jalview.git
2024-01-11 James ProcterJAL-4366 remove some tortuous repetition in computeMapp...
2024-01-11 James ProcterJAL-4366 incomplete test verifying a 3di alignment...
2024-01-11 James ProcterJAL-4366 new mapping type for 3di/protein sequence...
2024-01-11 James ProcterJAL-4366 allow a 3di alignment to be loaded and shown...
2023-12-17 James ProcterJAL-4366 account for 3dmat matrix in tests
2023-12-16 James ProcterJAL-4366 1:1 mapping requires exact sequence length...
2023-12-16 James ProcterJAL-789 pairwise alignment via calculations dialog...
2023-12-16 James ProcterJAL-4366 mat3di score model
2023-12-15 James ProcterJAL-4366 hacked in a 1:1 mapping
2023-12-15 James ProcterJAL-1551 formatting
2023-12-15 James ProcterJAL-4366 build a mapping to a PDBChain with an arbitrar...
2023-12-15 James ProcterJAL-4366 compute coverage on each side of the pairwise...
2023-12-14 James ProcterJAL-4356 update release notes
2023-12-14 James ProcterMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe...
2023-12-14 James ProcterMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe...
2023-12-14 James ProcterJAL-4353 wait for files to be written fully before...
2023-12-14 James ProcterJAL-4217 singleThread all tests
2023-12-14 James ProcterMerge branch 'bug/JAL-2934proportionalScrolling' into...
2023-12-14 James ProcterMerge branch 'develop' into bug/JAL-2934proportionalScr... bug/JAL-2934proportionalScrolling
2023-12-12 Ben SoaresJAL-4353 bigger tighter test
2023-12-12 James ProcterJAL-4217 don’t try and export an image when Jmol is...
2023-12-12 Ben SoaresMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe...
2023-12-12 James ProcterMerge branch 'develop' into bug/JAL-4353_cannot_output_...
2023-12-12 James ProcterJAL-4217 close internal frame on the swing thread to...
2023-12-12 Ben SoaresJAL-4353 helper method and test for primary/secondary...
2023-12-12 James ProcterMerge branch 'bug/JAL-4353_cannot_output_multiple_diffe...
2023-12-12 James ProcterJAL-4353 failing test
2023-12-12 James ProcterJAL-4353 fix assert that successive test output files...
2023-12-11 James ProcterJAL-4192 more specific info about versions needed
2023-12-06 Ben SoaresJAL-4353 re-used random color code
2023-12-06 Ben SoaresJAL-4353 Preserve the user given 'linkedId' with ArgVal...
2023-12-06 James ProcterJAL-4356 bump RELEASE
2023-12-06 James ProcterJAL-4356 new release notes and whats new for 2.11.3...
2023-12-06 James ProcterMerge branch 'patch/JAL-840_clustalx_docs_fix' into...
2023-12-06 James ProcterMerge branch 'bug/JAL-2934proportionalScrolling' into...
2023-12-06 Ben SoaresJAL-4353 Add a 'random' colour to produce a random...
2023-12-05 Ben SoaresJAL-4353 Add secondary Types for Args, for STRUCTUREIMA...
2023-12-01 Ben SoaresJAL-4243 Updated bio.tools record and JSON (version...
2023-11-30 James ProcterJAL-4351 update release notes for JAL-4342
2023-11-30 James ProcterMerge branch 'patch/JAL-4342_emptyannotationsexport...
2023-11-30 James ProcterJAL-4342 test and patch checking annotation csv export... patch/JAL-4342_emptyannotationsexport
2023-11-30 James ProcterPatch fixes JAL-4165 - added to release notes JAL-4351
2023-11-30 James ProcterJAL-4351 2.11.3.2 scheduled for 1st December release
2023-11-30 James ProcterMerge branch 'bug/JAL-4344_structureimage_cl_arg_only_c...
2023-11-30 Ben SoaresJAL-4344 careful application of -Djava.awt.headless...
2023-11-22 James ProcterJAL-4343 fix insufficient-caffeine error - add whats...
2023-11-22 James ProcterJAL-4343 release today, update notes for JAL-4348 and...
2023-11-22 James ProcterMerge branch 'patch/JAL-4345_pae_epas1_doubleclick...
2023-11-21 James ProcterJAL-4345 patch and release notes patch/JAL-4345_pae_epas1_doubleclick
2023-11-20 Ben SoaresJAL-4348 Add newer versions of Chimera and ChimeraX...
2023-11-20 James ProcterJAL-4343 patch for JAL-4347 uniprot non-pos feature...
2023-11-17 James ProcterJAL-4343 release notes for JAL-4340 and JAL-4243
2023-11-17 James ProcterJAL-4343 bump version
2023-11-16 Ben SoaresJAL-4243 Updated bio.tools record for 2.11.3.0
2023-11-16 Ben SoaresJAL-4340 Change launch scripts to be xresources to...
2023-11-15 James ProcterJAL-4090 JAL-4334 patch in release notes
2023-11-15 James ProcterMerge branch 'bug/JAL-4334_unknownstartenduniprotfeatur...
2023-11-15 James ProcterMerge branch 'patch/JAL-4222_100s_timeout_on_imagexport...
2023-11-15 James ProcterJAL-4273 actually pass startSeq etc on to rendering...
2023-11-15 James ProcterJAL-4090 fix up release notes new known issues
2023-11-15 James ProcterJAL-4222 bail if we wait too long for Jmol to save... patch/JAL-4222_100s_timeout_on_imagexport
2023-11-15 James ProcterJAL-4090 blocker patch JAL-3772 tidy up groovy console...
2023-11-15 James ProcterJAL-4090 JAL-4334 position status when start, end or... bug/JAL-4334_unknownstartenduniprotfeatures
2023-11-15 James ProcterJAL-4090 JAL-4338 known defect
2023-11-15 James ProcterJAL-4090 release 15th November 2023
2023-11-15 James ProcterJAL-4090 JAL-3858 fix up PAE docs - drop the EBI image...
2023-11-13 James ProcterJAL-4090 JAL-1551 source license
2023-11-13 James ProcterJAL-4090 relese date 14th Nov 2023
2023-11-13 James ProcterJAL-4236 don’t look for headers in JalviewJS
2023-11-13 James ProcterJAL-4336 set preferred dimensions for JTextBox workarou...
2023-11-13 James ProcterJAL-4090 fix JAL-4236 - just put the name of the class...
2023-11-13 James ProcterJAL-4331 construct and pass on overview title before...
2023-11-13 James ProcterJAL-4334 failing test using whole of Q29079 accession...
2023-11-09 Ben SoaresJAL-4090 minor missing word correction to whatsnew
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply
2023-11-03 James ProcterJAL-4090 tweak what’s new
2023-11-02 James ProcterJAL-4090 reported new known issue JAL-4328
2023-11-02 James ProcterJAL-4192 minimal specification of gradle version in...
2023-11-02 James ProcterJAL-4090 fix up release notes - add notes or JAL-4216...
2023-11-02 James ProcterJAL-4169 fix up urls to faq and documentation
2023-11-02 James ProcterJAL-4090 known issue report for JAL-4517
2023-11-02 James ProcterJAL-4090 release notes for JAL-1713 JAL-2528 and known...
2023-11-02 James ProcterJAL-4090 JAL-3921 release notes
2023-11-02 James ProcterMerge branch 'patch/JAL-3921_jmol_session_save' into...
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3921_jmol_session...
2023-11-02 James ProcterJAL-4217 wrap progress bar creation in an invokeLater...
2023-11-02 James ProcterJAL-3088 release notes JAL-4090
2023-11-02 James ProcterJAL-1551 formatting
2023-11-02 James ProcterMerge branch 'patch/JAL-3088_finalbracenotinrightplace...
2023-11-02 James ProcterMerge branch 'develop' into patch/JAL-3088_finalbraceno...
2023-11-02 James ProcterJAL-4090 update release date to friday 3rd November
2023-11-02 James ProcterJAL-4090 JAL-4293 JAL-4325 release notes
2023-11-02 James ProcterJAL-4090 JAL-4218 patch and release notes - don’t inclu...
2023-11-02 James ProcterJAL-4090 marked JAL-4290 as a knowndefect
2023-11-02 James ProcterJAL-4090 JAL-4110 JAL-3599 release notes
2023-11-02 James ProcterJAL-4090 JAL-4310 JAL-4298 JAL-4282 JAL-4223 release...
2023-11-02 James ProcterJAL-4090 JAL-4147 documentation for revised sequence...
2023-11-02 James ProcterJAL-4090 release notes for JAL-4304,JAL-4305 and JAL...
2023-11-02 James ProcterJAL-4289 JAL-4253 lower end of group boundary vertical...
2023-11-01 James ProcterJAL-4090 JAL-4281 JAL-4311 release notes
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