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JAL-3112 Use classgraph to reconstruct the classpath for launching Jalview
2018-09-11 Jim ProcterJAL-3112 Use classgraph to reconstruct the classpath...
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2018-09-11 Jim ProcterJAL-3111 drop hts-1.33 as a dependency (in favour of...
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2018-09-11 Jim ProcterMerge branch 'releases/Release_2_11_Branch' into merge...
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2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch
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2018-09-09 Jim ProcterJAL-3091 changed release date to 10th September - tweaked...
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2018-09-09 Jim ProcterJAL-3106 normalise extension before checking if it...
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2018-09-07 Jim ProcterJAL-3107 update any group associated annotation rows...
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2018-09-07 Jim ProcterJAL-2988 JAL-2968 renamed patched VAqua5 to VAqua5...
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2018-09-07 Jim ProcterJAL-2988 if selected file is null (On Java 10/OSX ...
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2018-09-07 Jim ProcterJAL-2988 workaround: overload getSelectedFile() because...
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2018-09-07 Jim ProcterJAL-3106 use .jvp as default
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2018-09-07 Jim ProcterJAL-3105 fix for focus transfer after window closed...
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2018-09-06 Jim ProcterJAL-3091 code committed in error (failed patch for...
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2018-09-06 Jim ProcterJAL-3091 release notes for JAL-3104
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2018-09-06 Jim ProcterJAL-3105 reallocate quality and consensus annotation...
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2018-09-06 Jim ProcterJAL-2854 compute visible annotation panel height and...
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2018-09-05 Jim ProcterJAL-3065 don’t quote class path args for Runtime.exec...
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2018-09-05 Jim ProcterJAL-3091 update whats new!
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2018-09-05 Jim ProcterJAL-3091 update Java 10 known issues/workarounds in...
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2018-09-05 Jim ProcterJAL-3091 known defect in whats new for Java 10 issues...
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2018-09-05 Jim ProcterJAL-3091 add Ben Soares to authors list and switch...
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2018-09-05 Jim ProcterJAL-3091 release notes for updated memory settings
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2018-09-05 Jim ProcterJAL-3091 release notes
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2018-09-05 Jim ProcterJAL-3101 increase default heap size in IA and JNLP...
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2018-09-05 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988...
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2018-09-05 Jim ProcterJAL-2988 update InstallAnywhere install dependencies...
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2018-09-05 Jim ProcterMerge branch 'bug/JAL-3076ensemblGeneId' into develop
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2018-09-05 Jim ProcterJAL-3091 release date set for Thursday 6th September
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2018-09-05 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception_nogroovysett...
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2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7f6417...
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2018-09-04 Jim ProcterJAL-3091 JAL-2988 release notes re Java 10 and OSX
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2018-09-03 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988...
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2018-09-03 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of http...
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2018-09-03 Jim ProcterJAL-3091 -Dnosign to disable jar signing phase of build
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2018-09-03 Jim ProcterJAL-3091 -Dnosign to disable jar signing phase of build
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2018-09-03 Jim ProcterJAL-3091 release notes and whats new !
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2018-09-03 Jim ProcterJAL-3065 release notes
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2018-09-03 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception' into...
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2018-09-03 Jim ProcterJAL-3076 clarify javadoc handling single sequence response...
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2018-09-03 Jim ProcterJAL-3087 release notes
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2018-08-31 Jim ProcterJAL-3095 account for sequence start when highlighting...
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2018-08-31 Jim ProcterJAL-3053 JAL-3061 JAL-3095 release notes
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2018-08-31 Jim ProcterMerge branch 'bug/JAL-3061_RNA_secondary_structure_annotatio...
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2018-08-31 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of http...
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2018-08-31 Jim ProcterJAL-3095 release notes
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2018-08-31 Jim Procterjava doc and fix for JAL-3095 - region of trimmed RNA...
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2018-08-30 Jim ProcterJAL-3092 release notes
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2018-08-30 Jim ProcterJAL-3092 make sure base pair counter is always moved...
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2018-08-29 Jim ProcterJAL-3091 release notes for JAL-3003 JAL-3059
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2018-08-28 Jim ProcterJAL-3003 different coloured borders in demo annotation...
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2018-08-28 gmungocJAL-3059 use correct border colour for groups
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2018-08-28 gmungocJAL-3003 draw selection group outline on main graphics...
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2018-08-28 Jim ProcterJAL-247 release notes
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2018-08-28 gmungocJAL-247 comment to clarify wrapped print algorithm
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2018-08-28 gmungocJAL-247 print/export wrapped uses common code to draw...
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2018-08-28 gmungocJAL-3087 include full alignment height in repeating...
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2018-08-28 gmungocJAL-247 draw/print sequence ids now uses common code...
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2018-08-28 Jim ProcterJAL-3091 release 2.10.5 added to release notes
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2018-08-22 Jim ProcterJAL-2988 workaround for jalview save as dialogs - clear...
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2018-08-22 Jim ProcterJAL-2988 JAL-2976 update to latest VAqua release: VAqua5
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2018-08-01 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into...
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2018-08-01 Jim ProcterMerge branch 'task/JAL-3047_clover2104b1_cherrypick...
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2018-08-01 Jim ProcterJAL-3047 don't set classes unconditionally (forgot...
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2018-08-01 Jim ProcterJAL-3047 don’t let the makedist task complete if a...
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2018-08-01 Jim ProcterJAL-3047 ‘cloverclasses’ build directory for instrumented...
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2018-08-01 Jim ProcterJAL-3047 enable clover for testng
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2018-08-01 Jim ProcterJAL-3047 ignore clover output dir
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2018-07-19 Jim ProcterMerge branch 'task/JAL-3047_clovercoverage' into develop
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2018-07-19 Jim ProcterJAL-3047 don't set classes unconditionally (forgot...
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2018-07-12 Jim ProcterMerge branch 'develop' of http://source.jalview.org...
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2018-07-02 Jim ProcterMerge branch 'task/JAL-3047_clovercoverage' into develop
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2018-07-02 Jim ProcterJAL-3047 don’t let the makedist task complete if a...
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2018-07-02 Jim ProcterJAL-3047 ‘cloverclasses’ build directory for instrumented...
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2018-06-27 Jim ProcterJAL-3047 enable clover for testng
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2018-06-27 Jim ProcterJAL-3047 ignore clover output dir
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2018-06-27 Jim ProcterJAL-3047 ant -Dclover.jar=../path/to/clover/lib/clover...
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2018-06-26 Jim ProcterMerge branch 'task/JAL-3042_remove_SimpleDocument_dependency...
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2018-06-26 Jim ProcterJAL-3042 remove mention of adjustable search box history...
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2018-06-26 Jim ProcterJAL-3042 don't allow user to change default history...
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2018-06-26 Jim ProcterJAL-3035 removed jdas in libs documentation and noted...
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2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency...
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2018-06-26 Jim ProcterJAL-3035 documentation in 2.11 release notes (and 2...
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2018-06-26 Jim ProcterJAL-3035 remove DAS UI documentation
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2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency...
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2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more !
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2018-06-26 Jim ProcterJAL-3035 (unrelated) random XML error in nbbuild.xml
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2018-06-07 Jim ProcterJAL-3009 release notes
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2018-06-07 Jim ProcterMerge branch 'bugs/JAL-3009_blockingNetworkThreads...
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2018-06-07 Jim ProcterJAL-2999 what's new and tweak release notes order
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2018-06-06 Jim ProcterJAL-2999 refine release notes
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2018-06-06 Jim ProcterJAL-2999 release 2.10.4b1 on Thursday (promise!)
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2018-06-06 Jim ProcterJAL-2920 release notes
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2018-06-06 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into...
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2018-06-06 Jim ProcterJAL-2920 revised TODO for JAL-3025
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2018-06-06 Jim ProcterJAL-2920 don’t output variant/original sequence as...
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2018-06-06 Jim ProcterJAL-2920 JAL-3017 uniprot XML schema included in mappings doc
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2018-06-06 Jim ProcterJAL-1920 JAL-3017 use newline not <br/> in description...
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2018-06-05 Jim ProcterJAL-3009 news reader thread should be in background...
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2018-06-05 Jim ProcterJAL-3009 Identifiers.Org retrieval on background thread.
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2018-06-04 Jim ProcterJAL-3017 parse multiple variant elements for uniprot...
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