and load graph type	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Max size is 100 for conservation	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Retrieves PFAM alignments	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Slightly bigger for Mac	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Tooltip for multiple graph lines updated	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	set index of new annotation	commit \| commitdiff \| tree
2006-02-03	amwaterhouse	Allow for non graph annotations in combobox	commit \| commitdiff \| tree
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