jalview.git
2015-05-06 gmungocMerge branch 'Release_2_9_Branch' of https://source...
2015-05-06 gmungocJAL-1725 broadcast empty selection (to clear selection) features/JAL-1725chimeraListener
2015-05-06 gmungocJAL-1725 limit thread pool size; prefix /jalview to...
2015-05-06 gmungocJAL-1725 parse atomSpec with submodel; debug output...
2015-05-06 gmungocJAL-1725 fix for redirect of POST to GET, debug output...
2015-05-05 gmungocJAL-1725 jetty libraries added to classpath
2015-05-05 gmungocJAL-1725 first version of Jetty server / chimera select...
2015-05-01 tcofoegbuMerge branch 'bug/JAL-1700_PDB-rest-api-error-handling...
2015-05-01 tcofoegbuJAL-1700 Improved the error handling mechanism for...
2015-05-01 tcofoegbuMerge branch 'bug/JAL-1726_External-integration-test_PD...
2015-05-01 tcofoegbuJAL-1726 Added external integration test for PDB Rest API
2015-05-01 gmungocJAL-1684 hook added to test for fields ignored in copy...
2015-05-01 gmungocJAL-1690 refining 'copy format from' as applied to...
2015-05-01 gmungocJAL-1690 unused fields removed
2015-04-30 Mungo CarstairsJAL-845 reduced height to allow for Desktop decorators...
2015-04-30 tcofoegbuMerge branch 'bug/JAL-1717_make-pbd-id-case_insensitive...
2015-04-30 tcofoegbuJAL-1717 updated the PDBEntry model and updated the...
2015-04-29 gmungocJAL-1690 preserve scaling in New View, synch id width...
2015-04-29 gmungocJAL-1686 ViewStyle.hashCode implemented
2015-04-28 gmungocMerge branch 'Release_2_9_Branch' of https://source...
2015-04-28 gmungocJAL-1684 removed reflection from ViewStyle (to Junit...
2015-04-28 tcofoegbuMerge branch 'features/JAL-1714_specify-mulitple-id_PDB...
2015-04-28 tcofoegbuJAL-1711 and JAL-1714 documentation updated
2015-04-28 tcofoegbuMerge branch 'features/JAL-1714_specify-mulitple-id_PDB...
2015-04-28 tcofoegbuJAL-1711 and JAL-1714 documentation updated
2015-04-27 tcofoegbuMerge branch 'bug/JAL-1715_PDB-Search-selection-validat...
2015-04-27 tcofoegbuJAL-1715 implemented selection validation for the new...
2015-04-27 tcofoegbuMerge branch 'features/JAL-1714_specify-mulitple-id_PDB...
2015-04-27 tcofoegbuJAL-1714 improved the new PDB Sequence fetcher by enabl...
2015-04-27 Jim ProcterJAL-1645 Release_2_9 branch build tag
2015-04-27 gmungocMerge branch 'Release_2_8_3_Branch' of https://source...
2015-04-27 gmungocJAL-1691 more stable linked scrolling across split...
2015-04-24 tcofoegbuMerge branch 'features/JAL-1711_PDB-specify-chain'...
2015-04-24 tcofoegbuMerge branch 'Release_2_8_3_Branch' of https://source...
2015-04-24 tcofoegbuJAL-1710, JAL-1711 Bug fix for exception thrown when...
2015-04-24 gmungocJAL-1691 prevent propagation of scrolling on mouseover...
2015-04-24 tcofoegbuMerge branch 'bug/JAL-1707_retrieve-pdb-structure-for...
2015-04-24 tcofoegbuJAL-1707 bug fix - also search using sequence name
2015-04-23 gmungocJAL-1702 corrected check for 'no colours selected'
2015-04-23 gmungocJAL-1706 distinguish between 'font too small' and ...
2015-04-23 gmungocJAL-1681 create mappings before AlignFrame to ensure...
2015-04-23 gmungocJAL-845 only 'follow' sort command in coding complement...
2015-04-23 gmungocJAL-845 set split frame divider safely for eXpand Views
2015-04-23 gmungocMerge branch 'Release_2_8_3_Branch' of https://source...
2015-04-23 gmungocJAL-1706 fixed to correctly restore the last dialog...
2015-04-22 tcofoegbuJAL-1667_1668 updated help doc
2015-04-22 tcofoegbuMerge branch 'features/JAL-1667_1668-documentation...
2015-04-22 tcofoegbuJAL-1667_1668 added help documentation for PDB Sequence...
2015-04-22 gmungocJAL-845 fix SplitFrame sizing on eXpand Views
2015-04-22 gmungoc'Test' added to help identify "too small" font families...
2015-04-22 gmungocJAL-1690 fix NPE on Cancel when not in split frame
2015-04-21 tcofoegbuJAL-1667_1668 Updated documentation
2015-04-21 gmungocJAL-1693 mappings added back to the original alignment
2015-04-21 gmungocJAL-1702 wording improved; also some duplicate entries...
2015-04-21 tcofoegbuJAL-1667_1668 Documentation - Added a separate help...
2015-04-20 gmungocJAL-1690 shorter text to fit in FontChooser dialog
2015-04-20 gmungocJAL-1701 first draft of help page for Split View (not...
2015-04-17 tcofoegbuMerge branch 'bug/JAL-1697_browse-local-structures...
2015-04-17 tcofoegbuJAL-1697 added ablity to select/view cached structures... bug/JAL-1697_browse-local-structures
2015-04-17 tcofoegbuMerge branch 'bug/JAL-1698_Append-Structures' into...
2015-04-17 tcofoegbuJAL-1698 bug fix to enable addition of a single structu... bug/JAL-1698_Append-Structures
2015-04-17 tcofoegbuJAL-1668 updated documentation
2015-04-14 gmungocJAL-1693 generate multiple exon sequences for 1-many...
2015-04-14 tcofoegbuMerge branch 'bug/Jal-1696_disable-pdb_id-field-setting...
2015-04-14 tcofoegbuJAL-1696 disabled editing of PDB Id field from settings bug/Jal-1696_disable-pdb_id-field-settings
2015-04-14 tcofoegbuMerge branch 'Release_2_8_3_Branch' of https://source...
2015-04-13 gmungocJAL-1695 enableSplitFrame=true for applet example
2015-04-13 gmungocJAL-1690 adjusted wording
2015-04-13 gmungocJAL-1693 make exon alignment for get-xref splitframe...
2015-04-13 gmungocJAL-1681 work around ConcurrentModificationException...
2015-04-13 gmungocJAL-1690 show 'scale protein' in protein _and_ dna...
2015-04-13 gmungocJAL-1695 new property ENABLE_SPLIT_FRAME
2015-04-13 gmungocJAL-1695 parameter controls whether SplitFrame is enabled
2015-04-08 gmungocJAL-1684 adjusting parameters for split frame applet...
2015-04-08 gmungocJAL-1690 scaleProteinAsCdna new applet parameter documented
2015-04-08 gmungocJAL-1270 protection against NullPointer when run as...
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5...
2015-04-08 gmungocJAL-1270 separated standalone tests out of Jws2ParamVie...
2015-04-07 gmungocJAL-1270 test added
2015-04-07 gmungocJAL-1691 linked scrollling in split frame (Desktop)
2015-04-07 gmungocJAL-1691 defensive check for null
2015-04-02 gmungocJAL-1690 'scale protein as cDNA' options in Preferences...
2015-04-01 gmungocJAL-845 fixed start/end range of a mapped SequenceGroup
2015-04-01 gmungocJAL-1264 reinstate Show annotations menu item
2015-03-30 gmungocJAL-1264 remove broken applet build dependencies
2015-03-30 gmungocJAL-1270 fall back on compbio if no localhost:8080...
2015-03-30 gmungocJAL-1596 refactoring to allow unit tests to start and...
2015-03-30 gmungocJAL-1270 Cache.logger initialisation added
2015-03-27 tcofoegbuMerge branch 'merge/JAL-1667_PDBe_Search_API' into...
2015-03-27 tcofoegbuJAL-1667 updated the collection type for searchSummaryF...
2015-03-27 tcofoegbuMerge branch 'merge/JAL-1667_PDBe_Search_API' into...
2015-03-27 tcofoegbumerge commit
2015-03-26 tcofoegbuJAL-1667 updated parseJsonExceptionString method in... features/JAL-1667_PDBe_Search_API
2015-03-26 tcofoegbuUpdated BioJsHTMLOutputTest asserts to include error...
2015-03-26 tcofoegbuMerge branch 'Release_2_8_3_Branch' of https://source...
2015-03-26 tcofoegbuModified BioJsHTMLOutputTest to test specific json...
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-26 gmungocJAL-1688 compiler warnings removed
2015-03-26 gmungocJAL-1665 getSequenceFeatures; Desktop.getAlignFrames...
2015-03-25 gmungocJAL-1270 System.exit(0) changed to fail() so as not...
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