2005-05-19 |
jprocter | The archetypal Multiple Sequence Alignment Web Service |
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2005-05-12 |
amwaterhouse | conservation removed |
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2005-05-12 |
amwaterhouse | separator added |
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2005-05-12 |
amwaterhouse | corrections for find when edit takes place |
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2005-05-11 |
amwaterhouse | JalviewApplet jbuilder project |
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2005-05-11 |
amwaterhouse | output newick to textbox |
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2005-05-11 |
amwaterhouse | reads in treeFile from applet parameter |
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2005-05-09 |
amwaterhouse | paintComponent. not paint |
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2005-05-09 |
amwaterhouse | correct conservation errors after edit |
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2005-05-09 |
amwaterhouse | if imgWidth <0 |
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2005-05-06 |
amwaterhouse | wrap align correction for last row |
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2005-05-06 |
amwaterhouse | add 1 to fastPaint, in case seqs of different length |
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2005-05-06 |
amwaterhouse | if clustal + edit, make new clustal |
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2005-05-05 |
amwaterhouse | pdb end seq and startseq determined here |
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2005-05-05 |
amwaterhouse | colour by sequence just about works |
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2005-05-05 |
amwaterhouse | Accelerator on menu takes care of actionkey |
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2005-05-05 |
jprocter | Added cancel interface for JPred Client and fixed some... |
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2005-05-05 |
jprocter | Moved tree leafname to alignment set matching into... |
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2005-05-05 |
jprocter | <No Comment Entered> |
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2005-05-05 |
amwaterhouse | saveAs ..... |
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2005-05-05 |
amwaterhouse | saveAsNewick |
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2005-05-05 |
amwaterhouse | moved to jalview.io |
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2005-05-05 |
amwaterhouse | new place for sequencefeaturefetcher |
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2005-05-05 |
amwaterhouse | send rotCanvas sequence and viewport |
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2005-05-05 |
amwaterhouse | pdbfile details not essential to sequence |
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2005-05-05 |
amwaterhouse | addelement replaces add |
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2005-05-04 |
amwaterhouse | added remark about right mouse in awt |
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2005-05-04 |
amwaterhouse | validate and repaint after changing panels |
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2005-05-04 |
amwaterhouse | mouse listeners added |
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2005-05-04 |
amwaterhouse | renderer removed |
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2005-05-04 |
amwaterhouse | no need to send pid, seqnum |
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2005-05-04 |
amwaterhouse | SequenceRenderer changes |
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2005-05-04 |
amwaterhouse | no need to send vector pid or seqnum |
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2005-05-04 |
amwaterhouse | No need for this interface |
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2005-05-04 |
amwaterhouse | Applet files |
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2005-05-03 |
jprocter | Better treatment of error states and cancellability... |
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2005-05-03 |
amwaterhouse | formatAdapter.formatSequences and maintain annotation... |
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2005-05-03 |
amwaterhouse | formatAdapter.formats |
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2005-05-03 |
amwaterhouse | formatAdapter.readFile |
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2005-05-03 |
amwaterhouse | change Container to Component |
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2005-05-03 |
amwaterhouse | formatAdapter.formats, remove redundant code |
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2005-05-03 |
amwaterhouse | 1.1 compatible, formatting changes |
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2005-05-03 |
amwaterhouse | FormatAdapter readFile |
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2005-05-03 |
amwaterhouse | 1.1 compatible |
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2005-05-03 |
amwaterhouse | findKmers and fetchSequenceFeatures removed |
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2005-05-03 |
amwaterhouse | Removed as obfuscation of classes wiill change class... |
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2005-04-29 |
amwaterhouse | selects default colour |
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2005-04-29 |
amwaterhouse | just tidying up unused imports |
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2005-04-29 |
jprocter | stopped duplicate jars appearing in jalview.jar |
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2005-04-29 |
amwaterhouse | REad in defaultColour |
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2005-04-29 |
amwaterhouse | preferences held statically |
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2005-04-29 |
amwaterhouse | preferences moved to desktop |
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2005-04-29 |
amwaterhouse | read in preferences at start up |
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2005-04-28 |
jprocter | Added MuscleWS back in |
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2005-04-28 |
jprocter | First try with MuscleWS and vamsas.simple.objects |
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2005-04-28 |
jprocter | First try with MuscleWS |
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2005-04-28 |
amwaterhouse | no longer used |
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2005-04-28 |
amwaterhouse | Label changes as AF recommended |
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2005-04-28 |
amwaterhouse | must set consensus in child colourscheme |
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2005-04-28 |
amwaterhouse | Updated for use by preferences panel |
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2005-04-28 |
amwaterhouse | GUI changes |
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2005-04-28 |
amwaterhouse | Preferences panel added |
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2005-04-28 |
amwaterhouse | Viewport now looks at preferences when loading up |
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2005-04-28 |
amwaterhouse | Set fullscreen if in preferences |
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2005-04-28 |
amwaterhouse | can search ids |
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2005-04-28 |
amwaterhouse | set as default added |
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2005-04-28 |
amwaterhouse | search ids added |
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2005-04-28 |
amwaterhouse | Menu names changed |
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2005-04-28 |
amwaterhouse | JInternalFrame is within class. Method to load default... |
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2005-04-28 |
amwaterhouse | Preferences panel added |
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2005-04-28 |
amwaterhouse | set gap char modified |
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2005-04-28 |
jprocter | added MuscleWS and did a bit more standardisation of... |
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2005-04-25 |
amwaterhouse | if applet, load properties in void init |
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2005-04-25 |
amwaterhouse | +1 in fastpaint sends coloured text outofbounds |
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2005-04-25 |
amwaterhouse | dont update overview every repaint |
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2005-04-25 |
amwaterhouse | Loading alignment threaded |
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2005-04-25 |
amwaterhouse | Syncronize drawPanel, as overviewpanel is threaded |
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2005-04-25 |
amwaterhouse | Overviewpanel allows for large alignments |
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2005-04-21 |
amwaterhouse | add consslider to palette layer |
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2005-04-21 |
amwaterhouse | Allow for clipped region when printing |
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2005-04-21 |
amwaterhouse | Tick 5 and 10 marks |
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2005-04-21 |
amwaterhouse | Printing changes |
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2005-04-21 |
amwaterhouse | update conSlider when colour changes |
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2005-04-21 |
amwaterhouse | Allow for -open arg |
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2005-04-19 |
amwaterhouse | no need to keep setting selected, its on the palette... |
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2005-04-19 |
amwaterhouse | add splash to palette layer |
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2005-04-19 |
amwaterhouse | Printing of trees corrected. Antialiasing on |
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2005-04-18 |
amwaterhouse | painting syncronized, spin increments in units, not... |
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2005-04-18 |
amwaterhouse | wrap alignment box paints correctly |
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2005-04-18 |
amwaterhouse | blosum62 must have its on consensus |
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2005-04-18 |
amwaterhouse | setendres -1 |
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2005-04-18 |
amwaterhouse | position of bioinformatics |
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2005-04-18 |
amwaterhouse | set PNG antialiasing on |
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2005-04-18 |
amwaterhouse | show sliders when first selecting conservation,PID |
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2005-04-18 |
amwaterhouse | dont drag beyond end of alignment |
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2005-04-18 |
amwaterhouse | selected group draws last residue |
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2005-04-18 |
amwaterhouse | repaint removed |
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2005-04-18 |
amwaterhouse | fastPaint modified incase scroll is more than page... |
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2005-04-18 |
amwaterhouse | calls fontChanged |
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2005-04-18 |
amwaterhouse | fontChanged method added, componentListener removed |
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