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Merge branch 'develop' into features/JAL-4219_extended_fasta_rna_ss
2024-06-06
Jim Procter
Merge branch 'develop' into features/JAL-4219_extended_fasta...
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2024-06-06
Jim Procter
Merge branch 'bug/JAL-4421_customise_volume_name_of_DMG_inst...
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2024-06-04
Jim Procter
Merge branch 'improvement/JAL-4409_implement_extra_schemes_i...
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2024-06-04
Jim Procter
JAL-4409 don't ignore gitignore !
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2024-06-04
Jim Procter
JAL-4418 first development release for 2.11.4.0 - release...
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2024-06-04
Jim Procter
Merge branch 'feature/JAL-4159_pasimap' into develop
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2024-06-04
Jim Procter
Merge branch 'releases/Release_2_11_3_Branch' into...
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2024-05-24
Jim Procter
JAL-4159 fix up test for applicable filters for pasimap
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2024-05-24
Jim Procter
JAL-4159 fix PairwiseAlignmentPanelTest - reinstate...
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2024-05-24
Jim Procter
JAL-4159 peek in a Jalview project's PCA viewer's title...
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2024-05-24
Jim Procter
JAL-4257 JAL-4159 JAL-789 tidy up passing of score...
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2024-05-24
Jim Procter
Merge branch 'jims/feature/JAL-4159_pasimap' into feature...
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2024-05-24
Jim Procter
Merge branch 'features/JAL-4257_adjustablegapparams_nw...
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2024-05-23
Jim Procter
JAL-4159 fix sense of console/alignment output suppression...
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2024-05-23
Jim Procter
JAL-4159 disable the score model combo box when pasimap...
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2024-05-21
Jim Procter
JAL-4259 set title using original alignment window...
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2024-05-21
Jim Procter
JAL-4159 implement bounds for PASIMAP calculation ...
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2024-05-21
Jim Procter
JAL-4159 connectivity should be computed for the sequences...
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2024-05-21
Jim Procter
JAL-4159 PASiMap currently doesn't support different...
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2024-05-21
Jim Procter
JAL-4159 sometimes the progress bar may not be available...
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2024-05-21
Jim Procter
Merge branch 'feature/JAL-4159_pasimap' into spike...
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2024-05-21
Jim Procter
JAL-4356 release date for 2.11.3.3 is 22nd May 2025
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2024-05-21
Jim Procter
JAL-4356 release date for 2.11.3.3 is 22nd May 2025
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2024-05-16
Jim Procter
JAL-4356 release notes for JAL-3978 patch
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2024-05-16
Jim Procter
JAL-4356 release notes for JAL-3978 patch
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2024-05-16
Jim Procter
Merge branch 'bug/JAL-3978_copy_bin_dir_to_getdownArchiveBui...
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2024-05-16
Jim Procter
JAL-4418 bump release to 2.11.4.0
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2024-05-16
Jim Procter
Merge branch 'develop' into feature/JAL-4159_pasimap
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2024-05-16
Jim Procter
Merge branch 'feature/JAL-4386_calculate_tree_using_secondar...
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2024-05-16
Jim Procter
Merge branch 'develop' into feature/JAL-4386_calculate_tree_...
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2024-05-16
Jim Procter
Merge branch 'develop' into releases/Release_2_11_3_Branch
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2024-05-16
Jim Procter
JAL-4356 bump release date to today, release notes...
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2024-05-15
Jim Procter
Merge branch 'bug/JAL-4416_sview_not_shown_for_local_strucfi...
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2024-05-15
Jim Procter
JAL-4416 TODO for fixing JAL-4415 JAL-3124 - need a...
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2024-05-15
Jim Procter
JAL-4416 ensure the structure view is shown and any...
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2024-05-15
Jim Procter
JAL-4416 make sure the structure viewer is actually...
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2024-05-15
Jim Procter
Merge branch 'bug/JAL-4407_no_sec_str_from_draganddrop_to_ms...
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2024-05-14
Jim Procter
Merge branch 'develop' into releases/Release_2_11_3_Branch
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2024-05-14
Jim Procter
JAL-4356 fix release note
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2024-05-14
Jim Procter
Merge branch 'develop' into releases/Release_2_11_3_Branch
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2024-05-14
Jim Procter
JAL-4356 set release date to Weds 15th May and update...
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2024-05-13
Jim Procter
Merge branch 'develop' into releases/Release_2_11_3_Branch
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2024-05-13
Jim Procter
JAL-4356 JAL-518 JAL-4413 release notes
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2024-05-13
Jim Procter
Merge branch 'features/JAL-518_justify_seqs_in_region...
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2024-05-13
Jim Procter
JAL-518 better test coverage and support for case preservation
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2024-05-13
Jim Procter
JAL-518 failing test for case preservation on justify
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2024-05-13
Jim Procter
Merge branch 'develop' into features/JAL-518_justify_seqs_in...
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2024-05-13
Jim Procter
JAL-4413 timeouts Merge branch 'improvement/JAL-4217_added_a...
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2024-05-13
Jim Procter
Merge branch 'develop' into features/JAL-518_justify_seqs_in...
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2024-05-10
Jim Procter
JAL-4411 fix typo :(
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2024-05-10
Jim Procter
JAL-4411 store class of provider in PDBEntry
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2024-05-01
Jim Procter
JAL-4407 don't transfer 'local' settings - leave as...
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2024-05-01
Jim Procter
JAL-4407 failing test checking for secondary structure...
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2023-10-02
jprocter
JAL-4090 more JAL-3858 docs
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2023-10-02
jprocter
Merge branch 'develop' into doc/JAL-4090_Release_2_11_3_0
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2022-03-04
Jim Procter
JAL-3746 JAL-3811 document SHOW_JWS2_SERVICES user...
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2022-03-04
Jim Procter
JAL-3746 JAL-3812 new argument ‘-nohtmltemplates’ and...
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2022-03-04
Jim Procter
JAL-3746 JAL-3813 NOIDENTIFIERSSERVICE preference disables...
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2022-03-04
Jim Procter
JAL-3746 JAL-3814 don’t automatically launch the news...
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2022-03-04
Jim Procter
JAL-3746 JAL-3814 NONEWS property
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2021-09-17
Jim Procter
JAL-1260 FileFormat entry for EMBL/GENBANK: TODO: create...
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2021-09-16
Jim Procter
JAL-3794 X and N are counted as DNA characters, but...
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2021-09-16
Jim Procter
JAL-3794 new test for recognition of protein or DNA...
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2021-09-14
Jim Procter
JAL-3815 default /etc/jalview_properties under utils...
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2021-08-30
Jim Procter
JAL-3829 forgot to add in the dummy 3d-beacons db proxy
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2021-06-09
Jim Procter
JAL-3840 don’t update the modal residue count for gaps
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2021-06-09
Jim Procter
fixes JAL-3840
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2021-06-09
Jim Procter
JAL-3840 failing test - show that addGaps overflows
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2021-06-09
Jim Procter
JAL-3842 2.11.1.5 what’s new, release notes, and version...
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2021-06-09
Jim Procter
Merge branch 'patch/JAL-3840_2_11_1_4' into releases...
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2021-06-09
Jim Procter
JAL-3840 don’t update the modal residue count for gaps
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2021-06-09
Jim Procter
fixes JAL-3840
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2021-06-09
Jim Procter
JAL-3840 failing test - show that addGaps overflows
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2021-04-06
Jim Procter
JAL-3832 dummy 3d-beacons database client and code...
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2021-03-15
Jim Procter
Merge branch 'releases/Release_2_11_1_Branch'
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2021-03-09
Jim Procter
JAL-3816 release date updated to 9th March
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2021-03-05
Jim Procter
JAL-3816 release date set for 8th March and updated...
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2021-03-05
Jim Procter
JAL-3816 new known defects JAL-3705 and JAL-3806
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2021-03-04
Jim Procter
Revert "Merge branch 'bug/JAL-3806_mappingCoversSequence...
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2021-03-04
Jim Procter
Revert "JAL-3816 release notes for JAL-3806"
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2021-02-26
Jim Procter
JAL-3816 release notes for JAL-3806
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2021-02-26
Jim Procter
Merge branch 'bug/JAL-3806_mappingCoversSequence' into...
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2021-02-26
Jim Procter
JAL-3816 JAL-3814 JAL-3813 JAL-3812 JAL-3811 JAL-3818...
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2021-02-24
Jim Procter
Merge branch 'bug/JAL-3818_jmolDeadlock' into releases...
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2021-02-24
Jim Procter
Merge branch 'releases/Release_2_11_1_4_debianpatches...
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2021-02-17
Jim Procter
JAL-3821 patch for 2.11.2 to retrieve RNA ENA records...
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2021-02-17
Jim Procter
Merge branch 'feature/JAL-3692enaEndpoint' into patch...
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2021-02-07
Jim Procter
JAL-3816 bump version number and cut release notes
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2021-02-07
Jim Procter
JAL-3815 default /etc/jalview_properties under utils...
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2021-02-05
Jim Procter
Merge branch 'task/JAL-3521_Slimmed_down_build.gradle_for_de...
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2021-02-05
Jim Procter
Merge branch 'releases/Release_2_11_1_4_debianpatches...
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2021-02-05
Jim Procter
JAL-3814 don’t automatically launch the news browser...
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2021-02-05
Jim Procter
JAL-3813 NOIDENTIFIERSSERVICE preference disables jalview...
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2021-02-05
Jim Procter
JAL-3812 new argument ‘-nohtmltemplates’ and user preference...
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2021-02-05
Jim Procter
JAL-3811 document SHOW_JWS2_SERVICES user preference...
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2021-02-05
Jim Procter
JAL-3814 NONEWS property
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2020-11-13
Jim Procter
JAL-3757 JAL-3689 use AppletFormat.checkProtocol to...
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2020-10-29
Jim Procter
Merge branch 'releases/Release_2_11_1_Branch'
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2020-10-29
Jim Procter
JAL-3766 what’s new and release notes for 2.11.1.3
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2020-10-29
Jim Procter
JAL-3759 fix compilation error for test
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