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jalview.git
2018-06-04
gmungoc
JAL-3010 pop-up sort including sub-types when in Summar...
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2018-06-04
gmungoc
JAL-3010 action handler for toggle of 'Apply to sub...
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2018-06-04
gmungoc
JAL-3010 tidy placement of 'Apply to sub-types' checkbox
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2018-06-04
gmungoc
JAL-3010 select/hide columns includes subtypes in Summa...
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2018-06-03
gmungoc
JAL-3010 double-click selects columns for term and...
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2018-06-03
gmungoc
JAL-3010 option to apply colour to all ontology sub...
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2018-06-03
gmungoc
JAL-3010 method extracted for setSubtypesVisibility
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2018-06-03
gmungoc
JAL-3010 apply Visibility to sub-types if set in Summar...
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2018-06-01
gmungoc
JAL-3010 allow list of subtypes to be sortable
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2018-06-01
gmungoc
JAL-3010 options to hide / apply changes to ontology...
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2018-06-01
gmungoc
JAL-3010 refactoring to support feature type grouping...
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2018-06-01
gmungoc
JAL-3010 JAL-1191 default is full Sequence Ontology...
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2018-05-31
gmungoc
JAL-2808 don't capture or report min-max for mixed...
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2018-05-31
gmungoc
JAL-2808 pre-fill numeric inequality filter with min...
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2018-05-28
gmungoc
Merge branch 'bug/JAL-797' into develop
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2018-05-28
gmungoc
Merge remote-tracking branch 'origin/releases/Release_2...
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2018-05-26
Jim Procter
JAL-2999 release date for 2.10.4b1 set for 27th May...
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2018-05-25
Jim Procter
Merge branch 'documentation/JAL-2999_r2104b1' into...
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2018-05-25
Jim Procter
Merge branch 'bug/JAL-2992panelHeight' into releases...
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2018-05-25
Jim Procter
Merge branch 'bug/JAL-1460_dragndropWindows' into relea...
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2018-05-25
gmungoc
JAL-2992 simpler heuristic for available height
bug/JAL-2992panelHeight
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2018-05-25
Jim Procter
Merge branch 'bug/JAL-2991_exporttosvgwrapview' into...
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2018-05-25
Jim Procter
Merge branch 'feature/JAL-2994chimeraPath' into release...
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2018-05-25
Jim Procter
JAL-1460 clarify release notes - and mention that short...
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2018-05-25
Jim Procter
JAL-2994 add a few future release points for good measu...
feature/JAL-2994chimeraPath
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2018-05-25
Jim Procter
JAL-1460 temp variable for clearer conditional and...
bug/JAL-1460_dragndropWindows
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2018-05-25
Jim Procter
JAL-1460 javadoc
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2018-05-25
gmungoc
JAL-2995 tooltip on fields with double-click to browse...
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2018-05-25
gmungoc
JAL-2994 temporary patch with paths to Chimera for...
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2018-05-24
Jim Procter
JAL-2999 issues resolved (or nearly so) for 2.10.4b1
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2018-05-24
gmungoc
JAL-2997 additional tests
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2018-05-24
Jim Procter
JAL-1460 tidied up the use of windows link file parser
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2018-05-24
Jim Procter
JAL-1460 more complete drag'n'drop debugging info and...
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2018-05-24
Jim Procter
JAL-1460 process .lnk files dragged to Jalview when...
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2018-05-24
Jim Procter
JAL-1460 new data flavor for URLs added belt-and-braces...
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2018-05-23
gmungoc
JAL-2993 AlignFrame listen for keystrokes in OverviewPanel
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2018-05-23
gmungoc
JAL-2997 unit test
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2018-05-23
Jim Procter
fix for JAL-2991 - we could do better :/
bug/JAL-2991_exporttosvgwrapview
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2018-05-23
gmungoc
JAL-2997 handle tab-delimited trailing column number...
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2018-05-23
Jim Procter
JAL-2999 release notes and version bump for jalview...
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2018-05-23
Jim Procter
JAL-2895 replace $$Jalview-Version$$ in help.jhm with...
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2018-05-21
gmungoc
JAL-797 Cmd-W act WHEN_IN_FOCUSED_WINDOW
bug/JAL-797
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2018-05-11
gmungoc
JAL-2986 corrected findIndex for out of range residue...
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2018-05-11
gmungoc
JAL-2986 additional asserts for SequenceCursor updates
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2018-05-11
gmungoc
JAL-2986 failing test added
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2018-05-10
Jim Procter
JAL-2920 release notes
Release_2_10_4
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2018-05-10
Jim Procter
Merge branch 'bug/JAL-2920_uniprotvariantfeature' into...
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2018-05-10
Jim Procter
JAL-2920 basic test for Description from features with...
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2018-05-10
Jim Procter
JAL-2920 simplified logic and added corner cases for...
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2018-05-09
Jim Procter
JAL-2906 update release date and release notes
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2018-05-09
Jim Procter
JAL-2931 patch IA paths for new build box
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2018-05-09
gmungoc
JAL-2984 add pdb as sequence(s) if associate structure...
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2018-05-09
Jim Procter
Merge branch 'patch/JAL-2976_vaqua4_fallback' into...
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2018-05-09
Jim Procter
JAL-2976 fixed bad equivalence check and implemented...
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2018-05-08
Jim Procter
JAL-2321 release notes
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2018-05-08
Jim Procter
Merge branch 'patch/JAL-2321_addsecstrForDroppedPDBFile...
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2018-05-07
Jim Procter
JAL-2321 patch test to ensure structures are actually...
patch/JAL-2321_addsecstrForDroppedPDBFile
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2018-05-07
Jim Procter
JAL-2321 ensure default is ‘parseImmediately=true’
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2018-05-07
Jim Procter
JAL-2321 use configured values for structure derived...
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2018-05-07
Jim Procter
JAL-2321 add secondary structure & temp factor if not...
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2018-05-07
Jim Procter
JAL-2321 use StructureImportSettings singleton settings...
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2018-05-07
Jim Procter
JAL-2321 isParseImmediately() allows the parse() method...
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2018-05-07
Jim Procter
JAL-2321 allow JmolParser to be configured before parsi...
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2018-05-07
gmungoc
JAL-2808 ensure test setUp/tearDown alwaysRun
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2018-05-07
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
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2018-05-07
Jim Procter
JAL-2906 apply GPLv3 license source
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2018-05-07
Jim Procter
JAL-2960 don’t override a swing method and create infin...
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2018-05-07
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' of source...
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2018-05-04
gmungoc
JAL-2906 small tweaks to release notes
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2018-05-04
Jim Procter
JAL-2906 2.10.4 release for 8th May 2018
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2018-05-04
Jim Procter
Merge branch 'bug/JAL-2899' into releases/Release_2_10_...
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2018-05-04
Jim Procter
JAL-2906 removed mention of experimental features,...
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2018-05-04
Jim Procter
JAL-2976 patch NPE when trying to open Uniprot FTS
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2018-05-04
Jim Procter
JAL-2929 JAL-2922 release notes
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2018-05-04
Jim Procter
JAL-2976 typo in installAnywhere build for VAqua dependency
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2018-05-04
Jim Procter
JAL-2960 release notes
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2018-05-04
Jim Procter
JAL-2948 transfer features/annotation is now available...
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2018-05-04
Jim Procter
JAL-2960 raise the structure view after adding structur...
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2018-05-04
Jim Procter
JAL-2976 Vaqua fallback release notes JAL-2906
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2018-05-04
Jim Procter
Merge branch 'patch/JAL-2976_vaqua4_fallback' into...
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2018-05-02
Jim Procter
JAL-2976 fallback to Vaqua for Macs that don’t work...
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2018-05-02
Jim Procter
JAL-2976 Vaqua(4) as a dependency
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2018-05-01
Jim Procter
JAL-2899 release notes
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2018-05-01
Jim Procter
JAL-2973 JAL-2974 known defects for 2.10.4 (JAL-2906)
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2018-05-01
Jim Procter
JAL-2925 release notes
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2018-05-01
Jim Procter
JAL-2593 JAL-2945 JAL-2952 JAL-2954 release notes for...
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2018-05-01
Jim Procter
JAL-2223 JAL-2781 JAL-2780 JAL-2946 JAL-2906 release...
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2018-05-01
Jim Procter
JAL-2906 reformat release notes
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2018-05-01
Jim Procter
JAL-2906 typo
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2018-05-01
Jim Procter
JAL-2944 revised docs and structure chooser screen...
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2018-05-01
Jim Procter
JAL-2899 colouring moved from SwingWorker to a backgrou...
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2018-04-30
Jim Procter
Merge branch 'bug/JAL-2899' into releases/Release_2_10_...
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2018-04-30
Jim Procter
JAL-2906 release 2.10.4 on 1st May 2018
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2018-04-25
Jim Procter
Merge branch 'features/JAL-2944_openStructuresInSelecte...
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2018-04-24
gmungoc
JAL-2959 no Print dialog shown if Page Format is Cancelled
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2018-04-23
gmungoc
JAL-2954 more efficient SearchResults.markColumns
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2018-04-23
gmungoc
JAL-2952 set negative TempFactor values as AlignmentAnn...
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2018-04-18
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
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2018-04-18
gmungoc
JAL-2593 render 'duplicate' features if transparency...
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2018-04-13
gmungoc
Merge branch 'features/JAL-2944_openStructuresInSelecte...
features/JAL-2944_openStructuresInSelectedView
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