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jalview.git
2017-05-02
Jim Procter
Merge branch 'bug/JAL-2424getVisibleContigs' into develop
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2017-05-02
gmungoc
JAL-2499 inlined two 1-line methods
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2017-05-02
gmungoc
JAL-2499 JAL-2403 push 'configure for view' inside...
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2017-05-02
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
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2017-05-02
kiramt
JAL-2491 first addition of new event
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2017-05-01
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2017-05-01
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2017-05-01
tcofoegbu
JAL-2482 bug fix
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2017-05-01
tcofoegbu
JAL-2482 unit test for bug fix
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2017-05-01
gmungoc
JAL-2489 JAL-2371 reinstate calls to
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2017-05-01
tcofoegbu
JAL-2465 missed commit for refactore renaming of getPdb...
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2017-05-01
tcofoegbu
JAL-2465 bugfix and rerefactor renamed getPdbFile(...
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2017-05-01
tcofoegbu
JAL-2465 unit test for bugfix
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2017-05-01
gmungoc
Merge remote-tracking branch
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2017-05-01
tcofoegbu
JAL-2376 copied out patch from Phyre branch
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2017-04-28
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
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2017-04-27
Jim Procter
Merge branch 'features/JAL-1933_occupancy' into develop
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2017-04-27
Jim Procter
JAL-1933 patch jalview/io/testProps.jvprops to show...
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2017-04-27
Jim Procter
JAL-1933 patch jalview/io/testProps.jvprops to show...
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2017-04-27
Jim Procter
Merge branch 'features/JAL-1933_occupancy' into develop
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2017-04-27
Jim Procter
JAL-1933 don't show occupancy row when testing conserva...
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2017-04-27
Jim Procter
Merge branch 'features/JAL-1933_occupancy' into develop
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2017-04-27
Jim Procter
JAL-1933 applet doc for showOccupancy parameter
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2017-04-27
Jim Procter
JAL-1933 desktop documentation for show occupancy prefe...
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2017-04-27
Jim Procter
JAL-1933 use constant for preference token
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2017-04-27
Jim Procter
Merge branch 'features/JAL-1933_occupancy' into develop
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2017-04-27
Jim Procter
JAL-1933 consensus calculation doesn’t depend on occupa...
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2017-04-27
Jim Procter
JAL-1933 desktop preferences for occupancy
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2017-04-27
Jim Procter
JAL-1933 action and label for occupancy
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2017-04-27
Jim Procter
JAL-1933 test for SHOW_OCCUPANCY .jalview_properties...
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2017-04-27
Jim Procter
JAL-1933 showOccupancy applet parameter and SHOW_OCCUPA...
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2017-04-27
Jim Procter
JAL-1933 only create and add occupancy row to alignment...
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2017-04-27
Jim Procter
JAL-2494 fix: updated behaviour for SequenceGroup.findA...
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2017-04-27
Jim Procter
JAL-2494 fixed behaviour for null parameters in line...
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2017-04-27
Jim Procter
JAL-2494 javadoc for AnnotatedCollectionI.findAnnotations
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2017-04-27
Jim Procter
JAL-2494 test to cover AnnotatedCollectionI.findAnnotat...
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2017-04-27
Jim Procter
Merge branch 'features/JAL-1933_occupancy' into develop
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2017-04-27
Jim Procter
JAL-2432 desktop: filter/select columns by threshold...
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2017-04-27
Jim Procter
JAL-1933 JAL-2432 code tidy
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2017-04-27
Jim Procter
JAL-2432 left justify value shown after adjusting thres...
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2017-04-27
Jim Procter
JAL-1933 JAL-2432 percentile filter for select/hide...
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2017-04-27
Jim Procter
JAL-1933 shade occupancy from light grey to black for...
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2017-04-27
Jim Procter
JAL-1933 don’t show symbol counts under histogram ...
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2017-04-27
Jim Procter
JAL-1933 occupancy row has a space below it for counts
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2017-04-27
Jim Procter
Merge branch 'develop' into features/JAL-1933_occupancy
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2017-04-26
kiramt
Merge remote-tracking branch 'origin/features/JAL-2388h...
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2017-04-26
kiramt
JAL-2388 Update to hidden columns/column selection...
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2017-04-26
kiramt
Merge remote-tracking branch 'origin/develop' into...
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2017-04-26
kiramt
Merge remote-tracking branch 'origin/develop' into...
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2017-04-26
kiramt
Merge remote-tracking branch 'origin/features/JAL-2388h...
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2017-04-26
kiramt
JAL-2388 last separation of hidden columns/col selection
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2017-04-26
kiramt
JAL-2388 Tidies and unit tests
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2017-04-25
tcofoegbu
JAL-2489 edited unit test code comment
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2017-04-25
tcofoegbu
JAL-2489 Unit test for bug
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2017-04-25
kiramt
JAL-2388 Missed file from previous commit
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2017-04-25
kiramt
JAL-2388 Reverted and re-did applet changes
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2017-04-25
kiramt
JAL-2388 Tidies and other corrections so applet compiles
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2017-04-25
kiramt
JAL-2388 And corrected OverviewCanvas for applet
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2017-04-25
kiramt
JAL-2388 Updated applet to show/hide hidden regions...
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2017-04-25
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2017-04-25
tcofoegbu
JAL-2489 bug fix
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2017-04-25
kiramt
JAL-2388 Working hidden regions hide/show in desktop
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2017-04-25
tcofoegbu
JAL-1648 enabled caching for Select / Hide columns...
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2017-04-24
tcofoegbu
JAL-1648 House keeping
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2017-04-24
gmungoc
JAL-2487 remove redundant refreshGUI to minimise thread...
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2017-04-24
kiramt
Merge remote-tracking branch
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2017-04-24
kiramt
Merge remote-tracking branch 'origin/develop' into...
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2017-04-24
kiramt
Merge remote-tracking branch 'origin/develop' into...
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2017-04-24
kiramt
JAL-2388 Finished split of hidden columns and selected...
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2017-04-24
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
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2017-04-24
gmungoc
JAL-2424 final contig now an inclusive range
bug/JAL-2424getVisibleContigs
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2017-04-24
tcofoegbu
JAL-1648 added unit test for AppCache
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2017-04-24
kiramt
JAL-2439 Fixed opposite out-by-one problem in wrapped...
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2017-04-24
kiramt
Merge branch 'develop' of https://source.jalview.org...
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2017-04-24
kiramt
JAL-2439 Fix to hidden column marker being one row...
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2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
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2017-04-21
gmungoc
JAL-2295 Spanish translations for superposition / errors
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2017-04-21
gmungoc
JAL-2295 Spanish translations added
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2017-04-21
gmungoc
JAL-2361 Spanish text added
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2017-04-21
gmungoc
JAL-2423 tweak tree panel title, add Spanish text
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2017-04-21
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
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2017-04-21
tcofoegbu
JAL-2485 Bug fix to filter out uniprot response header...
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2017-04-21
kiramt
JAL-2388 Tidies
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2017-04-21
kiramt
JAL-2388 Make sure resizing still works
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2017-04-21
kiramt
JAL-2388 Alignment col and row collections with iterators
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2017-04-20
tcofoegbu
JAL-1648 house-keeping
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2017-04-20
tcofoegbu
JAL-1648 house-keeping
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2017-04-20
tcofoegbu
JAL-2484 minor house-keeping
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2017-04-20
tcofoegbu
JAL-2484 minor house-keeping and code docs
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2017-04-20
tcofoegbu
JAL-2484 added improvement to enable clearing cache...
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2017-04-20
tcofoegbu
JAL-1648 refactored and improved caching architecture...
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2017-04-19
gmungoc
JAL-2435 mirror font changes with middle mouse drag
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2017-04-19
gmungoc
Merge branch 'develop' into features/JAL-2435splitScree...
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2017-04-19
tcofoegbu
JAL-2482 added null check
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2017-04-19
kiramt
Merge remote-tracking branch 'origin/develop' into
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2017-04-18
tcofoegbu
JAL-2482 Bugfix
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2017-04-17
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
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2017-04-12
gmungoc
JAL-2361 tweak layout of warning message
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2017-04-12
gmungoc
JAL-1632 removed check for aligned sequences for Tree...
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2017-04-12
gmungoc
JAL-1632 remove unused check for sequences aligned
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