jalview.git
2019-11-05 Ben SoaresMerge branch 'Jalview-JS/develop' into Jalview-JS/devel...
2019-11-05 BobHansonnew transpiler - important!
2019-11-05 gmungocMerge branch 'Jalview-JS/develop' of https://source...
2019-11-05 soaresRevert "JAL-3210 default eclipse .project .classpath...
2019-11-05 gmungocJAL-3210 JAL-3130 skip Taskbar in JalviewJS
2019-11-05 gmungocJAL-3210 reverted (ignore previous commit)
2019-11-05 soaresMerge branch 'Jalview-JS/develop' into Jalview-JS/devel...
2019-11-05 gmungocJAL-3210 JAL-3130 can't read java.specification.version...
2019-11-05 gmungocJAL-3120 JAL-3130 can't read "java.specification.versio...
2019-11-05 gmungocJAL-3210 JAL-3330 use SequenceOntologyLite in JalviewJS
2019-11-05 soaresJAL-3210 default eclipse .project .classpath and .setti...
2019-11-05 gmungocJAL-3210 JAL-3263 redo 'Mandarin' character for JS...
2019-11-04 Ben SoaresJAL-3210 added a 'transfer' dir for unzip files to...
2019-11-01 Ben SoaresJAL-3210 Automatic buildship/eclipse update to site...
2019-10-31 Ben SoaresJAL-3210 Added jdt prefs from applet branch. Made IDE...
2019-10-31 Ben SoaresMerge branch 'Jalview-JS/develop' into Jalview-JS/devel...
2019-10-31 Ben SoaresJAL-3210 unimportant error message
2019-10-30 BobHansonJAL-3210 new transpiler fixes problem that it could...
2019-10-30 Ben SoaresJAL-3210 catch exception for eclipse
2019-10-30 Ben SoaresJAL-3210 _j2sclasslist.txt moved into swingjs
2019-10-30 Ben SoaresJAL-3210 Fixed jalviewjs dependencies. Changed linkChec...
2019-10-30 Ben SoaresJAL-3210 Fixed local.properties setting. Some tidying.
2019-10-30 Ben SoaresJAL-3210 firming up relative paths with jalviewDir...
2019-10-30 Ben SoaresJAL-3210 Some tidying and now using swingjs/*
2019-10-29 Ben SoaresJAL-3210 Now add/override gradle.properties with local...
2019-10-29 Ben SoaresMerge branch 'Jalview-JS/develop' into Jalview-JS/devel...
2019-10-29 Ben SoaresJAL-3210 tidying j2s and swingjs
2019-10-29 BobHansonMerge branch 'Jalview-JS/develop' of https://source...
2019-10-29 BobHansonJAL-3210 transpiler fix for package foo with path ...
2019-10-28 Ben SoaresJAL-3210 Added eclipse instance info in j2s-transpile...
2019-10-25 Ben SoaresJAL-3210 Tidied more build.gradle. Different j2s versio...
2019-10-25 Ben SoaresJAL-3210 Using j2s plugins that work for 4.12. net...
2019-10-25 Ben SoaresJAL-3210 Trying out new 3.2.4.08 j2s
2019-10-24 Ben SoaresJAL-3120 consistent paths/property interpolation in...
2019-10-24 Ben SoaresJAL-3210 Fixed cleaning tasks.
2019-10-23 Ben SoaresJAL-3210 changed .classpath in eclipse_files.zip
2019-10-23 soaresJAL-3210 some tidying
2019-10-23 Ben SoaresJAL-3210 Added .j2s creation task for Eclipse IDE
2019-10-23 Ben SoaresMerge branch 'Jalview-JS/develop_with_gradle_build...
2019-10-23 Ben SoaresJAL-3210 renamed jar for consistency
2019-10-23 soaresJAL-3120 Emergency eclipse files in case you don't...
2019-10-22 Ben SoaresJAL-3210 Better integration with Eclipse as IDE. FIXED...
2019-10-22 Ben SoaresJAL-3210 small fix for jalviewjsBuildDir
2019-10-22 Ben SoaresJAL-3210 project name explicitly set. updated README_GR...
2019-10-21 Ben SoaresJAL-3210 added absolute path for transpile log
2019-10-21 Ben SoaresJAL-3210 Improved/fixed the tempdir creation/storage...
2019-10-21 soaresJAL-3210 Different j2s plugin for different versions...
2019-10-21 soaresJAL-3210 Changed eclipse workspace dir to be a system...
2019-10-17 Ben SoaresJAL-3210 changed classes for net.sf.j2s.core
2019-10-17 Ben SoaresJAL-3210 Added site transfer dir. New net.sf.j2s.core...
2019-10-16 Ben SoaresMerge branch 'Jalview-JS/develop' into Jalview-JS/devel...
2019-10-15 soaresJAL-3210 Added README_GRADLE_JALVIEWJS-2019-10-15.md
2019-10-11 Ben SoaresJAL-3210 Just about working transpilation. Some work...
2019-10-10 Ben SoaresJAL-3210 Two fixed tests (previously not compiling)
2019-10-10 Ben SoaresJAL-3210 Moving j2s components around
2019-10-10 Ben SoaresJAL-3210 Two fixed tests (previously not compiling)
2019-10-10 Ben SoaresRevert "JAL-3210 Moving j2s components around"
2019-10-10 Ben SoaresJAL-3210 Moving j2s components around
2019-10-08 Ben SoaresJAL-3210 replacing j11lib/Jmol-14.29.17-no_netscape...
2019-10-08 Ben SoaresJAL-3210 removed netscape.javascript objects from Jmol...
2019-10-08 Ben SoaresJAL-3210 removed eclipse project, classpath and core...
2019-10-08 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-09-26 gmungocJAL-2481 remove code duplication left by merge
2019-09-26 gmungocJAL-3441 action double-click in Feature Type column...
2019-08-23 gmungocJAL-3141 correct cast of spinner value
2019-08-22 gmungocJAL-3187 case-insensitive codon variant calculation
2019-08-21 gmungocJAL-3187 minor code tidying, todo removal
2019-08-09 gmungocJAL-3187 removal of variant feature (non-virtual) trans...
2019-08-07 gmungocJAL-3187 (fudge) look in both alignments for stored... feature/JAL-3187linkedFeatures
2019-08-07 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
2019-07-31 gmungocJAL-3389 add .py to restored Chimera session filename...
2019-07-31 gmungocMerge branch 'bug/JAL-3388structureChooserSorting'...
2019-07-30 gmungocJAL-3198 more efficient Sequence.getDisplayId()
2019-07-30 gmungocJAL-3388 correct class for column 0 Ref Sequence bug/JAL-3388structureChooserSorting
2019-07-29 gmungocJAL-3386 correct wrapped width calculation for headless...
2019-07-29 gmungocJAL-3377 more reused of SeqCanvas.computeWrappedGeometry
2019-07-29 gmungocJAL-3377 add seq-annotations gap to cheight not to...
2019-07-29 gmungocJAL-3377 Javadoc added for getWrappedHeight()
2019-07-29 gmungocJAL-3377 corrected wrapped widths height for IdCanvas
2019-07-29 gmungocJAL-3377 include seq-annotation spacing in getWrappedHe...
2019-07-26 gmungocMerge branch 'features/JAL-3375vcfValidation' into
2019-07-26 gmungocJAL-1793 only decode specific special characters in...
2019-07-26 gmungocJAL-3376 capture VCF POS, ID, QUAL, FILTER as feature... features/JAL-3375vcfValidation
2019-07-26 gmungocJAL-3375 format validate VCF Integer and Float fields
2019-07-25 gmungocJAL-3375 ignore '.' values for VCF data
2019-07-16 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
2019-07-16 gmungocJAL-3144 better error message if no database selected
2019-07-16 gmungocMerge branch 'develop' into Jalview-JS/develop
2019-07-16 gmungocJAL-2987 tolerate null double values when formatting...
2019-07-16 gmungocJAL-3210 updated jmol jar in j8lib, j11lib
2019-07-16 gmungocJAL-3210 MCview now mc_view
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge
2019-07-15 gmungocUpdate to match develop to allow merge
2019-07-15 gmungocUpdate to latest to enable merge
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures
2019-07-10 Jim ProcterJAL-3289 bamboo properties for ‘BUILD’ getdown channel...
2019-07-10 Jim ProcterJAL-3289 bamboo properties for ‘BUILD’ getdown channel
2019-07-08 gmungocJAL-3187 derived peptide variants tweaks and tests
2019-07-05 gmungocJAL-3187 initial refactoring towards peptide variant...
2019-07-05 Ben SoaresJAL-1544 fixed a html encoding of '<' (%lt; -> &lt...
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