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jalview.git
2017-05-02 gmungocMerge branch 'develop' into features/JAL-2393customMatrices commit | commitdiff | tree | snapshot
2017-05-01 tcofoegbuMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-05-01 tcofoegbuJAL-2482 bug fix commit | commitdiff | tree | snapshot
2017-05-01 tcofoegbuJAL-2482 unit test for bug fix commit | commitdiff | tree | snapshot
2017-05-01 gmungocJAL-2489 JAL-2371 reinstate calls to commit | commitdiff | tree | snapshot
2017-05-01 gmungocMerge remote-tracking branch commit | commitdiff | tree | snapshot
2017-05-01 tcofoegbuJAL-2376 copied out patch from Phyre branch commit | commitdiff | tree | snapshot
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2393customMatrices commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 patch jalview/io/testProps.jvprops to show... features/JAL-1933_occupancy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 patch jalview/io/testProps.jvprops to show... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 don't show occupancy row when testing conserva... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 applet doc for showOccupancy parameter commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 desktop documentation for show occupancy prefe... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 use constant for preference token commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 consensus calculation doesn’t depend on occupa... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 desktop preferences for occupancy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 action and label for occupancy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 test for SHOW_OCCUPANCY .jalview_properties... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 showOccupancy applet parameter and SHOW_OCCUPA... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 only create and add occupancy row to alignment... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 fix: updated behaviour for SequenceGroup.findA... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 fixed behaviour for null parameters in line... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 javadoc for AnnotatedCollectionI.findAnnotations commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2494 test to cover AnnotatedCollectionI.findAnnotat... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'features/JAL-1933_occupancy' into develop commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2432 desktop: filter/select columns by threshold... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 JAL-2432 code tidy commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-2432 left justify value shown after adjusting thres... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 JAL-2432 percentile filter for select/hide... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 shade occupancy from light grey to black for... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 don’t show symbol counts under histogram ... commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterJAL-1933 occupancy row has a space below it for counts commit | commitdiff | tree | snapshot
2017-04-27 Jim ProcterMerge branch 'develop' into features/JAL-1933_occupancy commit | commitdiff | tree | snapshot
2017-04-26 kiramtMerge remote-tracking branch 'origin/features/JAL-2388h... commit | commitdiff | tree | snapshot
2017-04-26 kiramtJAL-2388 Update to hidden columns/column selection... commit | commitdiff | tree | snapshot
2017-04-26 kiramtMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-04-26 kiramtMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-04-26 kiramtMerge remote-tracking branch 'origin/features/JAL-2388h... commit | commitdiff | tree | snapshot
2017-04-26 kiramtJAL-2388 last separation of hidden columns/col selection commit | commitdiff | tree | snapshot
2017-04-26 kiramtJAL-2388 Tidies and unit tests commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuJAL-2489 edited unit test code comment commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuJAL-2489 Unit test for bug commit | commitdiff | tree | snapshot
2017-04-25 kiramtJAL-2388 Missed file from previous commit commit | commitdiff | tree | snapshot
2017-04-25 kiramtJAL-2388 Reverted and re-did applet changes commit | commitdiff | tree | snapshot
2017-04-25 kiramtJAL-2388 Tidies and other corrections so applet compiles commit | commitdiff | tree | snapshot
2017-04-25 kiramtJAL-2388 And corrected OverviewCanvas for applet commit | commitdiff | tree | snapshot
2017-04-25 kiramtJAL-2388 Updated applet to show/hide hidden regions... commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-04-25 tcofoegbuJAL-2489 bug fix commit | commitdiff | tree | snapshot
2017-04-25 kiramtJAL-2388 Working hidden regions hide/show in desktop commit | commitdiff | tree | snapshot
2017-04-24 gmungocJAL-2487 remove redundant refreshGUI to minimise thread... commit | commitdiff | tree | snapshot
2017-04-24 kiramtMerge remote-tracking branch commit | commitdiff | tree | snapshot
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-04-24 kiramtMerge remote-tracking branch 'origin/develop' into... commit | commitdiff | tree | snapshot
2017-04-24 kiramtJAL-2388 Finished split of hidden columns and selected... commit | commitdiff | tree | snapshot
2017-04-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices commit | commitdiff | tree | snapshot
2017-04-24 gmungocJAL-2424 final contig now an inclusive range bug/JAL-2424getVisibleContigs commit | commitdiff | tree | snapshot
2017-04-24 kiramtJAL-2439 Fixed opposite out-by-one problem in wrapped... commit | commitdiff | tree | snapshot
2017-04-24 kiramtMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2017-04-24 kiramtJAL-2439 Fix to hidden column marker being one row... commit | commitdiff | tree | snapshot
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection... commit | commitdiff | tree | snapshot
2017-04-21 gmungocJAL-2295 Spanish translations for superposition / errors commit | commitdiff | tree | snapshot
2017-04-21 gmungocJAL-2295 Spanish translations added commit | commitdiff | tree | snapshot
2017-04-21 gmungocJAL-2361 Spanish text added commit | commitdiff | tree | snapshot
2017-04-21 gmungocJAL-2423 tweak tree panel title, add Spanish text commit | commitdiff | tree | snapshot
2017-04-21 gmungocMerge branch 'develop' into features/JAL-2393customMatrices commit | commitdiff | tree | snapshot
2017-04-21 tcofoegbuJAL-2485 Bug fix to filter out uniprot response header... commit | commitdiff | tree | snapshot
2017-04-21 kiramtJAL-2388 Tidies commit | commitdiff | tree | snapshot
2017-04-21 kiramtJAL-2388 Make sure resizing still works commit | commitdiff | tree | snapshot
2017-04-21 kiramtJAL-2388 Alignment col and row collections with iterators commit | commitdiff | tree | snapshot
2017-04-19 gmungocJAL-2435 mirror font changes with middle mouse drag commit | commitdiff | tree | snapshot
2017-04-19 gmungocMerge branch 'develop' into features/JAL-2435splitScree... commit | commitdiff | tree | snapshot
2017-04-19 tcofoegbuJAL-2482 added null check commit | commitdiff | tree | snapshot
2017-04-19 kiramtMerge remote-tracking branch 'origin/develop' into commit | commitdiff | tree | snapshot
2017-04-18 tcofoegbuJAL-2482 Bugfix commit | commitdiff | tree | snapshot
2017-04-17 gmungocMerge branch 'develop' into features/JAL-2393customMatrices commit | commitdiff | tree | snapshot
2017-04-12 gmungocJAL-2361 tweak layout of warning message commit | commitdiff | tree | snapshot
2017-04-12 gmungocJAL-1632 removed check for aligned sequences for Tree... commit | commitdiff | tree | snapshot
2017-04-12 gmungocJAL-1632 remove unused check for sequences aligned commit | commitdiff | tree | snapshot
2017-04-12 gmungocJAL-2403 ensure array held in Matrix is immutable commit | commitdiff | tree | snapshot
2017-04-12 gmungocJAL-2403 public static methods to convert distance... commit | commitdiff | tree | snapshot
2017-04-12 gmungocJAL-1632 one PCA/Tree per panel, closed when panel... commit | commitdiff | tree | snapshot
2017-04-11 tcofoegbuPull from develop features/JAL-2473_set-minimium-dimensions commit | commitdiff | tree | snapshot
2017-04-11 kiramtJAL-2479 Moved some network-dependent unit tests into... bug/JAL-2479unitteststoNetworkGroup commit | commitdiff | tree | snapshot
2017-04-11 gmungocJAL-2403 improved ScoreModelI hierarchy as per Kira... commit | commitdiff | tree | snapshot
2017-04-11 tcofoegbuJAL-2473 removed unused fields in JalviewDialog commit | commitdiff | tree | snapshot
2017-04-11 gmungocJAL-2428 Javadoc commit | commitdiff | tree | snapshot
2017-04-11 gmungocMerge branch 'develop' into features/JAL-2393customMatrices commit | commitdiff | tree | snapshot
2017-04-10 gmungocJAL-2403 unit tests for PCA.computeSimilarity, signatur... commit | commitdiff | tree | snapshot
2017-04-10 tcofoegbuMerge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux... commit | commitdiff | tree | snapshot
2017-04-10 tcofoegbuJAL-2255 Bug fix bug/JAL-2255_seq-fetcher-broken-on-linux commit | commitdiff | tree | snapshot
2017-04-10 tcofoegbuMerge branch 'develop' into bug/JAL-2255_seq-fetcher... commit | commitdiff | tree | snapshot
2017-04-10 gmungocJAL-2403 removed remaining jvCalcMode references from PCA commit | commitdiff | tree | snapshot
2017-04-10 gmungocMerge branch 'develop' into features/JAL-2393customMatrices commit | commitdiff | tree | snapshot
2017-04-10 gmungocJAL-2416 test updated for reinstatement of '*' row... commit | commitdiff | tree | snapshot
2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom... commit | commitdiff | tree | snapshot
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