jalview.git
2006-08-18 amwaterhouseremove all representative seqs on delete groups
2006-08-18 amwaterhousetreeFile = treeFile
2006-08-18 amwaterhouseOnly discover DAS sources if panel shown
2006-08-18 amwaterhouseonly set new layout if 2 buttons visible
2006-08-18 amwaterhouseJalview features format adds links as hrefs
2006-08-17 amwaterhouseH key updates
2006-08-17 amwaterhouseOptionPane invokeLater
2006-08-17 amwaterhouseIf no annotation exists
2006-08-17 amwaterhouseSet bg white
2006-08-17 amwaterhouseHold onto selected region when hiding all columns only
2006-08-17 jproctermoved visible sub-alignment extraction and update from...
2006-08-17 jprocterjavadoc
2006-08-17 amwaterhouseMonospace check
2006-08-17 amwaterhouse1 more pixel allowed between chars and graph
2006-08-17 amwaterhouseKeys update
2006-08-17 amwaterhousecontrol and shift
2006-08-17 amwaterhouseDont set group null hideCOls
2006-08-17 amwaterhouseOptionPanes invokeLater
2006-08-17 amwaterhouseControl and alt for toggle hide
2006-08-16 amwaterhouseFire alignment changed if seqs hidden / revealed
2006-08-15 amwaterhouseCorrect title for sequence parameter applets
2006-08-15 amwaterhouseSequences can be added as parameter
2006-08-15 amwaterhouseH key added
2006-08-15 jproctermake annotation label font size follow alignment font...
2006-08-15 jprocterfirst stage of adapting JNet client to hidden regions...
2006-08-15 jprocterfixed alignment ordering name.
2006-08-15 jprocterensure that close widget is available for jobs that...
2006-08-15 amwaterhouseAcknowledgement
2006-08-15 amwaterhouseSetselectiongroup null on hide
2006-08-15 amwaterhouseH key to hide / reveal
2006-08-15 amwaterhouseAdd key listener to scalePanel and annotationPanel
2006-08-15 amwaterhouseSelect revealed seqs
2006-08-15 amwaterhouseWRITEABLE_FORMATS and READABLE_FORMATS string []
2006-08-15 amwaterhouseMove features to dataset
2006-08-14 amwaterhouseStockholm parser added
2006-08-14 amwaterhouseStockholm parser
2006-08-14 jprocterrefactored to create generic polling thread and subjobs
2006-08-14 amwaterhouse2.1 updates
2006-08-14 jprocterfunction to indicate job has finished but no results...
2006-08-14 amwaterhouseNew file
2006-08-14 amwaterhousenew feature added
2006-08-14 amwaterhouseStop loading must be before JOptionPane, 1.5 bug
2006-08-14 amwaterhouseNo need to check selection group size
2006-08-14 amwaterhousefindSequenceMatch returns multiple sequences
2006-08-14 amwaterhouseDo a loop for multiple seq matches
2006-08-14 amwaterhouseCorrect test string
2006-08-14 jproctermultiple subjobs can be cancelled and gui only allows...
2006-08-14 jprocterfixed off by one bug in end sequence from getSubSequenc...
2006-08-14 amwaterhousefindingFeatures flag set
2006-08-14 amwaterhouse2.1 updates
2006-08-14 amwaterhouse2.1 updates
2006-08-14 amwaterhouse2.1 new files
2006-08-14 amwaterhouseReplaced image
2006-08-14 amwaterhouseMerged with edit
2006-08-14 jprocterend<start for empty sequences in Sequence[] from SeqCigar[]
2006-08-14 amwaterhouseelementAt instead of get for 1.1 compatibility
2006-08-14 jprocterfixing residue clip bug in MsaWSThread and adding minim...
2006-08-13 jprocterfixed end-residue bug and subjob panel names bug
2006-08-11 jproctermultiple web service jobs from visible blocks of an...
2006-08-11 amwaterhouseUpdate overview on conservation/pid slider mouseRelease
2006-08-11 amwaterhousealignpanel.repaint
2006-08-11 amwaterhouseAdd links menu if no sequence is selected
2006-08-11 amwaterhousepopup must be added to panel before showing
2006-08-11 amwaterhouseparam tree replaces treeFile
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhouse2.1 updates
2006-08-11 amwaterhousenew files
2006-08-11 amwaterhousedud file
2006-08-11 amwaterhouseDesktop is null if -noDisplay is set
2006-08-11 amwaterhouseMake a new FeatureRenderer
2006-08-11 amwaterhouseAlignPanel.repaint
2006-08-11 amwaterhousePrintstacktrace
2006-08-11 amwaterhouseinFile might be null if PDB was pasted
2006-08-10 amwaterhouseSmoother drawing
2006-08-10 amwaterhouseCheck selection size before making tree
2006-08-10 amwaterhousegroup.getSize should be ab.alignment.getGroups
2006-08-10 amwaterhouseCheck alAndColSel are not null
2006-08-10 amwaterhouseControl and shift for col selection
2006-08-10 amwaterhouseReset button added
2006-08-10 amwaterhouseRight mouse works with cursor mode
2006-08-10 amwaterhouseOnly add 1 feature settings table
2006-08-10 amwaterhouseComment out start and end refs
2006-08-10 amwaterhouse1.1 compatible
2006-08-10 amwaterhousefile: is a URL
2006-08-10 amwaterhouseInvert column selection
2006-08-09 jprocternew SequenceI method for making a sub sequence from...
2006-08-09 jprocteralignment from seqCigars will correctly mark deleted...
2006-08-09 jprocterrefactored hidden regions methods and made an Alignment...
2006-08-09 jprocterfixed multiple shifts bug.
2006-08-09 amwaterhouseMust save all the feature settings
2006-08-09 amwaterhouseCheck if groups have already been added or not
2006-08-09 amwaterhouseFix for local sources with no capabilities
2006-08-09 amwaterhouseIcon drawing updated
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