git://source.jalview.org
/
jalview.git
/ shortlog
commit
grep
author
committer
pickaxe
?
search:
re
summary
| shortlog |
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
jalview.git
2005-02-02
amwaterhouse
Remove test image
commit
|
commitdiff
|
tree
|
snapshot
2005-02-02
amwaterhouse
Modified for wrappingAlignment
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Apply to all groups method added
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Update PID or conservationSlider if necessary
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Bugs in column selection fixed
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Conservation and PID colouring methods updated, also...
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Conservation and PID colouring methods updated
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Secondary panel is hidden for the moment
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Enable wrap menu item
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Ability to apply to all groups added
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
No need for drawableSequence
commit
|
commitdiff
|
tree
|
snapshot
2005-02-01
amwaterhouse
Clustal colours now work
commit
|
commitdiff
|
tree
|
snapshot
2005-01-28
amwaterhouse
New layout, works 1.4 and 1.5
commit
|
commitdiff
|
tree
|
snapshot
2005-01-27
amwaterhouse
correct border width
commit
|
commitdiff
|
tree
|
snapshot
2005-01-27
amwaterhouse
JavaHelp files added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-27
amwaterhouse
ColourSchemeKey now in documentation
commit
|
commitdiff
|
tree
|
snapshot
2005-01-25
amwaterhouse
system.exit or destroy if applet or app
commit
|
commitdiff
|
tree
|
snapshot
2005-01-25
amwaterhouse
change order of menuitems
commit
|
commitdiff
|
tree
|
snapshot
2005-01-25
amwaterhouse
don't system.ext
commit
|
commitdiff
|
tree
|
snapshot
2005-01-25
amwaterhouse
now has key listener
commit
|
commitdiff
|
tree
|
snapshot
2005-01-25
amwaterhouse
clustalColour bug fixed, clear selection
commit
|
commitdiff
|
tree
|
snapshot
2005-01-25
amwaterhouse
extends Applet
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
Adds regex.jar to classpath
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
warning! this is obfuscated
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
bug in compare fixed
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
returns color.white if the underlying colourscheme...
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
creates new groups when selecting branches of the tree
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
now uses 1.1 friendly regex
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
Clear selection when deleting all groups
commit
|
commitdiff
|
tree
|
snapshot
2005-01-24
amwaterhouse
Allow removal of colour when deleting groups
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
remove a few imports
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
Nucleotide colours added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
New colourScheme
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
Create group from search added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
Delete groups added, nucleotide color added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
ForegroundColor is darker.darker.darker
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
if stretchGroup is null, set avRubberbandGroup new...
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
<= y2 is now < y2
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
Commented out code removed
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
Fill rect white
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
Check if graphics is null in labelSize
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
False changed to true
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
SuperGroup added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
System.out removed
commit
|
commitdiff
|
tree
|
snapshot
2005-01-21
amwaterhouse
SuperGroups added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
new images
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
Clustal align DNA spinner added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
Fix overviewPanel bugs
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
RefreshPanels after a colour change
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
Dont use addToDesktop for splashscreen
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
ClustalX added to ColourProperties
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
SetSecondaryPanel
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
SetSecondaryPanel visible
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
Works out exisiting colur of a group
commit
|
commitdiff
|
tree
|
snapshot
2005-01-17
amwaterhouse
New class
commit
|
commitdiff
|
tree
|
snapshot
2005-01-15
jprocter
JBuilder Project file update
commit
|
commitdiff
|
tree
|
snapshot
2005-01-15
jprocter
Jemboss(emboss 2.9.0) classes to provide client functio...
commit
|
commitdiff
|
tree
|
snapshot
2005-01-15
jprocter
first jemboss clustalw client for jalview.
commit
|
commitdiff
|
tree
|
snapshot
2005-01-15
jprocter
support for jemboss server interaction.
commit
|
commitdiff
|
tree
|
snapshot
2005-01-15
jprocter
bugfix for writing fasta file without gap characters.
commit
|
commitdiff
|
tree
|
snapshot
2005-01-15
jprocter
Implemented clustal alignment via jemboss.
commit
|
commitdiff
|
tree
|
snapshot
2005-01-14
amwaterhouse
Spaces
commit
|
commitdiff
|
tree
|
snapshot
2005-01-14
amwaterhouse
Various color bugs sorted out
commit
|
commitdiff
|
tree
|
snapshot
2005-01-14
amwaterhouse
Dispalys rule along top of output
commit
|
commitdiff
|
tree
|
snapshot
2005-01-14
amwaterhouse
Hscrollbar is shortened
commit
|
commitdiff
|
tree
|
snapshot
2005-01-14
amwaterhouse
Return color.white if a gap char is detected
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
getValue method added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
Maintain PID or conservation status when changing colour
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
SequenceGroup is now an array
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
Send array of groups to renderer
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
Initial selection bug fixed
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
FindAllGroups added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
Scrollbar at bottom of screen
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
GetResidueBoxColour altered for faster rendering
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
Renderer already has graphics context
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
getResidueBoxColour has been removed for faster rendering
commit
|
commitdiff
|
tree
|
snapshot
2005-01-13
amwaterhouse
Ignores gaps when searching
commit
|
commitdiff
|
tree
|
snapshot
2005-01-12
jprocter
random change 3
commit
|
commitdiff
|
tree
|
snapshot
2005-01-12
jprocter
another dummy.
commit
|
commitdiff
|
tree
|
snapshot
2005-01-12
amwaterhouse
Group editing is done by control and alt key down
commit
|
commitdiff
|
tree
|
snapshot
2005-01-12
amwaterhouse
regular expression added
commit
|
commitdiff
|
tree
|
snapshot
2005-01-12
amwaterhouse
delete gaps bug fixed
commit
|
commitdiff
|
tree
|
snapshot
2005-01-12
amwaterhouse
must append file:/// at beginning of file launch
commit
|
commitdiff
|
tree
|
snapshot
2005-01-12
jprocter
irrelevant comment.
commit
|
commitdiff
|
tree
|
snapshot
2005-01-10
amwaterhouse
Displays number of matches found in search
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
jalview URL updated and authors in about file
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
Mac osX doesnt like isControlDown, use alt instead
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
All optionpane messages must be added to Desktop.desktop
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
If screensize is small, setSize to be the screenSize
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
Doesn't draw the white box at the end of a line
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
Fixed bug in editing by group
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
Hide apply and undo buttons
commit
|
commitdiff
|
tree
|
snapshot
2004-12-17
amwaterhouse
Use the isGap method in utils
commit
|
commitdiff
|
tree
|
snapshot
2004-12-16
amwaterhouse
Output new alignment bug fixed
commit
|
commitdiff
|
tree
|
snapshot
2004-12-16
amwaterhouse
ilen and jlen no longer +1
commit
|
commitdiff
|
tree
|
snapshot
2004-12-16
amwaterhouse
Remove redundancy implemented
commit
|
commitdiff
|
tree
|
snapshot
2004-12-15
amwaterhouse
colours are right, but not the conservation bit!!
commit
|
commitdiff
|
tree
|
snapshot
2004-12-15
amwaterhouse
no need to send sequence to determine residue colour
commit
|
commitdiff
|
tree
|
snapshot
2004-12-15
amwaterhouse
Added for the moment, only used by ClustalxColourScheme
commit
|
commitdiff
|
tree
|
snapshot
2004-12-15
amwaterhouse
No need to sened sequence to determine residue colour
commit
|
commitdiff
|
tree
|
snapshot
next