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jalview.git
2018-02-10
kjvdheide
JAL-2797 standalone and embedded implementations of...
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2018-02-10
kjvdheide
JAL-2797 added adapter for the dummy frame listener
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2018-02-10
kjvdheide
JAL-2797 added the frame and listener interfaces
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2018-01-30
kjvdheide
JAL-2797 first attempt
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2018-01-25
kjvdheide
JAL-2844 removed resetting line drawing to keep line...
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2018-01-19
kjvdheide
JAL-2844 partitioning code made slightly clearer
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2018-01-19
kjvdheide
Revert "JAL-2852 added framework for saving as EPS...
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2018-01-04
kjvdheide
JAL-2871 added inputstream constructor to Configuration
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2017-12-15
kjvdheide
JAL-1953 JAL-2852 added public "paintFile" method
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2017-12-15
kjvdheide
JAL-1953 equals and hashCode now takes node ID in account
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2017-12-12
kjvdheide
JAL-2844 moved line drawing code
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2017-12-11
kjvdheide
JAL-1953 method made public for interfacing
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2017-12-08
kjvdheide
JAL-2844 work started on moving the graphical partition...
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2017-12-08
kjvdheide
JAL-2872 Undid inference disabling (done in Jalview...
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2017-12-05
kjvdheide
JAL-2805 JAL-281 JAL-2847 set tree file made public...
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2017-12-05
kjvdheide
JAL-2805 JAL-2847 JAL-281 getTreeFile made public
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2017-11-29
kjvdheide
JAL-2844 colouring subtree method made public
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2017-11-29
kjvdheide
JAL-2797 added simple check for parent desktop to closi...
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2017-11-27
kjvdheide
JAL-2853 fix small bug where the font of a not yet...
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2017-11-27
kjvdheide
JAL-2852 added framework for saving as EPS file
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2017-11-26
kjvdheide
JAL-2847 needed methods made public
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2017-11-20
kjvdheide
Merge remote-tracking branch 'forestergit/master' into...
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2017-11-20
kjvdheide
JAL-2805 added getFilename for Configuration
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2017-11-20
kjvdheide
JAL-281 added new createApplication with Phylogeny...
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2017-11-16
kjvdheide
JAL-2805 made needed color set methods public
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2017-11-15
cmzmasek
in progress
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2017-11-15
cmzmasek
added -rs option
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2017-11-15
cmzmasek
added -rs option
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2017-11-13
kjvdheide
JAL-2797 small start on creating either JFrame or JInte...
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2017-11-13
kjvdheide
JAL-1953 undid commenting out of message panels, should...
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2017-11-13
kjvdheide
JAL-2796 first (ugly) start on changing Forester's...
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2017-11-13
kjvdheide
JAL-2805 bunch of needed methods/constants made public
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2017-11-13
kjvdheide
JAL-2805 Archaeopteryx main returns its created MainFra...
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2017-11-08
kjvdheide
Made getters and setters for found nodes public (needed...
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2017-10-30
kjvdheide
removed unneeded import
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2017-10-28
kjvdheide
Changed more concrete DistanceMatrix references to...
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2017-10-28
kjvdheide
Added getValues and write to DistanceMatrix interface...
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2017-10-28
kjvdheide
Redid changing concrete references to matrixes to inter...
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2017-10-27
kjvdheide
Merge branch 'JalviewIntegration' of file:////Users...
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2017-10-26
kjvdheide
Merge branch 'master' of https://github.com/cmzmasek...
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2017-10-26
kjvdheide
capitalisation
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2017-10-25
cmzmasek
removed diamond operator
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2017-10-12
kjvdheide
Inference tab disabled and node frames now appear cente...
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2017-10-12
kjvdheide
disabled Archaeopteryx quit message
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2017-10-11
kjvdheide
More generic uses of DistanceMatrix instead of concrete...
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2017-10-11
kjvdheide
Use DistanceMatrix interface instead of the concrete...
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2017-10-11
kjvdheide
made PhyloInferenceDialog constructor refer to null...
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2017-10-11
kjvdheide
changed Mainframe from JFrame to JInternalFrame
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2017-09-20
cmzmasek
in progress...
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2017-09-20
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in progress...
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2017-09-19
cmzmasek
in progress...
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2017-09-19
cmzmasek
in progress...
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2017-09-15
cmzmasek
cladinator v1.04
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2017-09-15
cmzmasek
cladinator v1.04
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2017-09-15
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in progress...
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2017-09-13
cmzmasek
in progress...
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2017-09-13
cmzmasek
in progress...
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2017-09-11
cmzmasek
in progress
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2017-09-11
cmzmasek
in progress...
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2017-09-06
cmzmasek
added mapping
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2017-09-06
cmzmasek
added mapping
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2017-09-06
cmzmasek
in progress...
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2017-09-03
cmzmasek
in progress...
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2017-09-03
cmzmasek
old version...
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2017-09-03
cmzmasek
in progress...
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2017-08-30
cmzmasek
in progress...
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2017-08-30
cmzmasek
in progress...
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2017-08-30
cmzmasek
in progress...
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2017-08-23
cmzmasek
in progress...
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2017-08-23
cmzmasek
in progress...
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2017-08-23
cmzmasek
in progress...
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2017-08-22
cmzmasek
in progress....
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2017-08-21
cmzmasek
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2017-08-18
cmzmasek
in progress...
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2017-08-17
cmzmasek
in progress...
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2017-08-17
cmzmasek
in progress...
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2017-08-17
cmzmasek
in progress...
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2017-08-16
cmzmasek
in progress...
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2017-08-15
cmzmasek
in progress...
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2017-08-15
cmzmasek
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2017-08-11
cmzmasek
confidence output added
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2017-08-11
cmzmasek
tests...
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2017-08-11
cmzmasek
tests...
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2017-08-11
cmzmasek
in progress...
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2017-07-21
cmzmasek
first prototype
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2017-07-21
cmzmasek
first prototype
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2017-07-21
cmzmasek
In progress...
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2017-07-18
cmzmasek
updated
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2017-07-13
cmzmasek
updated
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2017-07-12
cmzmasek
in progress...
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2017-06-12
cmzmasek
analyze pplacer output...
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2017-06-12
cmzmasek
in progress..
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2017-06-09
cmzmasek
pplacer
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2017-06-09
cmzmasek
in progress...
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2017-06-09
cmzmasek
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2017-06-09
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2017-06-09
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2017-05-18
cmzmasek
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2017-05-16
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2017-05-11
cmzmasek
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