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jalview.git
2019-07-31
gmungoc
Merge branch 'bug/JAL-3388structureChooserSorting'...
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2019-07-30
gmungoc
JAL-3198 more efficient Sequence.getDisplayId()
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2019-07-30
gmungoc
JAL-3388 correct class for column 0 Ref Sequence
bug/JAL-3388structureChooserSorting
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2019-07-29
gmungoc
JAL-3386 correct wrapped width calculation for headless...
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2019-07-29
gmungoc
JAL-3377 more reused of SeqCanvas.computeWrappedGeometry
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2019-07-29
gmungoc
JAL-3377 add seq-annotations gap to cheight not to...
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2019-07-29
gmungoc
JAL-3377 Javadoc added for getWrappedHeight()
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2019-07-29
gmungoc
JAL-3377 corrected wrapped widths height for IdCanvas
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2019-07-29
gmungoc
JAL-3377 include seq-annotation spacing in getWrappedHe...
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2019-07-25
gmungoc
JAL-3375 ignore '.' values for VCF data
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2019-07-16
gmungoc
JAL-2987 tolerate null double values when formatting...
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2019-07-10
Jim Procter
JAL-3289 bamboo properties for ‘BUILD’ getdown channel...
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2019-07-10
Jim Procter
JAL-3289 bamboo properties for ‘BUILD’ getdown channel
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2019-07-05
Ben Soares
JAL-1544 fixed a html encoding of '<' (%lt; -> <...
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2019-07-04
Jim Procter
JAL-3111 correct JVL appbase for 2.10.5 via getdown
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2019-07-04
Jim Procter
Merge branch 'task/JAL-3337-rm-lib-update-sourceDist...
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2019-07-04
Jim Procter
Merge branch 'develop' of source.jalview.org/git/jalvie...
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2019-07-04
Jim Procter
JAL-3337 round-and-round the process source files again
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2019-07-04
Jim Procter
JAL-3337 more includes and excludes
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2019-07-04
Jim Procter
JAL-3337 remove the old lib directory !
task/JAL-3337-rm-lib-update-sourceDist
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2019-07-04
Jim Procter
JAL-3337 rejig the source distribution generation to...
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2019-07-04
Jim Procter
JAL-3111 replace year in header for help pages and...
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2019-07-04
Ben Soares
JAL-3225 try/catch for non-deprecated/deprecated proper...
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2019-07-04
Ben Soares
JAL-3353 Change to build.gradle to use the file://...
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2019-07-04
gmungoc
Merge branch 'develop' of https://source.jalview.org...
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2019-07-04
gmungoc
JAL-3111 help pages minor corrections
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2019-07-04
Ben Soares
JAL-3348 fixed an internal href in help to allow building
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2019-07-04
Ben Soares
JAL-3337 adjusted building doc as sourceDist uses gradl...
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2019-07-04
Jim Procter
Merge branch 'task/JAL-3348_document_cli_memory_setting...
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2019-07-04
Jim Procter
JAL-3111 JAL-3348 JVL file documentation
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2019-07-04
Jim Procter
JAL-3348 revised bsoares memory settings documentation...
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2019-07-04
Ben Soares
Merge branch 'develop' into task/JAL-3348_document_cli_...
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2019-07-03
Ben Soares
JAL-3348 memory.html documentation finished for 2.11.0
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2019-07-03
Ben Soares
JAL-3348 jvmmempc in jvl file now works in linux
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2019-07-03
Ben Soares
JAL-3348 jvmmempc multiple values shouldn't be merged
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2019-07-03
Jim Procter
JAL-3111 tidy up lists/indentation for release notes
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2019-07-03
Jim Procter
JAL-3111 Java 11 only and 'onwards'
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2019-07-03
Jim Procter
JAL-3111 more whatsNew tweaks
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2019-07-03
Jim Procter
Merge branch 'task/JAL-3337_gradle_tasks_sourceDist_and...
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2019-07-03
Jim Procter
JAL-3111 more whats new
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2019-07-03
Ben Soares
JAL-3348 start of new memory setting text
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2019-07-03
Ben Soares
JAL-3348 jvmmempc allowed in jvl file
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2019-07-03
Ben Soares
Merge branch 'develop' into task/JAL-3348_document_cli_...
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2019-07-03
Jim Procter
Merge branch 'documentation/JAL-2843_featureFiltersForm...
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2019-07-03
Ben Soares
JAL-3348 prepping getdown to pass JVM command line...
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2019-07-02
Jim Procter
JAL-3111 updated what’s new… still more to come !
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2019-07-02
Jim Procter
JAL-3111 updated privacy statement to remove mention...
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2019-07-02
Jim Procter
JAL-3111 JAL-3150 revised Jalview archive documentation...
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2019-07-02
Jim Procter
JAL-3111 JAL-3348 removed pre 2.11 instructions on...
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2019-07-02
Jim Procter
JAL-3111 JAL-3280 hide the version check preference...
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2019-07-02
Jim Procter
JAL-3111 tidied up preferences dialog documentation
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2019-07-02
Jim Procter
JAL-3111 fix broken helpTOC link
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2019-07-02
Jim Procter
Merge branch 'tasks/JAL-3311_removeVamsasMenu' into...
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2019-07-02
Jim Procter
Merge branch 'develop' into tasks/JAL-3311_removeVamsasMenu
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2019-07-02
Ben Soares
Merge branch 'develop' into task/JAL-3337_gradle_tasks_...
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2019-07-02
Ben Soares
JAL-3337 Tidied up j8libs in THIRDPARTYLIBS. Replaced...
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2019-07-02
Jim Procter
JAL-3111 release date now 4th July 2019 - codename...
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2019-07-02
Jim Procter
Merge branch 'documentation/JAL-3111_release_211' into...
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2019-07-02
Jim Procter
JAL-3111 formatting
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2019-07-02
Jim Procter
JAL-3111 new known defect from JAL-797
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2019-07-02
Jim Procter
JAL-3111 release notes for JAL-2789 JAL-2744 JAL-1889...
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2019-07-02
Jim Procter
JAL-3111 whats new and JAL-2738 JAL-2743 expanded help...
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2019-07-02
Ben Soares
Merge branch 'develop' into task/JAL-3337_gradle_tasks_...
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2019-07-02
Ben Soares
JAL-3337 Excluding j11modDir from source distribution...
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2019-07-02
Ben Soares
JAL-3337 Updated the j11lib jars (don't need to be...
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2019-07-02
Jim Procter
JAL-3337 gradle.properties for publish help as html...
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2019-07-02
Jim Procter
JAL-3337 publish help as html pages with GA tracker...
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2019-07-02
Ben Soares
JAL-3337 starting to add to THIRDPARTYLIBS
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2019-07-01
Ben Soares
JAL-3322 increase concurrent downloads in getdown
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2019-07-01
Ben Soares
JAL-3333 removed unused variable
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2019-07-01
Ben Soares
JAL-3337 Added some more files to source tar.gz file
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2019-07-01
Ben Soares
JAL-3337 added gzip compression. Archive filename now...
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2019-07-01
Ben Soares
JAL-3322 getdown jars with network timeouts applied
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2019-07-01
Ben Soares
JAL-3332 Sensible default timeout values for network...
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2019-07-01
Ben Soares
JAL-3333 using floats for smoother weighting
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2019-07-01
Ben Soares
JAL-3337 added sourceDist task to gradle. Creates...
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2019-07-01
Ben Soares
JAL-3337 update to JAVA-11-README to state current...
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2019-07-01
Ben Soares
Merge branch 'develop' into task/JAL-3337_gradle_tasks_...
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2019-06-29
Ben Soares
JAL-3333 Sorry couldn't resist adding a bit of weightin...
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2019-06-29
Ben Soares
JAL-3333 Title text now appears instantly. Altering...
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2019-06-28
Ben Soares
Merge branch 'bug/JAL-3333_Blurry_fonts_in_WebServiceIn...
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2019-06-28
Ben Soares
JAL-3333 changed RGB model. Tested in mojave and Windo...
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2019-06-28
Jim Procter
JAL-3111 release notes for JAL-3330 JAL-3021 (tweak...
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2019-06-28
Ben Soares
JAL-3337 start of a Tar task
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2019-06-28
Jim Procter
Merge branch 'bug/JAL-3333_Blurry_fonts_in_WebServiceIn...
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2019-06-28
Jim Procter
JAL-3111 release notes for JAL-2820 JAL-2207
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2019-06-28
Jim Procter
JAL-3111 backed out report of fix to JAL-3178 in releas...
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2019-06-28
Jim Procter
JAL-3111 JAL-3340 JAL-3184 JAL-3338 new known defects
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2019-06-28
Ben Soares
JAL-3333 Smooth rotation of image now too
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2019-06-28
Jim Procter
Merge branch 'documentation/JAL-3111_release_211' into...
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2019-06-28
Jim Procter
JAL-3111 final release date for 2.11.0
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2019-06-28
Ben Soares
JAL-3333 added height to rotating image preferred size
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2019-06-28
Jim Procter
JAL-3330 apply Ensembl feature settings when showing...
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2019-06-28
Ben Soares
JAL-3333 Replaced title text rendered in animated image...
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2019-06-28
Ben Soares
JAL-3335 much improved getdown background images
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2019-06-28
Ben Soares
JAL-3322 Progress bar status tweaks
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2019-06-28
Ben Soares
JAL-3322 getdown Application class fix
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2019-06-28
Ben Soares
Merge branch 'develop' into JAL-3322_getdown_speed_impr...
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2019-06-28
Ben Soares
JAL-3322 corrected fix to convertBuildingMD task fail...
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2019-06-28
Ben Soares
Merge branch 'JAL-3322_getdown_speed_improvement' of...
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