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jalview.git
2020-06-29 Jim ProcterJAL-3675 2.11.1.1 release notes commit | commitdiff | tree | snapshot
2020-06-29 Jim ProcterJAL-3493 clear search highlights when escape/deselect all commit | commitdiff | tree | snapshot
2020-06-29 Jim ProcterJAL-3493 failing test - creates a highlight and column... commit | commitdiff | tree | snapshot
2020-06-18 BobHansonJAL-3659 unnecessary duplication -- test is made in... commit | commitdiff | tree | snapshot
2020-06-18 BobHansonJAL-3446 unintentially left training message in code. commit | commitdiff | tree | snapshot
2020-06-17 Jim ProcterJAL-3662 JAL-3660 JAL-3561 source formatting commit | commitdiff | tree | snapshot
2020-06-17 Jim ProcterMerge branch 'cherrypicks/JAL-3660_JAL-3561_JAL-3662_cl... commit | commitdiff | tree | snapshot
2020-06-17 Jim ProcterJAL-3660 JAL-3561 output alignment as requested file... cherrypicks/JAL-3660_JAL-3561_JAL-3662_cli_outputformat commit | commitdiff | tree | snapshot
2020-06-17 Jim ProcterJAL-3561 JAL-3660 check resolved FileFormatI instances... commit | commitdiff | tree | snapshot
2020-06-17 Jim ProcterJAL-3561 failing test verifying expected fileformat... commit | commitdiff | tree | snapshot
2020-06-16 BobHansonJAL-3659 proper headless check; skips setProperty for JS commit | commitdiff | tree | snapshot
2020-06-16 BobHansonJAL-3662 simple fix for CLI not using right format... commit | commitdiff | tree | snapshot
2020-06-16 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-16 BobHansonJAL-3446 -- YEIKS! two checkURLLinks calls! commit | commitdiff | tree | snapshot
2020-06-16 gmungocMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-16 gmungocJAL-3583 better handling of null or empty tooltip on... commit | commitdiff | tree | snapshot
2020-06-16 gmungocJAL-3446 defer size calculations until panel added... commit | commitdiff | tree | snapshot
2020-06-16 BobHansonJAL-3446 proper call for headless state commit | commitdiff | tree | snapshot
2020-06-16 BobHansonJAL-3446 CommandLineOperation test commit | commitdiff | tree | snapshot
2020-06-16 BobHansonJAL-3446 CommandLineOperation test commit | commitdiff | tree | snapshot
2020-06-16 BobHansonJAL-3446 CTRL-DOWN check for headless operation commit | commitdiff | tree | snapshot
2020-06-15 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-15 BobHansonJAL-3657 SwingJS HashMap.putEntries() coding mistake. commit | commitdiff | tree | snapshot
2020-06-15 soaresJAL-3658 Now only making cores from utils/jalviewjs... commit | commitdiff | tree | snapshot
2020-06-15 gmungocJAL-3446 breaking change redacted commit | commitdiff | tree | snapshot
2020-06-15 gmungocMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-14 BobHansonJAL-3445 BSML BBB file format. commit | commitdiff | tree | snapshot
2020-06-14 BobHansonJAL-3653 SwingJS support for indeterminate JProgressBar commit | commitdiff | tree | snapshot
2020-06-13 BobHansonJAL-3487 Splash screen commit | commitdiff | tree | snapshot
2020-06-13 BobHansonJAL-3487 Splash screen commit | commitdiff | tree | snapshot
2020-06-13 BobHansonMerge branch 'Jalview-JS/develop.JAL-3445-BSML-reader... commit | commitdiff | tree | snapshot
2020-06-12 BobHansonJAL-3446 SwingJS update commit | commitdiff | tree | snapshot
2020-06-12 BobHansonJAL-3664 shortcuts in Desktop not working from AlignFrame commit | commitdiff | tree | snapshot
2020-06-12 soaresJAL-3446 fixing a bad merge, sorry commit | commitdiff | tree | snapshot
2020-06-12 soaresJAL-3446 separated out potential exceptions for simplif... commit | commitdiff | tree | snapshot
2020-06-12 BobHansonJAL-3446 removing mouse button test debug commit | commitdiff | tree | snapshot
2020-06-12 BobHansonSwingJS upgrade fixes AlignmentPanel keyPressed not... commit | commitdiff | tree | snapshot
2020-06-12 BobHansonJAL-3446 from applet -- reload; also fixes some repaint... commit | commitdiff | tree | snapshot
2020-06-11 gmungocJAL-3624 code tidy commit | commitdiff | tree | snapshot
2020-06-11 gmungocJAL-3624 unneeded import removed commit | commitdiff | tree | snapshot
2020-06-11 BobHansonJAL-3446 misplaced } removed drop and window listeners... commit | commitdiff | tree | snapshot
2020-06-11 BobHansonJAL-3446 no need for SHIFT_DOWN or ALT_DOWN masks commit | commitdiff | tree | snapshot
2020-06-11 BobHansonFirst try at merging didn't go so well. commit | commitdiff | tree | snapshot
2020-06-11 BobHansonMerge branch 'Jalview-JS/develop.JAL-3446.ctrlDown... commit | commitdiff | tree | snapshot
2020-06-11 BobHansonJAL-3446, JAL-3647 after first successful test run; commit | commitdiff | tree | snapshot
2020-06-10 BobHansonBamboo #36 checking component sizes commit | commitdiff | tree | snapshot
2020-06-10 BobHansonBamboo text #35 - simpler logic; avoids impossible... commit | commitdiff | tree | snapshot
2020-06-10 BobHansonBamboo test #3 The problem is not threading. It is... commit | commitdiff | tree | snapshot
2020-06-10 BobHansonBamboo test - setting method priorities commit | commitdiff | tree | snapshot
2020-06-10 BobHansonBamboo test 2 -- threads and stacktrace commit | commitdiff | tree | snapshot
2020-06-10 BobHansonSo close! Bamboo test commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3446 JAL-3645 tooltip testing not intended to be... commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3645 errant "g" in JavaDoc commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3446 from applet, JAL-3584 tooltip fixes <br> and... commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3446 SwingJS upgrade for html labels and tooltips... commit | commitdiff | tree | snapshot
2020-06-10 gmungocJAL-3446 more tweaks to tests failing on build server commit | commitdiff | tree | snapshot
2020-06-10 gmungocMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3446 tests - Popup/HTML changes in Applet commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3446 AlignViewportTest commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3446 Dynamic menu - Moves calc sortby tree item... commit | commitdiff | tree | snapshot
2020-06-10 BobHansonJAL-3446 SwingJS-site.zip for dynamic menus commit | commitdiff | tree | snapshot
2020-06-09 BobHansonJAL-3446 problem with Select-Find tooltip commit | commitdiff | tree | snapshot
2020-06-09 BobHansonJAL-3446 proposed dropdown fix commit | commitdiff | tree | snapshot
2020-06-09 gmungocJAL-3446 tearDown to fix unit test fail commit | commitdiff | tree | snapshot
2020-06-09 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-09 BobHansonJAL-3446 from applet; JAL-3374 commit | commitdiff | tree | snapshot
2020-06-09 BobHansonJAL-3446 from applet - Cache news date fix commit | commitdiff | tree | snapshot
2020-06-09 BobHansonJAL-3446 from JAL-3253-applet SequenceFetcher.getInsta... commit | commitdiff | tree | snapshot
2020-06-09 BobHansonJAL-3446 from JAL-3253-applet Tree Canvas bug fix commit | commitdiff | tree | snapshot
2020-06-08 soaresJAL-3446 old j8lib Jmol-14.29.17.jar removed. SHOULD... commit | commitdiff | tree | snapshot
2020-06-08 soaresJAL-3446 new Jmol 15.1.3 jar added to j11lib, old j11li... commit | commitdiff | tree | snapshot
2020-06-08 BobHansonJAL-3446 minor SwingJS-site.zip fixes; Assets. commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 AppletParams commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 rearranged parameters for JalviewJS API methods commit | commitdiff | tree | snapshot
2020-06-07 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 reorganized JalviewJSApp (accidentally put... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonreorganized JalviewJSApp (accidentally put that in... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 differences.txt now delivered with SwingJS... commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 JavaScript interface commit | commitdiff | tree | snapshot
2020-06-07 BobHansonJAL-3446 Desktop fix for embedding commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3446 no actual changes; just using meaningful frame... commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3446 adds Jmol viewer embedding. commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3446 adds Jmol viewer embedding. commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJmol 15.1.3 rebuilt commit | commitdiff | tree | snapshot
2020-06-06 BobHansonJAL-3379 JalviewJS-API specs - preliminary commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 embedded file for proper name matching commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 UrlDownloadClient and Test commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 Desktop JS needs getIdentifiersOrgData(); commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 forgot to escape Java in modified Platform... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 new Locale("") moved to Platform for review. commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 AlignmentSorter/Test more documentation... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 AlignmentSorter/Test fixed for instance commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 removes all JalviewJSApp dependency from jalvi... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonRefactoring of Jalview, JalviewAppLoader, JalviewApp... commit | commitdiff | tree | snapshot
2020-06-05 BobHansonSwingJS upgrade for JSUtil and JSUtilI commit | commitdiff | tree | snapshot
2020-06-05 BobHansonJAL-3446 new Jmol 15.1.3 jar commit | commitdiff | tree | snapshot
2020-06-04 Ben SoaresJAL-3225 Minor change to building.md for flexmark,... commit | commitdiff | tree | snapshot
2020-06-04 Ben SoaresJAL-3225 Removed dependency on command line pandoc... commit | commitdiff | tree | snapshot
2020-06-04 gmungocJAL-1191 reduce logging level for warnings commit | commitdiff | tree | snapshot
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