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2017-01-23 Jim ProcterJAL-2349 test for ContactMatrixI/ContactListI/ContactLi... commit | commitdiff | tree | snapshot
2017-01-23 Jim ProcterJAL-2349 colour shade computation refactored to annotat... commit | commitdiff | tree | snapshot
2017-01-23 Jim ProcterJAL-2349 ContactMatrixI provided max/min getters commit | commitdiff | tree | snapshot
2017-01-23 Jim ProcterJAL-2349 Abstract logic for colouring and computing... commit | commitdiff | tree | snapshot
2017-01-22 Jim ProcterJAL-2349 bean holds mean and max for a range commit | commitdiff | tree | snapshot
2017-01-18 Jim ProcterJAL-2349 bean for getting max/min/avg for contact range commit | commitdiff | tree | snapshot
2017-01-17 Jim ProcterJAL-2349 rename ContactMatrixTest to SeqDistanceContact... commit | commitdiff | tree | snapshot
2017-01-17 Jim ProcterJAL-2349 javadoc dummy contact matrix commit | commitdiff | tree | snapshot
2017-01-17 Jim ProcterJAL-2349 better names for getColourForRange parameters commit | commitdiff | tree | snapshot
2017-01-16 Jim ProcterJAL-2349 JAL-2382 Contact prediction/CASP-RR importer commit | commitdiff | tree | snapshot
2017-01-16 Jim ProcterJAL-2349 JAL-2382 contact matrix datamodel object commit | commitdiff | tree | snapshot
2017-01-16 Jim ProcterJAL-2349 JAL-2382 example contact prediction in RR... commit | commitdiff | tree | snapshot
2016-12-12 Jim ProcterJAL-2349 fixed rendering method and switched to using... commit | commitdiff | tree | snapshot
2016-12-12 Jim ProcterJAL-2349 method to get display colour to represent... commit | commitdiff | tree | snapshot
2016-12-12 Jim ProcterJAL-2349 method to get contact intensity for given... commit | commitdiff | tree | snapshot
2016-12-05 Jim ProcterJAL-2349 contact map interface todo commit | commitdiff | tree | snapshot
2016-12-05 Jim ProcterJAL-2349 tidying commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 make debug message reporting renderer used... commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2349 contact renderer prototype (that doesn’t hang!) commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2349 add dummy contact for both applet and application commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 JAL-2349 make contact maps non-editable so... commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 adjustable height for any non-label render... commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 JAL-2349 refactored contact map renderer and... commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 contact map renderer refactored from hacked... commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 row renderer factory interface commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 row renderer interface commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2349 dummy contact matrix annotation row commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2349 interfaces and logic for adding contact matric... commit | commitdiff | tree | snapshot
2016-12-04 Jim ProcterJAL-2348 custom renderer type commit | commitdiff | tree | snapshot
2016-12-02 Jim Procterbasic hack to get (almost) equal height density plot commit | commitdiff | tree | snapshot
2016-11-30 Jim ProcterMerge branch 'features/JAL-2320_closeChimeraAction... commit | commitdiff | tree | snapshot
2016-11-30 gmungocJAL-2344 use ".cif" for saved mmCIF file (and refactor... commit | commitdiff | tree | snapshot
2016-11-29 gmungocJAL-2329 tests to confirm behaviour of Java extended... commit | commitdiff | tree | snapshot
2016-11-29 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2016-11-29 gmungocJAL-2344 corrected conversion of Type enum to FileFormat commit | commitdiff | tree | snapshot
2016-11-29 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-29 Jim ProcterJAL-2325 update release date in whatsNew commit | commitdiff | tree | snapshot
2016-11-29 gmungocJAL-2344 FileFormat.isStructureFile replaces commit | commitdiff | tree | snapshot
2016-11-29 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2016-11-29 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-28 gmungocMerge branch 'develop' into trialMerge commit | commitdiff | tree | snapshot
2016-11-28 Jim ProcterJAL-2325 JAL-1878 update minimum versions of JRE for... commit | commitdiff | tree | snapshot
2016-11-28 tcofoegbuMerge branch 'features/JAL-2326_JOptionPane-refactoring... commit | commitdiff | tree | snapshot
2016-11-28 gmungocJAL-2344 added FileFormatI.isStructureFile() commit | commitdiff | tree | snapshot
2016-11-28 gmungocJAL-2345 cache generated ImageIcon per file path commit | commitdiff | tree | snapshot
2016-11-28 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-28 Jim ProcterJAL-2325 finalise release notes commit | commitdiff | tree | snapshot
2016-11-25 gmungocJAL-2344 dynamically determine recognised extensions... commit | commitdiff | tree | snapshot
2016-11-25 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-25 Jim ProcterJAL-2325 JAL-2273 update vms bound to different installers commit | commitdiff | tree | snapshot
2016-11-25 Jim ProcterJAL-2325 more ignores on sourcedist build commit | commitdiff | tree | snapshot
2016-11-25 gmungocMerge branch 'develop' into trialMerge commit | commitdiff | tree | snapshot
2016-11-25 gmungocJAL-2344 override to ignore (obsolete?) JalviewFileView commit | commitdiff | tree | snapshot
2016-11-25 gmungocJAL-2344 use .equals() to compare FileFormatI objects commit | commitdiff | tree | snapshot
2016-11-25 gmungocJAL-2344 correct roundtrip test to exclude Jalview... commit | commitdiff | tree | snapshot
2016-11-24 tcofoegbuJAL-2326 added setup method for JvOptionPane in all... commit | commitdiff | tree | snapshot
2016-11-24 gmungocDistinguish text-only output formats and others (.jar... commit | commitdiff | tree | snapshot
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane commit | commitdiff | tree | snapshot
2016-11-24 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-24 Jim ProcterJAL-2325 exclude .class and .* files (install anywhere... commit | commitdiff | tree | snapshot
2016-11-24 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-24 Jim ProcterJAL-2325 applied BSD license for chimera/StrucViz2... commit | commitdiff | tree | snapshot
2016-11-24 gmungocFurther tweaks to get tests passing commit | commitdiff | tree | snapshot
2016-11-24 tcofoegbuJAL-2326 added layer of abstraction between Jalview... commit | commitdiff | tree | snapshot
2016-11-24 Jim ProcterJAL-2325 apply license to new source files commit | commitdiff | tree | snapshot
2016-11-24 Jim ProcterJAL-2325 update release date to next Tuesday commit | commitdiff | tree | snapshot
2016-11-24 gmungocFileFormatI further tweaks, clean compile commit | commitdiff | tree | snapshot
2016-11-24 Jim ProcterJAL-2325 tidy up release notes commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 remove 2.10.0 what’s new commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 latest release to 2.10 commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-1738 Ctrl/Cmd/Alt modifiers and mention that B... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-1738 hint about using the task switching key combin... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-1738 mention Ctrl/Cmd/Alt modifiers and mention... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-1738 mention Ctrl or Cmd for toggle behaviour in... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 updated what’s new for 2.10.1 commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 reword ‘tame tooltip’ JAL-1723 release note commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 rejig authors and add Kira commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2282 JAL-2325 added link to help text from release... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 updated what’s new for 2.10.1 commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2282 revised docs about warning message. commit | commitdiff | tree | snapshot
2016-11-23 gmungocJAL-1738 Spanish versions added commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 JAL-2332 release notes commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterMerge branch 'bug/JAL-2323disulfideOverview' into develop commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 moved disulphide/contact bug fixes (JAL-2323... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 release notes formatting commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 release notes commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterMerge branch 'documentation/JAL-2325_release2101' into... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2016-11-23 Jim ProcterJAL-2325 release notes commit | commitdiff | tree | snapshot
2016-11-22 Jim ProcterJAL-2197 changed tooltip for Jnet annotation rows to... commit | commitdiff | tree | snapshot
2016-11-22 tcofoegbuMerge branch 'bug/JAL-2277_refactorPrintUnwrapped'... commit | commitdiff | tree | snapshot
2016-11-22 Jim ProcterMerge branch 'features/JAL-2177_update_jmol_to_14.6... commit | commitdiff | tree | snapshot
2016-11-22 Jim ProcterJAL-2325 update release date for 2.10.1
 commit | commitdiff | tree | snapshot
2016-11-22 Jim ProcterMerge branch 'develop' into documentation/JAL-2325_rele... commit | commitdiff | tree | snapshot
2016-11-22 gmungocJAL-2337 fix: only adjust once for scroll offset commit | commitdiff | tree | snapshot
2016-11-22 gmungocJAL-1919 JAL-2177 handle empty pdbentries list correctly commit | commitdiff | tree | snapshot
2016-11-22 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
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