jalview.git
2005-01-10 amwaterhouseDisplays number of matches found in search
2004-12-17 amwaterhousejalview URL updated and authors in about file
2004-12-17 amwaterhouseMac osX doesnt like isControlDown, use alt instead
2004-12-17 amwaterhouseAll optionpane messages must be added to Desktop.desktop
2004-12-17 amwaterhouseIf screensize is small, setSize to be the screenSize
2004-12-17 amwaterhouseDoesn't draw the white box at the end of a line
2004-12-17 amwaterhouseFixed bug in editing by group
2004-12-17 amwaterhouseHide apply and undo buttons
2004-12-17 amwaterhouseUse the isGap method in utils
2004-12-16 amwaterhouseOutput new alignment bug fixed
2004-12-16 amwaterhouseilen and jlen no longer +1
2004-12-16 amwaterhouseRemove redundancy implemented
2004-12-15 amwaterhousecolours are right, but not the conservation bit!!
2004-12-15 amwaterhouseno need to send sequence to determine residue colour
2004-12-15 amwaterhouseAdded for the moment, only used by ClustalxColourScheme
2004-12-15 amwaterhouseNo need to sened sequence to determine residue colour
2004-12-15 amwaterhouseisGap method implemented in utils, and optimized
2004-12-15 amwaterhouseisGap method implemented in utils
2004-12-15 amwaterhouseGSlider replaces GConservationIncrementPanel
2004-12-15 amwaterhouseno more group editing mode. clustal implemented
2004-12-15 amwaterhouseDisplays full id with the help of nowrap
2004-12-15 amwaterhouseNew class
2004-12-15 amwaterhouseColourScheme no longer requires sequence
2004-12-15 amwaterhouseEnd of GroupEditing, GroupDefiningMode!!!!!
2004-12-15 amwaterhouseRegister with paintrefresher
2004-12-15 amwaterhouseIf selection altered, update RubberbandGroup
2004-12-15 amwaterhouseAll colours added, also sequence menu added
2004-12-15 amwaterhouseRight mouse brings up Popupmenu
2004-12-15 amwaterhouseColourScheme findColour no longer needs sequence
2004-12-15 amwaterhouseIf selection altered, update Rubberband group also
2004-12-15 amwaterhouseREpainting after graph panel setVisible fixed
2004-12-15 amwaterhouseSliderPanel added, edit is by mouse click
2004-12-15 amwaterhouseRemoved, SliderPanel replaces this class
2004-12-15 amwaterhouseisGap method added to utils
2004-12-14 amwaterhouseDont try{}catch the findColour method, lets fix this now
2004-12-14 amwaterhouseHTML ouput is now identical to onscreen view
2004-12-14 amwaterhouseEnable PID menuitem
2004-12-14 amwaterhousePID Colour scheme now operational!
2004-12-14 amwaterhouseAdd Jims name!
2004-12-14 amwaterhouseGetcolours is not needed ????
2004-12-14 amwaterhouseScalepanel has new constructor
2004-12-14 amwaterhouseIncrement panel must call globalcolour or seqeuncegroup...
2004-12-14 amwaterhouseAllow userdefined colours for groups
2004-12-14 amwaterhouseCan now select groups using column selection
2004-12-14 amwaterhouseUserdefinedcolours works for groups as well
2004-12-14 amwaterhouseHastable is not used anywhere
2004-12-14 amwaterhouseNew class for defining groups and selections
2004-12-14 amwaterhouseCopy, cut and move now done via popup menu
2004-12-14 amwaterhouseSelection of sequences is continuous
2004-12-14 amwaterhouseDrawing of group and rubberband corrected
2004-12-14 amwaterhouseSequence selection now done via popup menu
2004-12-14 amwaterhousemust allow for alignment width
2004-12-14 amwaterhouseCopy, move and delete now done via Popup menu
2004-12-14 amwaterhouseAddOrRemove function added, start and end res fixed
2004-12-14 amwaterhouseIf groups doesnt contain group, addition is allowed
2004-12-14 amwaterhouseHashtable size must allow for total-start
2004-12-14 amwaterhouseChoosing sort again reverses the sort order
2004-12-10 amwaterhouseNo longer exclusive to SequenceGroups
2004-12-10 amwaterhouseNow allows multi coloured HTML output
2004-12-10 amwaterhouseColours set globally in viewport
2004-12-10 amwaterhouseLooks to viewportfor global settings
2004-12-10 amwaterhouseAddition of rubberband
2004-12-10 amwaterhouseNow draws group, rubberband
2004-12-10 amwaterhousesequence selection modified
2004-12-10 amwaterhouseSELECTED IDS COLOURED LIGHT GRAY
2004-12-10 amwaterhouseCOnservationSelected and rubberband method setup
2004-12-10 amwaterhouseColour scheme new global implementation
2004-12-10 amwaterhouseColour etc is now globally set
2004-12-10 amwaterhouseCheck if sequence is in group before adding
2004-12-10 amwaterhouseUse cross platform lookandfeel
2004-12-03 amwaterhouseDont use updateResidueView
2004-12-03 amwaterhouseSpace char added
2004-12-03 amwaterhouseremove import of jbgui
2004-12-03 amwaterhousedefault gap char is -
2004-12-03 amwaterhousewont work at present, renderer is null
2004-12-03 amwaterhouseremove splashscreenclosing line
2004-12-03 amwaterhousePreparing for groupselect mode
2004-12-03 amwaterhouseav.charWidth is now an int
2004-12-03 amwaterhousesend SequenceGroup to renderer
2004-12-03 amwaterhousecharWidth is now an int
2004-12-03 amwaterhouseText alignment changes
2004-12-03 amwaterhouseAllow operation if no groups exist
2004-12-03 amwaterhouseColourscheme is null
2004-12-03 amwaterhouseinvalidate and validate after closing splashscreen
2004-12-03 amwaterhouseSpace added
2004-12-03 amwaterhouseAdd globalcolourscheme
2004-12-03 amwaterhouseSort groups bug fixed
2004-12-03 amwaterhouseNow has res start, res end
2004-12-03 amwaterhousedefault gap char is -. Getting ready for group select...
2004-12-02 amwaterhouseSearch on residue position and within selection
2004-12-02 amwaterhousesplashscreen activated
2004-12-02 amwaterhouseremoved divider from edit menu
2004-12-01 amwaterhouseSearch menu added
2004-12-01 amwaterhouseIf search results==null, displaySearch is false
2004-12-01 amwaterhouseWhen closed, highlightSearchResults( null )
2004-12-01 amwaterhouseshow search results added
2004-12-01 amwaterhouseshowinternal***dialog
2004-12-01 amwaterhousesearch function added
2004-12-01 amwaterhouserendergaps(boolean) function added
2004-12-01 amwaterhouseshowInternalInputDialog
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