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jalview.git
2005-08-15
amwaterhouse
Declare variables outside loops
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2005-08-15
amwaterhouse
Calculate gap and nogap ratio here
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2005-08-12
jprocter
fixed leafMapping bug for Id's like SequenceX (where...
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2005-08-09
amwaterhouse
Add notes on proxy settings
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2005-08-09
amwaterhouse
InstallAnywhere readme
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2005-08-09
amwaterhouse
New classes
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2005-08-09
amwaterhouse
Cache.getDefault
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2005-08-09
amwaterhouse
Proxy server, default browser, multiple links added
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2005-08-09
amwaterhouse
cache.getDefault
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2005-08-09
amwaterhouse
Try/catch loading default icons
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2005-08-09
amwaterhouse
Splash screen is repainted when checking latest version
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2005-08-09
amwaterhouse
Handle multiple url links
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2005-08-09
amwaterhouse
Can give a name to new browser window
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2005-08-09
amwaterhouse
Properties file is used in preference to viewport/cache...
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2005-08-09
amwaterhouse
Edit/add/delete a sequence link
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2005-08-09
amwaterhouse
Applet handles multiple sequence links
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2005-08-04
amwaterhouse
Add docs in build
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2005-08-03
amwaterhouse
Fix for user entering number in search window
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2005-08-03
amwaterhouse
Version 2.02
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2005-08-03
amwaterhouse
1 & -1
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2005-08-03
amwaterhouse
Trees aren't save in headless state in this version
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2005-08-03
amwaterhouse
Loading thread moved to io.FileLoader
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2005-08-03
amwaterhouse
Use Container to get fontMetrics
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2005-08-03
amwaterhouse
FileLoading removed from desktop
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2005-08-03
amwaterhouse
Can run headless=true
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2005-08-02
amwaterhouse
Use font.getName, not font.getFontName
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2005-07-29
amwaterhouse
Remove ref to ServletGUI
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2005-07-29
amwaterhouse
use 1 & -1 if start/end not specified
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2005-07-29
amwaterhouse
if endRes <1, calc the endRes
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2005-07-29
amwaterhouse
Correct label for end res in copy
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2005-07-19
amwaterhouse
v2.02
Release_2_02
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2005-07-18
amwaterhouse
backslash irrelevant in java
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2005-07-18
amwaterhouse
Copy seq ordering bug fixed
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2005-07-18
amwaterhouse
Output redirected to output.txt
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2005-07-18
amwaterhouse
Remove .txt, add command line instruction
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2005-07-12
amwaterhouse
homepage must have http:// at beginning
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2005-07-11
amwaterhouse
put jalview.jar first in jnlp
Release_2_01
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2005-07-11
amwaterhouse
Version changes
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2005-07-11
amwaterhouse
Jnlp info updated
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2005-07-11
amwaterhouse
Must check if group.sequences are null in remove gaps
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2005-07-11
amwaterhouse
Consume if enter pressed
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2005-07-11
amwaterhouse
Listen for return key
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2005-07-11
amwaterhouse
check groupsize is non zero
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2005-07-11
amwaterhouse
setIconImage
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2005-07-11
amwaterhouse
typo
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2005-07-11
amwaterhouse
image changed
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2005-07-11
jprocter
added help and documentation for annotation editing.
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2005-07-11
amwaterhouse
libraries??
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2005-07-11
amwaterhouse
Add test case if code version not found
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2005-07-11
amwaterhouse
Version changes
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2005-07-11
amwaterhouse
Write jalview.version in resources
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2005-07-11
amwaterhouse
this.installIcons
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2005-07-11
amwaterhouse
Release and build date methods changed
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2005-07-11
amwaterhouse
Writes .build_properties file for build date and version
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2005-07-07
amwaterhouse
Runs if no files to open and -nodisplay is not used
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2005-07-07
amwaterhouse
press del to cut
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2005-07-07
amwaterhouse
delete markers from start to end
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2005-07-07
amwaterhouse
Remove all gaps must check jSize
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2005-07-06
amwaterhouse
Remove group if sequences are null
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2005-07-06
amwaterhouse
Help file url changed
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2005-07-06
amwaterhouse
dont add null group
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2005-07-06
amwaterhouse
Sequence to Uppercase before checksum
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-30
amwaterhouse
Not used in Jalview
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2005-06-30
amwaterhouse
Put all libraries in Project space
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2005-06-30
amwaterhouse
dont check disk space, redirect stdout
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2005-06-30
amwaterhouse
wsld missing from cvs archive
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2005-06-20
amwaterhouse
readme
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2005-06-17
amwaterhouse
Target is 1.4
Release_2_0
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2005-06-16
jprocter
jalview-dev@jalview.org is the right email address?
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2005-06-16
jprocter
renamed menu for jPred to Jnet.
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2005-06-16
jprocter
separated alignment menu bits.
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2005-06-16
jprocter
more doco.
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2005-06-16
jprocter
moved clustal to clustalw
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2005-06-16
jprocter
lots of tidying in doco.
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2005-06-16
amwaterhouse
Moved to new repository
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2005-06-16
amwaterhouse
moved to new repository
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2005-06-16
amwaterhouse
InstallAnywhere config
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2005-06-16
jprocter
better clustalw reference
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2005-06-16
jprocter
export moved to its own file.
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2005-06-16
jprocter
export alignment
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2005-06-16
jprocter
feredoxin startup alignment with a tree.
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2005-06-16
jprocter
more menu doco.
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2005-06-16
amwaterhouse
dont add sequence twice to new group
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2005-06-16
amwaterhouse
Sort Groups modified
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2005-06-16
amwaterhouse
dont convert to uppercase
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2005-06-16
amwaterhouse
textarea replaces textfield - can cut and paste sequenc...
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2005-06-16
amwaterhouse
remove gaps applies to selected area
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2005-06-15
amwaterhouse
use .jalview.uniprot.xml
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2005-06-15
amwaterhouse
Check colours not null
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2005-06-15
amwaterhouse
check colourscheme is not null
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2005-06-15
amwaterhouse
paintrefresher
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2005-06-15
amwaterhouse
add/remove updated
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2005-06-15
amwaterhouse
Column selection changed
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2005-06-15
amwaterhouse
REmove commented out lines
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2005-06-15
amwaterhouse
allow for fastpaint
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2005-06-15
amwaterhouse
add / remove editable columns
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2005-06-15
amwaterhouse
Tooltip changed
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2005-06-15
jprocter
first jalarchive entry.
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2005-06-14
amwaterhouse
change name of uniprot file
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