jalview.git
2017-10-27 gmungocJAL-2792 include source in copy constructor; null point...
2017-10-27 gmungocJAL-2754 update to specify Java 1.8(+)
2017-10-27 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-10-27 gmungocJAL-2792 capture feature metadata and render in Feature...
2017-10-26 Jim ProcterJAL-2698 update version and cut release branch
2017-10-26 Jim ProcterJAL-2546 release notes
2017-10-26 Jim ProcterJAL-2488 patch causes of NPE during testStoreAndRecover...
2017-10-26 Jim ProcterMerge branch 'feature/JAL-2488finalize' into develop
2017-10-26 Jim ProcterJAL-2036 2.10.3 release notes
2017-10-26 Jim ProcterJAL-2793 cancelling font changed dialog didn't call...
2017-10-26 Jim ProcterJAL-2548 release notes
2017-10-26 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-10-26 gmungocJAL-2792 html table for Feature Details report
2017-10-26 Jim ProcterMerge branch 'bug/JAL-2776toggleGroupColour' into develop
2017-10-26 Jim ProcterJAL-2684 JAL-2685 release notes
2017-10-26 Jim ProcterJAL-2685 tidy up html doc
2017-10-26 Jim ProcterMerge branch 'features/JAL-2685pairwiseSeqLimits' into...
2017-10-26 Jim ProcterJAL-2392 test asserts for progressbar creation on the...
2017-10-25 Jim ProcterJAL-2617 release notes
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2617mappedStopCodon' into develop
2017-10-25 Jim ProcterJAL-2636 release notes
2017-10-25 Jim ProcterJAL-2667 release notes
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2667mouseWheelWrapped' into develop
2017-10-25 Jim ProcterJAL-2727 release notes
2017-10-25 Jim ProcterJAL-2727 add not to Test failed message recommending...
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into...
2017-10-25 Jim ProcterJAL-2732 JAL-1900 JAL-1625 release notes
2017-10-25 gmungocJAL-2743 fall back to parsing description if chromosome...
2017-10-25 Jim ProcterMerge branch 'bugs/JAL-2779_osx_dialogsequencingbroke...
2017-10-25 Jim ProcterJAL-2779 remove empty block and if statement
2017-10-25 Jim ProcterJAL-2790 JAL-2392 release notes
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into...
2017-10-25 Jim ProcterJAL-2790 provide a cancel button for JABAWS and AACon...
2017-10-25 Jim ProcterJAL-2392 auto boxing rather than explicit Long as key
2017-10-24 Jim ProcterJAL-2495 release notes
2017-10-24 gmungocJAL-2495 highlight all mapped sequences from structure...
2017-10-24 Jim ProcterJAL-2643 JAL-2524 release notes
2017-10-24 Jim ProcterJAL-2524 release notes
2017-10-24 Jim ProcterJAL-2733 JAL-2658 release notes
2017-10-24 Jim ProcterJAL-1980 release notes (retrodoc for 2.10.0)
2017-10-24 Jim ProcterJAL-2687 JAL-2608 release notes
2017-10-24 Jim ProcterMerge branch 'features/JAL-2608closeOverview' into...
2017-10-24 gmungocJAL-2743 slightly fancier species/assembly matching...
2017-10-24 gmungocJAL-2738 tidy Javadoc, remove debug logging
2017-10-24 gmungocJAL-2743 look up species and gene loci for Ensembl...
2017-10-24 Jim ProcterJAL-2542 release notes
2017-10-24 gmungocJAL-1739 Javadoc updated for Lambda expression parser...
2017-10-24 gmungocMerge branch 'develop' into features/JAL-1793VCF; lambd...
2017-10-24 gmungocJAL-2788 corrected merge error in propertyChange
2017-10-24 gmungocJAL-2787 set start/end seq explicitly for test
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop
2017-10-23 Jim ProcterJAL-2609 remove unused AlignPanel.fastPaint flag and...
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop
2017-10-23 Jim ProcterJAL-2768 release notes
2017-10-23 Jim ProcterJAL-2739 release notes
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2739' into develop
2017-10-23 Jim ProcterJAL-2682 release notes
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2682parseId' into develop
2017-10-23 gmungocJAL-2776 repaint everything on toggle group colour bug/JAL-2776toggleGroupColour
2017-10-23 Jim ProcterJAL-2253 release notes
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2253' into develop
2017-10-23 gmungocJAL-1854 keep fallthrough but with comment to suppress...
2017-10-23 gmungocJAL-1854 remove fallthrough of switch case (Checkstyle...
2017-10-23 gmungocJAL-2737 JAL-1854 corrected package suppressions, updat...
2017-10-20 Jim ProcterJAL-2779 keep a reference to original Aqua manager...
2017-10-20 Jim ProcterJAL-2779 remove OSX platform specific import (not neede...
2017-10-20 Jim ProcterMerge branch 'patch/JAL-547_pid_groovyscript' into...
2017-10-20 Jim ProcterJAL-547 fix NPE when no selection available
2017-10-20 Jim ProcterJAL-547 only generate matrix for current selection...
2017-10-20 Jim ProcterJAL-547 PID script in release notes
2017-10-20 Jim ProcterMerge branch 'patch/JAL-547_pid_groovyscript' into...
2017-10-20 Jim ProcterJAL-547 updated the PID script for 2.10.x series score...
2017-10-20 gmungocJAL-2253 pull up constant, additional unit test bug/JAL-2253
2017-10-20 gmungocJAL-2755 update caller for method rename!
2017-10-20 gmungocJAL-2609 fully erase scale above, tidy code change
2017-10-19 gmungocJAL-2609 adjustments for test findings
2017-10-19 gmungocJAL-2755 find gene loci for fetched xrefs where possible
2017-10-19 gmungocJAL-2755 put chromosomal dbref first in report
2017-10-19 gmungocJAL-2755 add lookup of cds/cdna gene loci
2017-10-19 gmungocJAL-2755 add species lookup
2017-10-19 gmungocJAL-2755 add missing Javadoc
2017-10-19 gmungocJAL-2755 rename EnsemblInfo as EnsemblData, add 'true...
2017-10-19 kiramtMerge branch 'develop' into bug/JAL-2609attemptedmerge
2017-10-18 Jim ProcterJAL-2779 switch order for updating the current alignmen...
2017-10-18 Jim ProcterJAL-2779 remove dead code
2017-10-18 Jim ProcterJAL-2779 hook in our own AquaInternalFrameManager when...
2017-10-18 Jim ProcterJAL-2779 JAL-1551 source formatting
2017-10-18 Jim ProcterJAL-2779 patch so closing most recent frame doesn’t...
2017-10-18 Jim ProcterJAL-2779 original version of AquaInternalFrame Manager
2017-10-18 Jim ProcterJAL-2782 remark about possible exception due to unsafe...
2017-10-18 Jim ProcterJAL-2777 JAL-2773 release notes
2017-10-18 Jim ProcterMerge branch 'bugs/JAL-2777_whitespaceChain' into develop
2017-10-18 Jim ProcterJAL-2777 remove duplicate code outside conditional...
2017-10-17 Jim ProcterJAL-2777 release notes
2017-10-17 Jim ProcterMerge branch 'features/JAL-2773_dontalwaysrecolourstruc...
2017-10-17 Jim ProcterJAL-2773 renamed flags for clarity
2017-10-17 Jim ProcterJAL-2777 patch for whitespace chain bugs/JAL-2777_whitespaceChain
2017-10-17 Jim ProcterJAL-2777 test for the whitespace chain
2017-10-17 Jim ProcterJAL-2481 patch to fix findFeatureColour for end-of...
2017-10-17 Jim ProcterJAL-2481 test correct behaviour of findFeatureColour...
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