jalview.git
2006-02-15 amwaterhouseSet as feature, not new group
2006-02-15 amwaterhouseSaves and loads sequence description
2006-02-15 amwaterhouseKeeps up to date with featureRenderer
2006-02-15 amwaterhouseThreshold is single element
2006-02-15 amwaterhouseif shift down bug fixed
2006-02-15 amwaterhouseNo more supergroup, set Sequence name / Description
2006-02-15 amwaterhouseNew FEature replaces new group
2006-02-15 amwaterhouseThreshold is a single element
2006-02-15 amwaterhouseSetThreshold replaces addGraphLine
2006-02-15 amwaterhouseFeatureGroups added
2006-02-15 amwaterhouseRemoved SuperGroup
2006-02-15 amwaterhouseSave sequence description in VAMSAS sequence
2006-02-15 amwaterhouseCheck description and status are not null in mouse...
2006-02-15 amwaterhouseKeeps up to date with features
2006-02-15 amwaterhouseFeature replaces new superGroup
2006-02-15 amwaterhouseFeature Groups added
2006-02-15 amwaterhouseGraphline is a single line
2006-02-15 amwaterhouseFeatures file has startgroup, endgroup
2006-02-15 amwaterhouseNo longer used
2006-02-13 amwaterhouseMissing brace
2006-02-13 amwaterhouseParsing features file - dont adjust for alignment position
2006-02-10 amwaterhouseUpdate overview if features updated
2006-02-10 amwaterhouseOverview displays features
2006-02-09 amwaterhouseRemoved file
2006-02-09 amwaterhouseFeature Settings added to Applet
2006-02-09 amwaterhouseIf conservation is zero, colour is white
2006-02-09 amwaterhouseDrop target must initialise sequences
2006-02-09 amwaterhouseNew implementation for holding search results
2006-02-08 amwaterhouseparseResult takes the title as string. usually null
2006-02-08 amwaterhouseMake URL input window bigger
2006-02-08 amwaterhouseFormatAdapter throws exception
2006-02-08 amwaterhouseCheck endRes
2006-02-08 amwaterhouseCopy dataset annotations for paste(this)
2006-02-08 amwaterhouseColour above or below threshold
2006-02-08 amwaterhouseReport invalid chars
2006-02-03 amwaterhouseAdded graphtype
2006-02-03 amwaterhouseGraphtype added
2006-02-03 amwaterhouseConservation colouring does what it should always have...
2006-02-03 amwaterhouseMake java 1.1 compatible
2006-02-03 amwaterhouseSlight adjustments
2006-02-03 amwaterhouseFetch sequence(s)
2006-02-03 amwaterhouseJava 1.1 compatible
2006-02-03 amwaterhouseMany changes
2006-02-03 amwaterhouseSave and load graph type
2006-02-03 amwaterhouseMax size is 100 for conservation
2006-02-03 amwaterhouseRetrieves PFAM alignments
2006-02-03 amwaterhouseSlightly bigger for Mac
2006-02-03 amwaterhouseTooltip for multiple graph lines updated
2006-02-03 amwaterhouseset index of new annotation
2006-02-03 amwaterhouseAllow for non graph annotations in combobox
2006-02-03 amwaterhouseReading features files readded as ref to FeatureRendere...
2006-02-03 amwaterhousehas ref to annotation
2006-02-03 amwaterhouseAdd annotation with sequence ref updated
2006-02-03 amwaterhouseReads annotation files
2006-02-03 amwaterhouseApplet draws line graphs
2006-02-03 amwaterhouseApplet reads in annotation files
2006-02-03 amwaterhouseAA properties added
2006-02-03 amwaterhouseAA Properties
2006-02-03 amwaterhouseNew images
2006-02-03 amwaterhouseUpdated images
2006-02-03 amwaterhouseremoved
2006-02-03 amwaterhouseRemoved
2006-01-30 amwaterhouseCancel button is now close button
2006-01-30 amwaterhouseDont draw origin beyond end of alignment
2006-01-30 amwaterhouseNo need for apply button, just update colours when...
2006-01-30 amwaterhouseGet min and max colour added
2006-01-30 amwaterhouseCan be used for annotation colouring
2006-01-30 amwaterhouseFaster paint
2006-01-30 amwaterhouseUse Antialias flag
2006-01-30 amwaterhouseSmooth fonts added
2006-01-30 amwaterhouseNull sequence check
2006-01-30 amwaterhouseMonospaced indicator
2006-01-30 amwaterhouseUnix drag and drop implemented
2006-01-30 amwaterhouseGraphGroups added
2006-01-30 amwaterhouseFast paint update
2006-01-30 amwaterhouseAnti alias flag
2006-01-30 amwaterhouseDrop annotations onto alignment
2006-01-30 amwaterhouseSmooth fonts, annotation Colour
2006-01-30 amwaterhouseSmooth font option
2006-01-30 amwaterhouseAddAnnotation with start index
2006-01-30 amwaterhouseNew Class
2006-01-30 amwaterhouseNew files
2006-01-30 amwaterhouseFaster painting
2006-01-30 amwaterhouseAllow features in overview window
2006-01-30 amwaterhouseAllow embedded applet
2006-01-12 jprocterPIR file IO now preserves and parses Modeller style...
2006-01-12 jprocterDBRefEntry made for sequences retrieved from the PDB
2006-01-12 jprocter<No Comment Entered>
2006-01-12 jprocterensured properties are loaded before loggers are initia...
2006-01-11 jprocterrefactored Alignframe padGaps code to Alignment and...
2005-12-22 amwaterhouseCheck for null StringBuffer in getPDB
2005-12-22 amwaterhouseCheck for null StringBuffer in getPDB
2005-12-22 amwaterhouseJar file 20% smaller
2005-12-22 amwaterhouseReduced jar size by 20%
2005-12-22 amwaterhouseAllow embedded applet
2005-12-22 amwaterhousegraph now has type, not a boolean
2005-12-22 amwaterhouseWatch for trim left/right null widths
2005-12-22 amwaterhouseREGEX CANNOT BE STATIC
2005-12-22 amwaterhouseWrapped search scrolls to visible result
2005-12-22 amwaterhouseRemove import
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