source.jalview.org Git - jalview.git/shortlog

git://source.jalview.org / jalview.git / shortlog

2006-03-20	jprocter	example jnlp file for users to edit and save locally	commit \| commitdiff \| tree \| snapshot
2006-03-17	jprocter	jnet method description correction.	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Fix for Finn Drablos bug. Must use equals for comparing...	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	historyItem.restore	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	HideSequences	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	getWidth and getHeight just once	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	-1 to drawGraphs	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	isVisible and hiddenboundary added	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	UserColors not used here	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Hidden Rows	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Reveal	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Faster	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Hide Sequences	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Tooltip for hidden columns	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Hidden column adjustments	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Scrolls when editing	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Gethidden sequences	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	HiddenSequence methods	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	getHiddenSequences	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Keeps a record of hidden sequences	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Allow loading from Zip files	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Load tree	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	CandP takes AlignFrame, not applet	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Fastpaint updates	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Check endres when drawing graphs	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Cut and paste may be inserted into Dialog frame	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Fastest implementation so far	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Extra argument false	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Scroll implemented for applet editing	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Selection Group rendering updated	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Reduced arguments for speed	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Can be used for user features	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Add new feature from seqrch results	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Feature rendering in groups	commit \| commitdiff \| tree \| snapshot
2006-03-16	amwaterhouse	Out of bounds check	commit \| commitdiff \| tree \| snapshot
2006-03-16	jprocter	added description of alignment quality scores and separated	commit \| commitdiff \| tree \| snapshot
2006-03-14	jprocter	methods for searching DBRef lists	commit \| commitdiff \| tree \| snapshot
2006-03-13	jprocter	fixes bug 0013013 but reveals lack of a 'features retri...	commit \| commitdiff \| tree \| snapshot
2006-03-13	jprocter	bug fix for 0013013	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Sequences can have a description	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Features may belong to a feature group	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	IdentifyFile should not be static	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Can read from zip file	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Blank space is white	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Reveal All added	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	<= fastPaints hidden columns	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Check for visibleGroup==null	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	IdentfyFile should not be static	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	RevealAllHiddenColumns	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Allow for hidden columns	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Able to read resources from Zip file	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Blank space is white	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	PASTE is constant in AppletFormatAdapter	commit \| commitdiff \| tree \| snapshot
2006-03-08	amwaterhouse	Pack resources in Zip file	commit \| commitdiff \| tree \| snapshot
2006-03-01	jprocter	fixed after refactoring of SequenceFeature[] seq.getSeq...	commit \| commitdiff \| tree \| snapshot
2006-03-01	jprocter	propagate SearchResult object use to MCView's highlight...	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	P1 changed to N1	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Add Annotation to specific sequence	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Cannot delete residues	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Features now array	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Keeps original threshold value	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	setShowSequenceFeatures	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	First attempt at hidden regions	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Less args, faster rendering	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Features now an array	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	First attempt to install hidden regions	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Use add seq feature instead of replacing existing features	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Features added	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Features now array for speed of rendering	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Use add feature instead of replacing existing values	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Features now array	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Use annotation colour for graph	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Make variable public for speed of rendering	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Features are now an array, not vector	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Typo	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Record of featuresDisplayed	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Inform user of groups error parsing	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Drawpanel needs fewer args	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Feature text mouse over modified	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	If overview, residues are gray	commit \| commitdiff \| tree \| snapshot
2006-02-24	amwaterhouse	Features are an array, rendering is faster	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	translate cDNA adjusted	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Dont colour gaps	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Read startgroup and endgroup in features file	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Incorporated threshold slider	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	SliderPanel removed	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	FeatureGroups added	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	ShowSeqFeatures selected	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Save featureGroup	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Use featureGroups from featureRenderer	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	No longer used for annotation gradient	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Fetch Sequence Features menu added	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Use original colour scheme as base for annotation colouring	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Allows saving of sequence description	commit \| commitdiff \| tree \| snapshot
2006-02-16	amwaterhouse	Typo	commit \| commitdiff \| tree \| snapshot
2006-02-15	amwaterhouse	Dont use FeatureFetcher if nucleotide	commit \| commitdiff \| tree \| snapshot
2006-02-15	amwaterhouse	Threshold single element	commit \| commitdiff \| tree \| snapshot
2006-02-15	amwaterhouse	Add new Feature	commit \| commitdiff \| tree \| snapshot
2006-02-15	amwaterhouse	Set as feature, not new group	commit \| commitdiff \| tree \| snapshot
2006-02-15	amwaterhouse	Saves and loads sequence description	commit \| commitdiff \| tree \| snapshot
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