jalview.git
2006-03-27 jprocterpart finished (still finishing the updateJalview method...
2006-03-27 jprocterpreliminary notes on javliew sync with vamsas document
2006-03-26 jproctermodified constructor for jalview.gui.VamsasClient
2006-03-26 jprocterrefactored VamsasClient to jalview.gui, and created...
2006-03-25 jprocterbasic VamsasSession gui bits.
2006-03-24 amwaterhouseFeature settings Root_VamJalview_2_07b+
2006-03-24 amwaterhouseHas its own featureRenderer
2006-03-24 amwaterhouseGroup colours not used
2006-03-24 amwaterhouseAssociated Data menu item
2006-03-24 amwaterhouseCursor added
2006-03-24 amwaterhouseTypo
2006-03-24 amwaterhousefr.transferSettings
2006-03-24 amwaterhouseFeatureSettings bug fixed
2006-03-24 amwaterhouseFeature added to group search results
2006-03-24 amwaterhouseGroups compatibility
2006-03-24 amwaterhouseNo need to hava SSX as array
2006-03-24 amwaterhouseCursoMode added
2006-03-24 amwaterhouseLoad data file added
2006-03-24 amwaterhouseTrim line
2006-03-24 amwaterhouseFeatures added to group Uniprot
2006-03-24 amwaterhouseAdd check if sequence already exists
2006-03-24 amwaterhouseFeaturesGroup added to constructor
2006-03-24 amwaterhouse1 too many
2006-03-24 amwaterhouseFeatures added to group search results
2006-03-24 amwaterhouse-1 +1 check removed
2006-03-24 amwaterhouse1 too many in drawgraph
2006-03-24 amwaterhouseAnnotation colour scheme added
2006-03-24 amwaterhouseCalled from AnnotationColourChooser and Feature Settings
2006-03-24 amwaterhouseAnnotation colours added to applet
2006-03-24 amwaterhouseZSort no longer static
2006-03-24 amwaterhouseHas own featurerenderer
2006-03-20 amwaterhouseRearranged text
2006-03-20 amwaterhouseCorrect reference
2006-03-20 amwaterhousetypo
2006-03-20 amwaterhouseReference added
2006-03-20 jprocteradded example jnlp to memory settings help
2006-03-20 jprocteradded link to example jnlp file
2006-03-20 jprocterexample jnlp file for users to edit and save locally
2006-03-17 jprocterjnet method description correction.
2006-03-16 amwaterhouseFix for Finn Drablos bug. Must use equals for comparing...
2006-03-16 amwaterhousehistoryItem.restore
2006-03-16 amwaterhouseHideSequences
2006-03-16 amwaterhousegetWidth and getHeight just once
2006-03-16 amwaterhouse-1 to drawGraphs
2006-03-16 amwaterhouseisVisible and hiddenboundary added
2006-03-16 amwaterhouseUserColors not used here
2006-03-16 amwaterhouseHidden Rows
2006-03-16 amwaterhouseReveal
2006-03-16 amwaterhouseFaster
2006-03-16 amwaterhouseHide Sequences
2006-03-16 amwaterhouseTooltip for hidden columns
2006-03-16 amwaterhouseHidden column adjustments
2006-03-16 amwaterhouseScrolls when editing
2006-03-16 amwaterhouseGethidden sequences
2006-03-16 amwaterhouseHiddenSequence methods
2006-03-16 amwaterhousegetHiddenSequences
2006-03-16 amwaterhouseKeeps a record of hidden sequences
2006-03-16 amwaterhouseAllow loading from Zip files
2006-03-16 amwaterhouseLoad tree
2006-03-16 amwaterhouseCandP takes AlignFrame, not applet
2006-03-16 amwaterhouseFastpaint updates
2006-03-16 amwaterhouseCheck endres when drawing graphs
2006-03-16 amwaterhouseCut and paste may be inserted into Dialog frame
2006-03-16 amwaterhouseFastest implementation so far
2006-03-16 amwaterhouseExtra argument false
2006-03-16 amwaterhouseScroll implemented for applet editing
2006-03-16 amwaterhouseSelection Group rendering updated
2006-03-16 amwaterhouseReduced arguments for speed
2006-03-16 amwaterhouseCan be used for user features
2006-03-16 amwaterhouseAdd new feature from seqrch results
2006-03-16 amwaterhouseFeature rendering in groups
2006-03-16 amwaterhouseOut of bounds check
2006-03-16 jprocteradded description of alignment quality scores and separated
2006-03-14 jproctermethods for searching DBRef lists
2006-03-13 jprocterfixes bug 0013013 but reveals lack of a 'features retri...
2006-03-13 jprocterbug fix for 0013013
2006-03-08 amwaterhouseSequences can have a description
2006-03-08 amwaterhouseFeatures may belong to a feature group
2006-03-08 amwaterhouseIdentifyFile should not be static
2006-03-08 amwaterhouseCan read from zip file
2006-03-08 amwaterhouseBlank space is white
2006-03-08 amwaterhouseReveal All added
2006-03-08 amwaterhouse<= fastPaints hidden columns
2006-03-08 amwaterhouseCheck for visibleGroup==null
2006-03-08 amwaterhouseIdentfyFile should not be static
2006-03-08 amwaterhouseRevealAllHiddenColumns
2006-03-08 amwaterhouseAllow for hidden columns
2006-03-08 amwaterhouseAble to read resources from Zip file
2006-03-08 amwaterhouseBlank space is white
2006-03-08 amwaterhousePASTE is constant in AppletFormatAdapter
2006-03-08 amwaterhousePack resources in Zip file
2006-03-01 jprocterfixed after refactoring of SequenceFeature[] seq.getSeq...
2006-03-01 jprocterpropagate SearchResult object use to MCView's highlight...
2006-02-24 amwaterhouseP1 changed to N1
2006-02-24 amwaterhouseAdd Annotation to specific sequence
2006-02-24 amwaterhouseCannot delete residues
2006-02-24 amwaterhouseFeatures now array
2006-02-24 amwaterhouseKeeps original threshold value
2006-02-24 amwaterhousesetShowSequenceFeatures
2006-02-24 amwaterhouseFirst attempt at hidden regions
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