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jalview.git
2018-08-27 Ben SoaresJAL-3061 / JAL-3053 commit | commitdiff | tree | snapshot
2018-08-22 Jim ProcterJAL-2988 workaround for jalview save as dialogs - clear... commit | commitdiff | tree | snapshot
2018-08-22 Jim ProcterJAL-2988 JAL-2976 update to latest VAqua release: VAqua5 commit | commitdiff | tree | snapshot
2018-08-15 gmungocJAL-3080 remove tree partition if no groups created feature/JAL-3080clearTreeGroups commit | commitdiff | tree | snapshot
2018-08-14 gmungocJAL-3078 reset Tree font (only!) on Cancel bug/JAL-3078cancelTreeFont commit | commitdiff | tree | snapshot
2018-08-10 gmungocJAL-3018 updated to Ensembl REST 7.0 commit | commitdiff | tree | snapshot
2018-08-10 gmungocJAL-3076 refactor for more efficient scan of 'gene... commit | commitdiff | tree | snapshot
2018-08-10 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of... commit | commitdiff | tree | snapshot
2018-08-03 Ben SoaresJAL-3061 commit | commitdiff | tree | snapshot
2018-08-03 Ben SoaresMerge branch 'bug/JAL-3061_RNA_secondary_structure_anno... commit | commitdiff | tree | snapshot
2018-08-02 Ben SoaresJAL-3053 commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterMerge branch 'task/JAL-3047_clover2104b1_cherrypick... releases/Release_2_10_4_Branch commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 don't set classes unconditionally (forgot... task/JAL-3047_clover2104b1_cherrypick commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 don’t let the makedist task complete if a... commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 ‘cloverclasses’ build directory for instrument... commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 enable clover for testng commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 ignore clover output dir commit | commitdiff | tree | snapshot
2018-07-31 bsoaresStockholm file for test commit | commitdiff | tree | snapshot
2018-07-30 bsoaresFixed bug ignoring "alpha" extended braces in RNA SS... commit | commitdiff | tree | snapshot
2018-07-19 Jim ProcterMerge branch 'task/JAL-3047_clovercoverage' into develop commit | commitdiff | tree | snapshot
2018-07-19 Jim ProcterJAL-3047 don't set classes unconditionally (forgot... task/JAL-3047_clovercoverage commit | commitdiff | tree | snapshot
2018-07-17 bsoaresJAL-3065 commit | commitdiff | tree | snapshot
2018-07-12 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2018-07-02 Jim ProcterMerge branch 'task/JAL-3047_clovercoverage' into develop commit | commitdiff | tree | snapshot
2018-07-02 Jim ProcterJAL-3047 don’t let the makedist task complete if a... commit | commitdiff | tree | snapshot
2018-07-02 Jim ProcterJAL-3047 ‘cloverclasses’ build directory for instrument... commit | commitdiff | tree | snapshot
2018-06-27 Jim ProcterJAL-3047 enable clover for testng commit | commitdiff | tree | snapshot
2018-06-27 Jim ProcterJAL-3047 ignore clover output dir commit | commitdiff | tree | snapshot
2018-06-27 Jim ProcterJAL-3047 ant -Dclover.jar=../path/to/clover/lib/clover... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterMerge branch 'task/JAL-3042_remove_SimpleDocument_depen... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3042 remove mention of adjustable search box histor... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3042 don't allow user to change default history... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 removed jdas in libs documentation and noted... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 documentation in 2.11 release notes (and 2... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 remove DAS UI documentation commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterMerge branch 'tasks/JAL-3035_remove_dasobert_dependency... commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 - jalview-das is no more ! commit | commitdiff | tree | snapshot
2018-06-26 Jim ProcterJAL-3035 (unrelated) random XML error in nbbuild.xml commit | commitdiff | tree | snapshot
2018-06-07 Jim ProcterJAL-3009 release notes commit | commitdiff | tree | snapshot
2018-06-07 Jim ProcterMerge branch 'bugs/JAL-3009_blockingNetworkThreads... commit | commitdiff | tree | snapshot
2018-06-07 Jim ProcterJAL-2999 what's new and tweak release notes order commit | commitdiff | tree | snapshot
2018-06-07 gmungocJAL-2755 correct Javadoc and error handling commit | commitdiff | tree | snapshot
2018-06-07 gmungocJAL-2920 format/comment tidy commit | commitdiff | tree | snapshot
2018-06-07 gmungocJAL-2920 wrap description in <html/> if it includes... commit | commitdiff | tree | snapshot
2018-06-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' of https... commit | commitdiff | tree | snapshot
2018-06-06 gmungocJAL-2920 unit tests for 3 or more original or variant... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2999 refine release notes commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2999 release 2.10.4b1 on Thursday (promise!) commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 release notes commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 revised TODO for JAL-3025 bug/JAL-2920_uniprotvariantfeature commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 don’t output variant/original sequence as... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 JAL-3017 uniprot XML schema included in mappin... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-1920 JAL-3017 use newline not <br/> in description... commit | commitdiff | tree | snapshot
2018-06-06 gmungocJAL-3013 ensure Chimera as a symlink gets resolved commit | commitdiff | tree | snapshot
2018-06-05 Jim ProcterJAL-3009 news reader thread should be in background... bugs/JAL-3009_blockingNetworkThreads commit | commitdiff | tree | snapshot
2018-06-05 Jim ProcterJAL-3009 Identifiers.Org retrieval on background thread. commit | commitdiff | tree | snapshot
2018-06-04 gmungocJAL-2808 update test for revised treatment of 'mixed... commit | commitdiff | tree | snapshot
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList commit | commitdiff | tree | snapshot
2018-06-04 gmungocJAL-3018 updated REST versions to 6.3 commit | commitdiff | tree | snapshot
2018-06-04 Jim ProcterJAL-3017 parse multiple variant elements for uniprot... commit | commitdiff | tree | snapshot
2018-06-04 Jim ProcterJAL-2999 update release notes and patch date to 5th... commit | commitdiff | tree | snapshot
2018-06-02 Jim ProcterJAL-3017 parse multiple variant elements for uniprot... commit | commitdiff | tree | snapshot
2018-05-31 gmungocJAL-2808 don't capture or report min-max for mixed... commit | commitdiff | tree | snapshot
2018-05-31 gmungocJAL-2808 pre-fill numeric inequality filter with min... commit | commitdiff | tree | snapshot
2018-05-30 Jim ProcterJAL-2999 2.10.4b1 release 31st May commit | commitdiff | tree | snapshot
2018-05-28 gmungocMerge branch 'bug/JAL-797' into develop commit | commitdiff | tree | snapshot
2018-05-28 gmungocMerge remote-tracking branch 'origin/releases/Release_2... commit | commitdiff | tree | snapshot
2018-05-26 Jim ProcterJAL-2999 release date for 2.10.4b1 set for 27th May... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'documentation/JAL-2999_r2104b1' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2992panelHeight' into releases... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-1460_dragndropWindows' into relea... commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2992 simpler heuristic for available height bug/JAL-2992panelHeight commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2991_exporttosvgwrapview' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'feature/JAL-2994chimeraPath' into release... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 clarify release notes - and mention that short... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-2994 add a few future release points for good measu... feature/JAL-2994chimeraPath commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 temp variable for clearer conditional and... bug/JAL-1460_dragndropWindows commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 javadoc commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2995 tooltip on fields with double-click to browse... commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2994 temporary patch with paths to Chimera for... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-2999 issues resolved (or nearly so) for 2.10.4b1 commit | commitdiff | tree | snapshot
2018-05-24 gmungocJAL-2997 additional tests commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 tidied up the use of windows link file parser commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 more complete drag'n'drop debugging info and... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 process .lnk files dragged to Jalview when... commit | commitdiff | tree | snapshot
2018-05-24 Jim ProcterJAL-1460 new data flavor for URLs added belt-and-braces... commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2993 AlignFrame listen for keystrokes in OverviewPanel commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2997 unit test commit | commitdiff | tree | snapshot
2018-05-23 Jim Procterfix for JAL-2991 - we could do better :/ bug/JAL-2991_exporttosvgwrapview commit | commitdiff | tree | snapshot
2018-05-23 gmungocJAL-2997 handle tab-delimited trailing column number... commit | commitdiff | tree | snapshot
2018-05-23 Jim ProcterJAL-2999 release notes and version bump for jalview... commit | commitdiff | tree | snapshot
2018-05-23 Jim ProcterJAL-2895 replace $$Jalview-Version$$ in help.jhm with... commit | commitdiff | tree | snapshot
2018-05-21 gmungocJAL-797 Cmd-W act WHEN_IN_FOCUSED_WINDOW bug/JAL-797 commit | commitdiff | tree | snapshot
2018-05-21 gmungocJAL-2920 use HGVS notation for protein variant feature commit | commitdiff | tree | snapshot
2018-05-11 gmungocJAL-2986 corrected findIndex for out of range residue... commit | commitdiff | tree | snapshot
2018-05-11 gmungocJAL-2986 additional asserts for SequenceCursor updates commit | commitdiff | tree | snapshot
2018-05-11 gmungocJAL-2986 failing test added commit | commitdiff | tree | snapshot
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