| 2005-11-17 |
amwaterhouse | Hidden tabs and vamsas refs for beta release
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Initial col is light gray
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Graphics must be set from nullFrame
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | No more isOverview
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | If overview is visible, update it
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | no more show translation
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Hide Tab settings for build
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Use setRGB rather than color, fillrect
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Move start and end before parsing name
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Hide vamsas settings for build
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Now outputs features and groups, and wrapped alignment...
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Optimized Overview
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Use stringbuffer, not string+
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Remove system.out
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Highlight doesnt use offset
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Don't initialise a char in findIndex
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Don't set chain colours in hashtable
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Highlight from alignment
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | No more myAtom, Highlight from alignment
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | no need for myAtom
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Parsing updates
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Not used
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Keep all public methods
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | No radio buttons in applet
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Dont use this yet
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Dont use myGraphics
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Removed
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Graphical bits moved into files to save jar size
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Removed to reduce jar size
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Modifications for Applet PDB viewer
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Add getAlignment function
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Modifications for Applet PDB
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Fix bug where all chains are called A
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Applet PDB viewer
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Catch exceptions
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Use shortname
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | getShortName
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | findByShortName
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Dont add sequence group at the moment
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | No new PDBViewer
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | Last chance, is the sequence without id?
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | SequenceFetcher new class
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | AddPdbEntry added
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | PNG and EPS in ImageMaker
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Allow featuresettings to be enabled on load
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Add mousewheel listener
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | REmove system.out
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | AlignSeq takes printstream as arg
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Add mapping details to stringbuffer
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | OnlyAddPDBEntries
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Set PDBViewer
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Use Antialiasing
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | PDB implementation updated
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | If selectionGroup is null, return
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Return accurate RGB for transparent residues
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Make cancelled public variable
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | getDbRef
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Get and set PDBEntrys
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | PDB is now PDBEntry
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Use StringBUffer instead of String
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Colour PDB by sequence
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | PDM mapping
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Rot Canvas replaced with PDBViewer
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Mapping to PDB added
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commit | commitdiff | tree |
| 2005-11-08 |
amwaterhouse | jalview mapping
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commit | commitdiff | tree |
| 2005-11-08 |
amwaterhouse | Preliminary storeJalview
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commit | commitdiff | tree |
| 2005-11-08 |
amwaterhouse | getVersion added for Castor mapping
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Id parsing moved to Sequence
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | REmove system.out
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Show full id
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Display full id in trees
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Use visible id for sorting
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Load and save Feature Colour Settings
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Java 1.5 bug note
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Allow residue prefix to dataset
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Only add first Id to suggestedIds
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Add jvsuffix and dbref to menu
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | 2CdbPrefix true by default
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Output jvsuffix, dbref
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commit | commitdiff | tree |
| 2005-11-01 |
amwaterhouse | Inform user about visual alignment, not dataset updates
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commit | commitdiff | tree |
| 2005-11-01 |
amwaterhouse | Wrap long description in table
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commit | commitdiff | tree |
| 2005-11-01 |
amwaterhouse | Label changes
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commit | commitdiff | tree |
| 2005-11-01 |
amwaterhouse | Show JVSuffix
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commit | commitdiff | tree |
| 2005-11-01 |
amwaterhouse | disulfide bond exceptions
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commit | commitdiff | tree |
| 2005-11-01 |
amwaterhouse | New schema, new objects
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commit | commitdiff | tree |
| 2005-11-01 |
amwaterhouse | Adjust seq limits for visual and dataset sequences
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | dbPrefix and jvsuffix added
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | getDisplayId changed
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | jalviewClipboard added
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | Display only selected features
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | DBPrefix and JVSuffix added
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | FeatureRenderer doenst use groups
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | Sequence.getDatasetSequence().getFeatures
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | Use fontmetrics to tidy up display
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | Prompt before blasting
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | equalsIgnoreCase CLUSTAL
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | Catch numberformatexceptions
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | Accession and name unbounded
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | DisplayId can be dbref and or jvsuffix
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commit | commitdiff | tree |
| 2005-10-31 |
amwaterhouse | Find by displayid not used
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commit | commitdiff | tree |
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