git://source.jalview.org / jalview.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
Debug message associated with TODO for JAL-1136 - re-enable dynamic recalculation...
2012-08-07 jprocterDebug message associated with TODO for JAL-1136 - re...
commit | commitdiff | tree
2012-08-07 jprocterJAL-975 JAL-1137 debug messages for web service client...
commit | commitdiff | tree
2012-08-05 jprocterJAL-1131 - todos for later versions
 commit | commitdiff | tree
2012-08-05 jprocterJAL-1131 ensure new dataset sequence is created if...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 Ensure asynchronously calculated autoannotation...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 JAL-811 JAL-812 store/recover autocalc alignment...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 fix logic for recovering AACons params
 commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 store ws-parameter list as XML element content...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 allow parameter sets to be transferred across...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 less code-dependent formula for creating server...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1136 - fix abstraction for parameter container...
commit | commitdiff | tree
2012-08-03 jprocterJAL-1115 reference to List<SequenceI> passed in 'alignment...
commit | commitdiff | tree
2012-08-02 jprocterJAL-976 better logging/error reporting for disorder...
commit | commitdiff | tree
2012-08-02 jprocterJAL-976 JAL-958 todo list for release
 commit | commitdiff | tree
2012-08-01 jprocterJAL-976 ensure protein disorder services appears in...
commit | commitdiff | tree
2012-08-01 jprocterJAL-976 don't clear menu out before adding jabaws services...
commit | commitdiff | tree
2012-08-01 jprocterJAL-1066 patch regression ac33424148b2a4de29b3ca43f941162e8b...
commit | commitdiff | tree
2012-07-08 jprocterdocumentation for PCA calculation parameters and reset...
commit | commitdiff | tree
2012-07-08 jproctera209409239 (JAL-976 - add support for storing service...
commit | commitdiff | tree
2012-07-08 jprocterJAL-976 clean out associated annotation
 commit | commitdiff | tree
2012-07-08 jprocterJAL-976 implement additional calcId method
 commit | commitdiff | tree
2012-07-08 jprocterJAL-976 simpler parameter update model
 commit | commitdiff | tree
2012-07-08 jprocterJAL-961 JAL-976 allow access to service URI for parameter...
commit | commitdiff | tree
2012-07-08 jprocterJAL-961 JAL-976 recover current settings from associated...
commit | commitdiff | tree
2012-07-08 jprocterJAL-976 pick an available instance of a service based...
commit | commitdiff | tree
2012-07-08 jprocterbugfix - use currently held parameters
 commit | commitdiff | tree
2012-07-08 jprocterJAL-976 - storing service parameters on the view model
 commit | commitdiff | tree
2012-07-06 jprocterJAL-976 test if the sliders have been modified from...
commit | commitdiff | tree
2012-07-06 jprocterunique URI for service type
 commit | commitdiff | tree
2012-07-06 jprocterJAL-961 JAL-976 abstracted container for dynamic calculation...
commit | commitdiff | tree
2012-07-06 jproctertidy imports
 commit | commitdiff | tree
2012-07-06 jprocterJAL-976 - add support for storing service parameter...
commit | commitdiff | tree
2012-07-03 jprocterJAL-961 allow calcId to be specified independently...
commit | commitdiff | tree
2012-07-03 jprocterJAL-974 - broken copy of feature settings
 commit | commitdiff | tree
2012-07-02 jprocterJAL-1129 progress bar - this patch doesn't provide...
commit | commitdiff | tree
2012-07-02 jprocterJAL-968 incremental - PNG/EPS output has annotation...
commit | commitdiff | tree
2012-07-02 jproctertidy imports
 commit | commitdiff | tree
2012-07-02 jprocterJAL-974 create graduated feature colours for annotation...
commit | commitdiff | tree
2012-07-02 jprocterJAL-974 - use refactored methods on AlignmentPanel
 commit | commitdiff | tree
2012-07-02 jprocterJAL-974 - refactor FeatureRenderer constructor to AlignmentP...
commit | commitdiff | tree
2012-07-01 jprocterJAL-1117 alleviate lock starvation
 commit | commitdiff | tree
2012-07-01 jprocterensure all annotation dependent rendering gets refreshed
 commit | commitdiff | tree
2012-06-29 jprocterJAL-1065 JAL-1066 ensure non-residue based schemes...
commit | commitdiff | tree
2012-06-29 jprocterJAL-1065 JAL-1066 allow different lookup tables for...
commit | commitdiff | tree
2012-06-26 jprocterJAL-899 added groovy support to develop branch
 commit | commitdiff | tree
2012-06-20 jprocterformatting
 commit | commitdiff | tree
2012-06-19 jprocterJAL-976 JAL-975 JAL-1119 - pass on any existing parameters...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 JAL-1119 - prototype adjustable AACons parameters...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 - doh! valid result if width matches *ungapped...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 - bespoke AACons settings object to save current...
commit | commitdiff | tree
2012-06-19 jprocterpatch for JAL-1172 ensure option's default value is...
commit | commitdiff | tree
2012-06-19 jprocterJAL-961 JAL-975 extend api to support removal of workers...
commit | commitdiff | tree
2012-06-19 jprocterJAL-975 - ensure we only submit ungapped, padded alignment...
commit | commitdiff | tree
2012-06-15 jprocterformatting
 commit | commitdiff | tree
2012-06-15 jprocterJAL-1125 option to switch between Jalview and SeqSpace...
commit | commitdiff | tree
2012-06-15 jprocterfix JAL-1122
 commit | commitdiff | tree
2012-06-15 jprocterJAL-1123 - make clear where off-by-one error was occuring...
commit | commitdiff | tree
2012-06-15 jprocterJAL-535 - refactored core PCA viewer code to viewmodel
 commit | commitdiff | tree
2012-06-15 jprocterJAL-535 refactored core code from PCA viewer to viewmodel.
 commit | commitdiff | tree
2012-06-15 jprocterJAL-1120 patch for desktop
 commit | commitdiff | tree
2012-06-15 jprocterpatch for JAL-1121 - reset button and slightly wider...
commit | commitdiff | tree
2012-06-15 jprocterJAL-535 refactoring todo
 commit | commitdiff | tree
2012-06-15 jprocterExtended IProgressIndicator with method to check if...
commit | commitdiff | tree
2012-06-15 jprocterMerge branch 'JAL-1013_pca_rna_dna' into develop
 commit | commitdiff | tree
2012-06-14 jprocterJAL-975 JAL-1002 ensure custom parameters are actually...
commit | commitdiff | tree
2012-06-14 jprocterJAL-1115 - synchronized access to group list
 commit | commitdiff | tree
2012-06-14 jprocterJAL-976 - make sure annotation panel is updated to...
commit | commitdiff | tree
2012-06-14 jprocterJAL-961 JAL-976 kill any existing AACon job if a new...
commit | commitdiff | tree
2012-06-14 jprocterJAL-1003 visual delay when running a sequence or alignment...
commit | commitdiff | tree
2012-06-14 jprocterJAL-961 JAL-976 tweaked way that AACons client is registered...
commit | commitdiff | tree
2012-06-14 jprocterformatting
 commit | commitdiff | tree
2012-06-14 jprocterformatting
 commit | commitdiff | tree
2012-06-14 jprocterJAL-1118 - hack to try and get rid of flicker. consider...
commit | commitdiff | tree
2012-06-14 jprocterJAL-1118 WIP - flag to mark if image buffer has just...
commit | commitdiff | tree
2012-06-14 jprocterJAL-1115 trap exception arising from race condition...
commit | commitdiff | tree
2012-06-14 jprocterJAL-968 javadoc and return flag indicating if any of...
commit | commitdiff | tree
2012-06-14 jprocterJAL-961 ensure we only add one instance of a worker...
commit | commitdiff | tree
2012-06-14 jprocterJAL-961 potentially helpful println statements when...
commit | commitdiff | tree
2012-06-13 jprocterJAL-1115 refactor base collection for Alignment from...
commit | commitdiff | tree
2012-06-13 jprocterJAL-1116 - location where vamsas sync failure occurs
 commit | commitdiff | tree
2012-06-13 jprocterjavatidy
 commit | commitdiff | tree
2012-06-12 jprocterJAL-1115 refactor reordering code operating directly...
commit | commitdiff | tree
2012-06-12 jprocterJAL-1115 refactor base collection for Alignment from...
commit | commitdiff | tree
2012-06-12 jprocterJAL-1115 - use local reference for annotation row
 commit | commitdiff | tree
2012-06-12 jprocterJAL-961, JAL-1115 - pending test to ensure only one...
commit | commitdiff | tree
2012-06-07 jprocterjavatidy
 commit | commitdiff | tree
2012-06-07 jprocterJAL-967, JAL-1114, JAL-1115 more concurrent access...
commit | commitdiff | tree
2012-06-07 jprocterjavatidy
 commit | commitdiff | tree
2012-06-07 jprocterfix for bug introduced with commit:b81d4d7d46ea8b1c89df086fb...
commit | commitdiff | tree
2012-06-07 jprocterjavatidy
 commit | commitdiff | tree
2012-06-07 jprocterJAL-967, JAL-1114, JAL-1115 - modified render and calculatio...
commit | commitdiff | tree
2012-06-07 jprocterJAL-976 ensure job id gets written out if there's an...
commit | commitdiff | tree
2012-06-04 jprocterjavatidy
 commit | commitdiff | tree
2012-05-31 jprocterjavatidy
 commit | commitdiff | tree
2012-05-31 jprocterformatting
 commit | commitdiff | tree
2012-05-30 jprocterJAL-969 - refactor colourscheme machinery from GUI...
commit | commitdiff | tree
2012-05-30 jprocterJAL-1109 JAL-1065 resolve t-coffee score scheme by...
commit | commitdiff | tree
2012-05-30 jprocterupdated schema to store and recover belowAlignment...
commit | commitdiff | tree
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashtables...
commit | commitdiff | tree
2012-05-30 jprocterformatting
 commit | commitdiff | tree
next