jalview.git
2015-09-07 gmungocJAL-1636 translate stop codon as '*', mouseover * as...
2015-09-07 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-07 tcofoegbumerge
2015-09-07 tcofoegbuJAL-1831 updated BioJSON schema
2015-09-07 gmungocJAL-1152 check 'autocalculated' not 'null sequenceRef...
2015-09-07 Jim ProcterMerge branch 'features/JAL-857_dynamic-example-files...
2015-09-07 Jim ProcterJAL-1522 report commit id and branch in installation...
2015-09-07 Jim ProcterJAL-1522 make installation default 'applet' for the...
2015-09-07 Jim ProcterJAL-1701 added links to example files. will probably...
2015-09-06 Jim ProcterJAL-1655 transfer setting option only displayed in...
2015-09-06 Jim ProcterJAL-1368 JAL-1863 JAL-1304 reformatting and revision...
2015-09-06 Jim ProcterJAL-1368 JAL-1628 revise documentation in line with...
2015-09-06 Jim ProcterJAL-1645 JAL-1355 UI/i18n: added missing messages,...
2015-09-05 Jim ProcterJAL-1871 JAL-1553 don’t modify selection/view colour...
2015-09-05 Jim ProcterJAL-1871 choose a new RNA Helices palette when annotati...
2015-09-05 Jim ProcterJAL-1871 don’t change the palette every time an edit...
2015-09-05 Jim ProcterJAL-1871 reinstate random generation of palette when...
2015-09-05 Jim ProcterJAL-1869 make per-sequence RNA helix colours each time...
2015-09-05 Jim ProcterMerge branch 'bugfix/JAL-841_JAL-1081' into develop
2015-09-05 Jim ProcterJAL-1805 move misassigned test from Functional to Network
2015-09-05 Jim ProcterJAL-1233 tidy up and use same RNA helix colours in...
2015-09-05 Jim ProcterJAL-1081 JAL-891 don’t overwrite global colour scheme...
2015-09-05 Jim ProcterJAL-1081 JAL-841 JAL-1053 JAL-1081 use same selection...
2015-09-04 Jim ProcterJAL-1847 Merge branch 'thiago' into develop
2015-09-04 Jim ProcterJAL-1847 added AUTOSUPERIMPOSE property which can be...
2015-09-04 tcofoegbuJAL-793 added ability to visualise raw BioJSON in the...
2015-09-04 gmungocJAL-1859 jmolFindTarget not JmolFindTarget
2015-09-04 gmungocJAL-1859 embedded Jmol applet example updated for Jmol...
2015-09-03 Jim ProcterJAL-1863 allow RNA secondary structure rows exported...
2015-09-03 Jim ProcterJAL-961 efficiency TODO: decouple overview updates...
2015-09-03 Jim ProcterJAL-1680 JAL-1576 JAL-1233 all conservation and consens...
2015-09-03 Jim ProcterJAL-1576 fix: trigger broadcast of colour change with...
2015-09-03 Jim ProcterJAL-961 TODO use workers for calculations supporting...
2015-09-03 Jim ProcterJAL-1551 source tidy
2015-09-03 Jim ProcterJAL-1550 JAL-1551 formatting
2015-09-03 Jim ProcterJAL-1233 JAL-1576 copy constructor to propagate helix...
2015-09-03 tcofoegbuhouse keeping
2015-09-03 tcofoegbumerge
2015-09-03 tcofoegbuJAL-1861 disable the action buttons for 1500 millisec...
2015-09-03 gmungocJAL-1859 removed unneeded dependency on package not...
2015-09-03 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-03 gmungocJAL-1690 scaleProteinAsCdna new optional attribute...
2015-09-03 tcofoegbumerge
2015-09-03 tcofoegbuJAL-793 use default custom export settings for html...
2015-09-03 gmungocJAL-1828 lookup table to convert MSE to MET when parsin...
2015-09-03 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-02 tcofoegbuJAL-1835 updated documentation in preferences
2015-09-02 tcofoegbuJAL-1740 migrated BioJSMSAViewer git repo to https...
2015-09-02 tcofoegbumerge
2015-09-02 tcofoegbuJAL-1805 JAL-1700 house keeping
2015-09-02 tcofoegbuJAL-1739 reverted BioJSON schema to use one main versio...
2015-09-02 gmungocJAL-1544 spelling
2015-09-02 gmungocJAL-1355 User error text externalised to message bundle
2015-09-02 gmungocJAL-1768 set initial 'enabled' state for id width label...
2015-09-02 gmungocJAL-1264 test made i18n robust
2015-09-02 gmungocJAL-1768 enable fixed width output when auto-width...
2015-09-02 gmungocJAL-1843 fixed input/add from textbox; added @Override...
2015-09-02 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-02 tcofoegbumerge
2015-09-02 tcofoegbuJAL-1805 JAL-1782 added a draft documentation for TestN...
2015-09-02 Jim ProcterJAL-1853 add test to list for ant task
2015-09-02 gmungocJAL-1619 additions, standardised menu item symbols
2015-09-02 gmungocJAL-1681 mention of cDNA consensus added
2015-09-02 Jim ProcterJAL-535 todo: refactor logic to desktop controller...
2015-09-02 Jim ProcterJAL-1772 non-functional test added. not doing any more...
2015-09-02 gmungocJAL-1673 new test to verify transferRESNUMFeatures()
2015-09-02 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-01 Jim ProcterMerge branch 'bug/JAL-1853_gapchar_output' into develop
2015-09-01 Jim ProcterJAL-1853 add test to Functional group
2015-09-01 Jim ProcterJAL-1853 make getVisibleSeqs more memory efficient...
2015-09-01 Jim ProcterJAL-1853 refactor clip routine from getSequenceStrings
2015-09-01 Jim Procterpatch for JAL-1853 - use given gap character to reconst...
2015-09-01 Jim ProcterJAL-1853 test origin of gapChar bug in AlignView method
2015-09-01 gmungocJAL-1693 split frame opened for get xrefs, translate...
2015-09-01 Jim ProcterJAL-1853 test demonstrating bug
2015-09-01 gmungocJAL-1672 additional assertions added
2015-09-01 gmungocJAL-1355 user error message text externalised
2015-09-01 tcofoegbuJAL-1668 house keeping
2015-08-31 tcofoegbumerge
2015-08-31 tcofoegbuJAL-1700 updated error handling with suggested improvem...
2015-08-28 gmungocJAL-1836 temporary workaround for negative resNumIns...
2015-08-27 gmungocJAL-1270 comments added regarding required remote service
2015-08-27 gmungocJAL-1759 updated unit test for removal of trim on Atom...
2015-08-27 gmungocJAL-1830 tests relocated to AlignViewportTest after...
2015-08-27 gmungocJAL-1627 updated expected tooltip text in unit test
2015-08-27 gmungocJAL-1830 unit tests for removing (or not) mappings...
2015-08-27 gmungocJAL-1830 refactored so no jalview.gui references from...
2015-08-27 gmungocJAL-845 compacting duplicated code
2015-08-27 gmungocJAL-1611 debug sysout suppressed
2015-08-27 gmungocJAL-1544 message label corrected
2015-08-27 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-27 gmungocJAL-1701 help page for Split Frame view linked in
2015-08-27 Jim ProcterJAL-1844 adding more missing jars - jersey, other json...
2015-08-27 gmungocJAL-1544 'Jalview' consistently capitalised
2015-08-27 gmungocJAL-892 JAL-1764 Varna and Chimera also saved to projec...
2015-08-27 gmungocJAL-892 saved to project; external help link updated
2015-08-27 gmungocJAL-1727 added EBI mirror of DAS registry
2015-08-27 gmungocJAL-1596 JAL-1725 JAL-1588 updates for selection in...
2015-08-27 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-08-27 gmungocJAL-1725 restrict Jalview's Jetty server to localhost
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