jalview.git
2005-05-05 amwaterhousesend rotCanvas sequence and viewport
2005-05-05 amwaterhousepdbfile details not essential to sequence
2005-05-05 amwaterhouseaddelement replaces add
2005-05-04 amwaterhouseadded remark about right mouse in awt
2005-05-04 amwaterhousevalidate and repaint after changing panels
2005-05-04 amwaterhousemouse listeners added
2005-05-04 amwaterhouserenderer removed
2005-05-04 amwaterhouseno need to send pid, seqnum
2005-05-04 amwaterhouseSequenceRenderer changes
2005-05-04 amwaterhouseno need to send vector pid or seqnum
2005-05-04 amwaterhouseNo need for this interface
2005-05-04 amwaterhouseApplet files
2005-05-03 jprocterBetter treatment of error states and cancellability...
2005-05-03 amwaterhouseformatAdapter.formatSequences and maintain annotation...
2005-05-03 amwaterhouseformatAdapter.formats
2005-05-03 amwaterhouseformatAdapter.readFile
2005-05-03 amwaterhousechange Container to Component
2005-05-03 amwaterhouseformatAdapter.formats, remove redundant code
2005-05-03 amwaterhouse1.1 compatible, formatting changes
2005-05-03 amwaterhouseFormatAdapter readFile
2005-05-03 amwaterhouse1.1 compatible
2005-05-03 amwaterhousefindKmers and fetchSequenceFeatures removed
2005-05-03 amwaterhouseRemoved as obfuscation of classes wiill change class...
2005-04-29 amwaterhouseselects default colour
2005-04-29 amwaterhousejust tidying up unused imports
2005-04-29 jprocterstopped duplicate jars appearing in jalview.jar
2005-04-29 amwaterhouseREad in defaultColour
2005-04-29 amwaterhousepreferences held statically
2005-04-29 amwaterhousepreferences moved to desktop
2005-04-29 amwaterhouseread in preferences at start up
2005-04-28 jprocterAdded MuscleWS back in
2005-04-28 jprocterFirst try with MuscleWS and vamsas.simple.objects
2005-04-28 jprocterFirst try with MuscleWS
2005-04-28 amwaterhouseno longer used
2005-04-28 amwaterhouseLabel changes as AF recommended
2005-04-28 amwaterhousemust set consensus in child colourscheme
2005-04-28 amwaterhouseUpdated for use by preferences panel
2005-04-28 amwaterhouseGUI changes
2005-04-28 amwaterhousePreferences panel added
2005-04-28 amwaterhouseViewport now looks at preferences when loading up
2005-04-28 amwaterhouseSet fullscreen if in preferences
2005-04-28 amwaterhousecan search ids
2005-04-28 amwaterhouseset as default added
2005-04-28 amwaterhousesearch ids added
2005-04-28 amwaterhouseMenu names changed
2005-04-28 amwaterhouseJInternalFrame is within class. Method to load default...
2005-04-28 amwaterhousePreferences panel added
2005-04-28 amwaterhouseset gap char modified
2005-04-28 jprocteradded MuscleWS and did a bit more standardisation of...
2005-04-25 amwaterhouseif applet, load properties in void init
2005-04-25 amwaterhouse+1 in fastpaint sends coloured text outofbounds
2005-04-25 amwaterhousedont update overview every repaint
2005-04-25 amwaterhouseLoading alignment threaded
2005-04-25 amwaterhouseSyncronize drawPanel, as overviewpanel is threaded
2005-04-25 amwaterhouseOverviewpanel allows for large alignments
2005-04-21 amwaterhouseadd consslider to palette layer
2005-04-21 amwaterhouseAllow for clipped region when printing
2005-04-21 amwaterhouseTick 5 and 10 marks
2005-04-21 amwaterhousePrinting changes
2005-04-21 amwaterhouseupdate conSlider when colour changes
2005-04-21 amwaterhouseAllow for -open arg
2005-04-19 amwaterhouseno need to keep setting selected, its on the palette...
2005-04-19 amwaterhouseadd splash to palette layer
2005-04-19 amwaterhousePrinting of trees corrected. Antialiasing on
2005-04-18 amwaterhousepainting syncronized, spin increments in units, not...
2005-04-18 amwaterhousewrap alignment box paints correctly
2005-04-18 amwaterhouseblosum62 must have its on consensus
2005-04-18 amwaterhousesetendres -1
2005-04-18 amwaterhouseposition of bioinformatics
2005-04-18 amwaterhouseset PNG antialiasing on
2005-04-18 amwaterhouseshow sliders when first selecting conservation,PID
2005-04-18 amwaterhousedont drag beyond end of alignment
2005-04-18 amwaterhouseselected group draws last residue
2005-04-18 amwaterhouserepaint removed
2005-04-18 amwaterhousefastPaint modified incase scroll is more than page...
2005-04-18 amwaterhousecalls fontChanged
2005-04-18 amwaterhousefontChanged method added, componentListener removed
2005-04-16 amwaterhousemake sure we draw last line of wrapped alignment
2005-04-16 amwaterhouseallow for final line of alignment
2005-04-16 amwaterhousefix wrap alignment vscroll visible amount
2005-04-16 amwaterhousecheck if colourscheme is null
2005-04-16 amwaterhouseAlignPanel RefreshPanels put into paintComponent
2005-04-15 amwaterhouseclustalx exception in colourchange
2005-04-15 amwaterhouseno longer used
2005-04-15 amwaterhouseconsensus held in residueColour
2005-04-15 amwaterhouseno need to send consensus
2005-04-15 amwaterhousetakes on methods previously in desktop
2005-04-15 amwaterhouseno need to send consensus everytime
2005-04-15 amwaterhousepid and conservation changes
2005-04-15 amwaterhouseadjust annotation panel height when font changed
2005-04-15 amwaterhousepid and conservation slider moved to sliderPanel
2005-04-15 amwaterhousefontmetrics must be obtained after font change
2005-04-15 amwaterhousedraw graph label lower down
2005-04-15 amwaterhousepublic vconsensus available for PID and Blosum
2005-04-15 amwaterhousePID and conservation colouring changes
2005-04-15 amwaterhouseconservation & consensus recalc if group changed
2005-04-14 amwaterhousecomment out jnetpropb, h and c
2005-04-14 amwaterhousenot added to the palette layer
2005-04-14 amwaterhouseuse 3 as the threshold
2005-04-14 amwaterhouseif image is null, repaint
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