jalview.git
2017-10-27 gmungocJAL-2792 capture feature metadata and render in Feature...
2017-10-26 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-10-26 gmungocJAL-2792 html table for Feature Details report
2017-10-26 Jim ProcterJAL-2392 test asserts for progressbar creation on the...
2017-10-25 Jim ProcterJAL-2617 release notes
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2617mappedStopCodon' into develop
2017-10-25 Jim ProcterJAL-2636 release notes
2017-10-25 Jim ProcterJAL-2667 release notes
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2667mouseWheelWrapped' into develop
2017-10-25 Jim ProcterJAL-2727 release notes
2017-10-25 Jim ProcterJAL-2727 add not to Test failed message recommending...
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into...
2017-10-25 Jim ProcterJAL-2732 JAL-1900 JAL-1625 release notes
2017-10-25 gmungocJAL-2743 fall back to parsing description if chromosome...
2017-10-25 Jim ProcterMerge branch 'bugs/JAL-2779_osx_dialogsequencingbroke...
2017-10-25 Jim ProcterJAL-2779 remove empty block and if statement
2017-10-25 Jim ProcterJAL-2790 JAL-2392 release notes
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into...
2017-10-25 Jim ProcterJAL-2790 provide a cancel button for JABAWS and AACon...
2017-10-25 Jim ProcterJAL-2392 auto boxing rather than explicit Long as key
2017-10-24 Jim ProcterJAL-2495 release notes
2017-10-24 gmungocJAL-2495 highlight all mapped sequences from structure...
2017-10-24 Jim ProcterJAL-2643 JAL-2524 release notes
2017-10-24 Jim ProcterJAL-2524 release notes
2017-10-24 Jim ProcterJAL-2733 JAL-2658 release notes
2017-10-24 Jim ProcterJAL-1980 release notes (retrodoc for 2.10.0)
2017-10-24 Jim ProcterJAL-2687 JAL-2608 release notes
2017-10-24 Jim ProcterMerge branch 'features/JAL-2608closeOverview' into...
2017-10-24 gmungocJAL-2743 slightly fancier species/assembly matching...
2017-10-24 gmungocJAL-2738 tidy Javadoc, remove debug logging
2017-10-24 gmungocJAL-2743 look up species and gene loci for Ensembl...
2017-10-24 Jim ProcterJAL-2542 release notes
2017-10-24 gmungocJAL-1739 Javadoc updated for Lambda expression parser...
2017-10-24 gmungocMerge branch 'develop' into features/JAL-1793VCF; lambd...
2017-10-24 gmungocJAL-2788 corrected merge error in propertyChange
2017-10-24 gmungocJAL-2787 set start/end seq explicitly for test
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop
2017-10-23 Jim ProcterJAL-2609 remove unused AlignPanel.fastPaint flag and...
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2609attemptedmerge' into develop
2017-10-23 Jim ProcterJAL-2768 release notes
2017-10-23 Jim ProcterJAL-2739 release notes
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2739' into develop
2017-10-23 Jim ProcterJAL-2682 release notes
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2682parseId' into develop
2017-10-23 Jim ProcterJAL-2253 release notes
2017-10-23 Jim ProcterMerge branch 'bug/JAL-2253' into develop
2017-10-23 gmungocJAL-1854 keep fallthrough but with comment to suppress...
2017-10-23 gmungocJAL-1854 remove fallthrough of switch case (Checkstyle...
2017-10-23 gmungocJAL-2737 JAL-1854 corrected package suppressions, updat...
2017-10-20 Jim ProcterJAL-2779 keep a reference to original Aqua manager...
2017-10-20 Jim ProcterJAL-2779 remove OSX platform specific import (not neede...
2017-10-20 Jim ProcterMerge branch 'patch/JAL-547_pid_groovyscript' into...
2017-10-20 Jim ProcterJAL-547 fix NPE when no selection available
2017-10-20 Jim ProcterJAL-547 only generate matrix for current selection...
2017-10-20 Jim ProcterJAL-547 PID script in release notes
2017-10-20 Jim ProcterMerge branch 'patch/JAL-547_pid_groovyscript' into...
2017-10-20 Jim ProcterJAL-547 updated the PID script for 2.10.x series score...
2017-10-20 gmungocJAL-2253 pull up constant, additional unit test bug/JAL-2253
2017-10-20 gmungocJAL-2755 update caller for method rename!
2017-10-20 gmungocJAL-2609 fully erase scale above, tidy code change
2017-10-19 gmungocJAL-2609 adjustments for test findings
2017-10-19 gmungocJAL-2755 find gene loci for fetched xrefs where possible
2017-10-19 gmungocJAL-2755 put chromosomal dbref first in report
2017-10-19 gmungocJAL-2755 add lookup of cds/cdna gene loci
2017-10-19 gmungocJAL-2755 add species lookup
2017-10-19 gmungocJAL-2755 add missing Javadoc
2017-10-19 gmungocJAL-2755 rename EnsemblInfo as EnsemblData, add 'true...
2017-10-19 kiramtMerge branch 'develop' into bug/JAL-2609attemptedmerge
2017-10-18 Jim ProcterJAL-2779 switch order for updating the current alignmen...
2017-10-18 Jim ProcterJAL-2779 remove dead code
2017-10-18 Jim ProcterJAL-2779 hook in our own AquaInternalFrameManager when...
2017-10-18 Jim ProcterJAL-2779 JAL-1551 source formatting
2017-10-18 Jim ProcterJAL-2779 patch so closing most recent frame doesn’t...
2017-10-18 Jim ProcterJAL-2779 original version of AquaInternalFrame Manager
2017-10-18 Jim ProcterJAL-2782 remark about possible exception due to unsafe...
2017-10-18 Jim ProcterJAL-2777 JAL-2773 release notes
2017-10-18 Jim ProcterMerge branch 'bugs/JAL-2777_whitespaceChain' into develop
2017-10-18 Jim ProcterJAL-2777 remove duplicate code outside conditional...
2017-10-17 Jim ProcterJAL-2777 release notes
2017-10-17 Jim ProcterMerge branch 'features/JAL-2773_dontalwaysrecolourstruc...
2017-10-17 Jim ProcterJAL-2773 renamed flags for clarity
2017-10-17 Jim ProcterJAL-2777 patch for whitespace chain bugs/JAL-2777_whitespaceChain
2017-10-17 Jim ProcterJAL-2777 test for the whitespace chain
2017-10-17 Jim ProcterJAL-2481 patch to fix findFeatureColour for end-of...
2017-10-17 Jim ProcterJAL-2481 test correct behaviour of findFeatureColour...
2017-10-17 Jim ProcterJAL-2777 noticed exception raised on construction of...
2017-10-12 Jim ProcterJAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
2017-10-11 gmungocJAL-2609 tests updated for revised label width
2017-10-11 gmungocJAL-2772 check array bounds for sequence access bug/JAL-2772pdbArrayBounds
2017-10-11 gmungocJAL-2609 tidy label width code, some checkstyle warnings
2017-10-11 gmungocMerge branch 'bug/JAL-2742' into develop
2017-10-11 gmungocJAL-2742 set HiddenColumns null for no hidden coluns...
2017-10-11 Jim ProcterJAL-2757 release notes
2017-10-11 gmungocMerge branch 'bug/JAL-2757_uniprotftsbadquery' into...
2017-10-11 gmungocJAL-2757 fix PDB also; suppress stack trace and compile... bug/JAL-2757_uniprotftsbadquery
2017-10-11 kiramtJAL-2742 test updates following review
2017-10-11 kiramtJAL-2742 minor test updates following review
2017-10-11 gmungocJAL-2738 javadoc correction
2017-10-11 kiramtJAL-2742 removed unused getViewAsCigars
2017-10-11 kiramtJAL-2609attemptedmerge tidy
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