| 2005-05-09 |
amwaterhouse | correct conservation errors after edit
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commit | commitdiff | tree |
| 2005-05-09 |
amwaterhouse | if imgWidth <0
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commit | commitdiff | tree |
| 2005-05-06 |
amwaterhouse | wrap align correction for last row
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commit | commitdiff | tree |
| 2005-05-06 |
amwaterhouse | add 1 to fastPaint, in case seqs of different length
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commit | commitdiff | tree |
| 2005-05-06 |
amwaterhouse | if clustal + edit, make new clustal
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | pdb end seq and startseq determined here
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | colour by sequence just about works
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | Accelerator on menu takes care of actionkey
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | saveAs .....
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | saveAsNewick
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | moved to jalview.io
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | new place for sequencefeaturefetcher
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | send rotCanvas sequence and viewport
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | pdbfile details not essential to sequence
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commit | commitdiff | tree |
| 2005-05-05 |
amwaterhouse | addelement replaces add
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | added remark about right mouse in awt
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | validate and repaint after changing panels
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | mouse listeners added
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | renderer removed
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | no need to send pid, seqnum
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | SequenceRenderer changes
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | no need to send vector pid or seqnum
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | No need for this interface
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commit | commitdiff | tree |
| 2005-05-04 |
amwaterhouse | Applet files
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | formatAdapter.formatSequences and maintain annotation...
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | formatAdapter.formats
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | formatAdapter.readFile
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | change Container to Component
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | formatAdapter.formats, remove redundant code
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | 1.1 compatible, formatting changes
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | FormatAdapter readFile
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | 1.1 compatible
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | findKmers and fetchSequenceFeatures removed
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commit | commitdiff | tree |
| 2005-05-03 |
amwaterhouse | Removed as obfuscation of classes wiill change class...
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commit | commitdiff | tree |
| 2005-04-29 |
amwaterhouse | selects default colour
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commit | commitdiff | tree |
| 2005-04-29 |
amwaterhouse | just tidying up unused imports
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commit | commitdiff | tree |
| 2005-04-29 |
amwaterhouse | REad in defaultColour
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commit | commitdiff | tree |
| 2005-04-29 |
amwaterhouse | preferences held statically
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commit | commitdiff | tree |
| 2005-04-29 |
amwaterhouse | preferences moved to desktop
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commit | commitdiff | tree |
| 2005-04-29 |
amwaterhouse | read in preferences at start up
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | no longer used
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | Label changes as AF recommended
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | must set consensus in child colourscheme
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | Updated for use by preferences panel
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | GUI changes
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | Preferences panel added
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | Viewport now looks at preferences when loading up
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | Set fullscreen if in preferences
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | can search ids
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | set as default added
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | search ids added
|
commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | Menu names changed
|
commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | JInternalFrame is within class. Method to load default...
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | Preferences panel added
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commit | commitdiff | tree |
| 2005-04-28 |
amwaterhouse | set gap char modified
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commit | commitdiff | tree |
| 2005-04-25 |
amwaterhouse | if applet, load properties in void init
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commit | commitdiff | tree |
| 2005-04-25 |
amwaterhouse | +1 in fastpaint sends coloured text outofbounds
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commit | commitdiff | tree |
| 2005-04-25 |
amwaterhouse | dont update overview every repaint
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commit | commitdiff | tree |
| 2005-04-25 |
amwaterhouse | Loading alignment threaded
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commit | commitdiff | tree |
| 2005-04-25 |
amwaterhouse | Syncronize drawPanel, as overviewpanel is threaded
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commit | commitdiff | tree |
| 2005-04-25 |
amwaterhouse | Overviewpanel allows for large alignments
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commit | commitdiff | tree |
| 2005-04-21 |
amwaterhouse | add consslider to palette layer
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commit | commitdiff | tree |
| 2005-04-21 |
amwaterhouse | Allow for clipped region when printing
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commit | commitdiff | tree |
| 2005-04-21 |
amwaterhouse | Tick 5 and 10 marks
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commit | commitdiff | tree |
| 2005-04-21 |
amwaterhouse | Printing changes
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commit | commitdiff | tree |
| 2005-04-21 |
amwaterhouse | update conSlider when colour changes
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commit | commitdiff | tree |
| 2005-04-21 |
amwaterhouse | Allow for -open arg
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commit | commitdiff | tree |
| 2005-04-19 |
amwaterhouse | no need to keep setting selected, its on the palette...
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commit | commitdiff | tree |
| 2005-04-19 |
amwaterhouse | add splash to palette layer
|
commit | commitdiff | tree |
| 2005-04-19 |
amwaterhouse | Printing of trees corrected. Antialiasing on
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | painting syncronized, spin increments in units, not...
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | wrap alignment box paints correctly
|
commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | blosum62 must have its on consensus
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | setendres -1
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | position of bioinformatics
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | set PNG antialiasing on
|
commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | show sliders when first selecting conservation,PID
|
commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | dont drag beyond end of alignment
|
commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | selected group draws last residue
|
commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | repaint removed
|
commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | fastPaint modified incase scroll is more than page...
|
commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | calls fontChanged
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commit | commitdiff | tree |
| 2005-04-18 |
amwaterhouse | fontChanged method added, componentListener removed
|
commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | make sure we draw last line of wrapped alignment
|
commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | allow for final line of alignment
|
commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | fix wrap alignment vscroll visible amount
|
commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | check if colourscheme is null
|
commit | commitdiff | tree |
| 2005-04-16 |
amwaterhouse | AlignPanel RefreshPanels put into paintComponent
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | clustalx exception in colourchange
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | no longer used
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | consensus held in residueColour
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | no need to send consensus
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | takes on methods previously in desktop
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | no need to send consensus everytime
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | pid and conservation changes
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | adjust annotation panel height when font changed
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | pid and conservation slider moved to sliderPanel
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | fontmetrics must be obtained after font change
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | draw graph label lower down
|
commit | commitdiff | tree |
| 2005-04-15 |
amwaterhouse | public vconsensus available for PID and Blosum
|
commit | commitdiff | tree |
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