jalview.git
2016-11-28 gmungocJAL-2344 added FileFormatI.isStructureFile()
2016-11-28 gmungocJAL-2345 cache generated ImageIcon per file path
2016-11-25 gmungocJAL-2344 dynamically determine recognised extensions...
2016-11-25 gmungocMerge branch 'develop' into trialMerge
2016-11-25 gmungocJAL-2344 override to ignore (obsolete?) JalviewFileView
2016-11-25 gmungocJAL-2344 use .equals() to compare FileFormatI objects
2016-11-25 gmungocJAL-2344 correct roundtrip test to exclude Jalview...
2016-11-24 gmungocDistinguish text-only output formats and others (.jar...
2016-11-24 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-24 Jim ProcterJAL-2325 exclude .class and .* files (install anywhere...
2016-11-24 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-24 Jim ProcterJAL-2325 applied BSD license for chimera/StrucViz2...
2016-11-24 gmungocFurther tweaks to get tests passing
2016-11-24 Jim ProcterJAL-2325 apply license to new source files
2016-11-24 Jim ProcterJAL-2325 update release date to next Tuesday
2016-11-24 gmungocFileFormatI further tweaks, clean compile
2016-11-24 Jim ProcterJAL-2325 tidy up release notes
2016-11-23 Jim ProcterJAL-2325 remove 2.10.0 what’s new
2016-11-23 Jim ProcterJAL-2325 latest release to 2.10
2016-11-23 Jim ProcterJAL-1738 Ctrl/Cmd/Alt modifiers and mention that B...
2016-11-23 Jim ProcterJAL-1738 hint about using the task switching key combin...
2016-11-23 Jim ProcterJAL-1738 mention Ctrl/Cmd/Alt modifiers and mention...
2016-11-23 Jim ProcterJAL-1738 mention Ctrl or Cmd for toggle behaviour in...
2016-11-23 Jim ProcterJAL-2325 updated what’s new for 2.10.1
2016-11-23 Jim ProcterJAL-2325 reword ‘tame tooltip’ JAL-1723 release note
2016-11-23 Jim ProcterJAL-2325 rejig authors and add Kira
2016-11-23 Jim ProcterJAL-2282 JAL-2325 added link to help text from release...
2016-11-23 Jim ProcterJAL-2325 updated what’s new for 2.10.1
2016-11-23 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2016-11-23 Jim ProcterJAL-2282 revised docs about warning message.
2016-11-23 gmungocJAL-1738 Spanish versions added
2016-11-23 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-23 Jim ProcterJAL-2325 JAL-2332 release notes
2016-11-23 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-23 Jim ProcterMerge branch 'bug/JAL-2323disulfideOverview' into develop
2016-11-23 Jim ProcterJAL-2325 moved disulphide/contact bug fixes (JAL-2323...
2016-11-23 Jim ProcterJAL-2325 release notes formatting
2016-11-23 Jim ProcterJAL-2325 release notes
2016-11-23 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-23 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2016-11-23 Jim ProcterJAL-2325 release notes
2016-11-22 Jim ProcterJAL-2197 changed tooltip for Jnet annotation rows to...
2016-11-22 tcofoegbuMerge branch 'bug/JAL-2277_refactorPrintUnwrapped'...
2016-11-22 Jim ProcterMerge branch 'features/JAL-2177_update_jmol_to_14.6...
2016-11-22 Jim ProcterJAL-2325 update release date for 2.10.1

2016-11-22 Jim ProcterMerge branch 'develop' into documentation/JAL-2325_rele...
2016-11-22 gmungocJAL-2337 fix: only adjust once for scroll offset bug/JAL-2277_refactorPrintUnwrapped
2016-11-22 gmungocJAL-1919 JAL-2177 handle empty pdbentries list correctly features/JAL-2177_update_jmol_to_14.6.4_2016.10.26
2016-11-22 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2016-11-22 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-22 tcofoegbuJAL-2322 added runnable interface to HTMLOutput class...
2016-11-22 Jim ProcterMerge branch 'features/JAL-1738_JAL-345_selectionfromhi...
2016-11-22 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2016-11-22 Jim ProcterJAL-1738 JAL-345 changed keystroke to ‘B’ (with modifie...
2016-11-22 gmungocJAL-2277 refactored AlignmentPanel.printUnwrapped to...
2016-11-21 tcofoegbuJAL-2277 bug fix for mis-alligned graphics output for...
2016-11-21 Jim ProcterJAL-2325 JAL-2118 2.10.0 patch in release note
2016-11-21 Jim ProcterJAL-2335 patched FeatureRendererModel.findFeaturesAtRes... bug/JAL-2323disulfideOverview
2016-11-21 Jim ProcterJAL-2335 failing test for FeatureRendererModel.findFeat...
2016-11-21 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-21 Jim ProcterMerge branch 'develop' into documentation/JAL-2325_rele...
2016-11-21 Jim ProcterJAL-2284 documentation for the new command-line option
2016-11-21 Jim ProcterJAL-2325 post-document JAL-2284 released in 2.10.0
2016-11-21 Jim ProcterJAL-2325 release notes for JAL-2317
2016-11-21 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-21 tcofoegbuJAL-2332 bugfix to enable structure chooser opening...
2016-11-21 gmungocJAL-2333 test beefed up with gaps
2016-11-21 Jim ProcterJAL-1888 JAL-2325 release 2.9.0b1 notes updated post...
2016-11-21 gmungocJAL-2333 corrected select columns with 'contact' feature
2016-11-21 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-21 Jim ProcterJAL-1723 release notes and note in documentation about...
2016-11-21 Jim ProcterJAL-2325 update release 2.10.0 release notes for JAL...
2016-11-21 gmungocMerge branch 'develop' into bug/JAL-2323disulfideOverview
2016-11-18 Jim ProcterMerge branch 'bug/JAL-98consensusMemory' into develop
2016-11-18 gmungocJAL-98 with the two types missing from last commit... bug/JAL-98consensusMemory
2016-11-17 gmungocJAL-2323 revert to thread-safe iteration over array...
2016-11-17 gmungocJAL-98 ProfilesI container for profiles for columns
2016-11-17 gmungocJAL-98 javadoc, third party acknowledgements (and very...
2016-11-17 gmungocJAL-2327 disulfide bond abstracted to SequenceFeature...
2016-11-17 gmungocJAL-2327 add isContactFeature
2016-11-16 Jim ProcterMerge branch 'features/JAL-1723_sequenceReport' into...
2016-11-16 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2016-11-16 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into...
2016-11-16 Jim ProcterJAL-2325 release notes for 2.10.1 - pass one
2016-11-16 kiramtMerge remote-tracking branch 'origin/bug/JAL-2282'...
2016-11-16 kiramtJAL-2282 Updated docs with information about when warni... bug/JAL-2282
2016-11-16 gmungocJAL-2323 render disulfide bond correctly on overview...
2016-11-16 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-16 tcofoegbuJAL-2322 JAL-2309 replaced references to isheadless...
2016-11-16 Jim ProcterJAL-2318 revised documentation for above PID Threshold
2016-11-16 gmungocJAL-2324 fix and tests for comparison of Float.NaN...
2016-11-16 gmungocJAL-2319 corrected reporting of SIFTS mapping
2016-11-16 Jim ProcterJAL-2177 remove signature from desktop library Jmol jar
2016-11-14 tcofoegbuJAL-2322 Refactored unified architecture for data ...
2016-11-11 tcofoegbuJAL-2277 Refactored out duplicated method - printUnwrap...
2016-11-11 Jim ProcterJAL-2177 remove Jmol project signature from jar so...
2016-11-10 tcofoegbuMerge branch 'bug/JAL-2317_jmol_chimera-chain-factorisa...
2016-11-10 tcofoegbuMerge branch 'develop' into bug/JAL-2317_jmol_chimera...
2016-11-10 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-11-10 tcofoegbuJAL-2317 Fixed Chimera command for hiding/showing disti... bug/JAL-2317_jmol_chimera-chain-factorisation
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