jalview.git
2024-08-07 Jim ProcterJAL-4447 standardised title formula for reporting score...
2024-08-07 Jim ProcterJAL-4446 reuse lasteta value
2024-08-07 Jim ProcterJAL-4159 JAL-789 report pasimap and pairwise alignment...
2024-08-07 Jim ProcterJAL-4159 suppress pairwise alignment display options...
2024-08-07 Jim ProcterJAL-4446 better reporting of ETA estimation - particula...
2024-08-06 Jim ProcterJAL-4446 avoid NPE when progress bar message is null
2024-08-05 Jim ProcterJAL-4446 .. missing methods for cancellable pasimap
2024-08-05 Jim ProcterJAL-4446 cancellable Pasimap - still need to make the...
2024-08-05 Jim ProcterJAL-4446 calculate and report PaSiMap ETA in progress bar
2024-08-05 Jim ProcterJAL-4446 allow progress bar message to be changed whils...
2024-08-05 Jim ProcterJAL-1551 apply GPLv3 for source files
2024-08-05 Jim ProcterJAL-1551 gradle spotlessApply and doc tweaks
2024-08-05 Jim ProcterMerge branch 'feature/JAL-3631_allow_jalview_to_work_fr...
2024-08-02 Ben SoaresJAL-3631 made Readlink-f work in powershell. Need...
2024-08-02 Jim ProcterJAL-4418 release note for JAL-3063 doc/jalview-projects.md
2024-08-02 Jim ProcterMerge branch 'feature/JAL-3631_allow_jalview_to_work_fr...
2024-08-02 Ben SoaresJAL-3631 update.sh script fixed to work in Windows...
2024-08-01 Ben SoaresJAL-3631 Administrator mode label on all screens of...
2024-08-01 Ben SoaresJAL-3631 Added a test for a specified update and a...
2024-08-01 Ben SoaresMerge branch 'develop' into feature/JAL-3631_allow_jalv...
2024-08-01 Ben SoaresJAL-3631 Small change to update.sh. update.ps1 NOT...
2024-08-01 Ben SoaresJAL-3631 Remove a debug echo
2024-08-01 Jim ProcterJAL-4445 - increase the fileglob expected counts
2024-08-01 Ben SoaresJAL-3631 Convert both CLASSPATHS in update.sh
2024-08-01 Ben SoaresJAL-3631 Separated jalview.sh and update.sh, and includ...
2024-08-01 Jim ProcterMerge branch 'feature/JAL-3631_allow_jalview_to_work_fr...
2024-07-31 Ben SoaresJAL-3631 Changes to bash launcher to allow headless...
2024-07-31 Ben SoaresJAL-3631 Add a (by-passable) confirmation and improved...
2024-07-31 Ben SoaresJAL-3631 Changes to Getdown to call getdown-launcher...
2024-07-31 Ben SoaresJAL-3631 Correction to a comment in build.gradle
2024-07-29 Ben SoaresJAL-3631 Add --updateuser and --updateinstallation...
2024-07-29 Ben SoaresJAL-3631 Small corrections
2024-07-29 Ben SoaresJAL-3631 Getdown acknowledges in output when only perfo...
2024-07-29 Ben SoaresJAL-3631 Ensure the DMG default vmoptions.txt has the...
2024-07-29 Ben SoaresJAL-3631 Add PID to console info - only available in...
2024-07-29 Jim ProcterJAL-4443 patch out pasimap in GUI for JalviewJS and...
2024-07-26 Ben SoaresJAL-3631 Added an --update option to the jalview.sh...
2024-07-26 Jim ProcterJAL-4418 updated release notes and release date to...
2024-07-26 Jim ProcterMerge branch 'feature/JAL-3631_allow_jalview_to_work_fr...
2024-07-26 Jim ProcterMerge branch 'patch/JAL-4428_osx_codesigning_scripts...
2024-07-26 Ben SoaresJAL-3631 Added verbose and quiet options, and matched...
2024-07-26 Ben SoaresJAL-3631 Some minor bugfixes to the install4j installer...
2024-07-25 Ben SoaresJAL-3631 Comprehensive install shell script for macos
2024-07-25 Ben SoaresJAL-3631 minor changes - spelling and comment spacing...
2024-07-24 Jim ProcterJAL-3063 added a brief description of how to update...
2024-07-24 Ben SoaresJAL-3631 Correct some text to add the file separator...
2024-07-23 Ben SoaresJAL-3631 Consolidated repeated code (mainly form verifi...
2024-07-22 Ben SoaresJAL-3631 Minor fixes to the advanced options scripts
2024-07-22 Ben SoaresJAL-3631 Made both Advanced options into a group. ...
2024-07-21 Ben SoaresJAL-3631 Improved tooltip on advanced options. Ensure...
2024-07-20 Ben SoaresJAL-3631 Group/box and simplify visibility of advanced...
2024-07-20 Ben SoaresJAL-3631 Consistently and correctly enable/diable/hide...
2024-07-19 Ben SoaresJAL-3631 Customise the user-space path in the install4j...
2024-07-18 Ben SoaresJAL-3631 Tweaks to getdown for updating and user appdir...
2024-07-18 Ben SoaresJAL-3631 Allow override of appDataPath with property...
2024-07-17 Ben SoaresJAL-3631 Extensive working of options in install4j...
2024-07-12 Jim Proctershorter hashes - just first seven characters.. like...
2024-07-12 Jim ProcterJAL-3631 updated getdown jars
2024-07-12 Jim ProcterJAL-3631 - report that an additional flag might be...
2024-07-12 Jim ProcterJAL-3631 shorter digest string for the unique user...
2024-07-12 Jim ProcterJAL-3631 check we actually created EnvConfig!
2024-07-12 Jim ProcterJAL-3631 updated getdown jars
2024-07-12 Jim ProcterJAL-3631 insert digest of full path to installer.appdir...
2024-07-03 Jim ProcterJAL-3631 rebuild getdown jars after merge to develop
2024-07-03 Jim ProcterMerge branch 'feature/JAL-3631_allow_jalview_to_work_fr...
2024-07-01 Ben SoaresJAL-3631 Slightly larger wizard
2024-07-01 Ben SoaresJAL-3631 Harden defence against looping getdown relaunc...
2024-06-29 Ben SoaresJAL-3631 JVL file with appbase now relaunches getdown
2024-06-28 Ben SoaresJAL-3631 Made an isAdmin flag to work in Windows Admin...
2024-06-28 Ben SoaresJAL-3830 Added some quotation marks to jalview.bat...
2024-06-28 Ben SoaresJAL-3631 Remove the checkboxes from the Finish screen...
2024-06-28 Ben SoaresJAL-3631 Group USERSPACE and SYSTEMSPACE tasks (and...
2024-06-28 Ben SoaresJAL-3631 Change in user path for locally installed...
2024-06-28 Ben SoaresJAL-3631 Change to Windows user-space default location...
2024-06-28 Ben SoaresJAL-3631 Fixed a getdown Exception when launching Jalvi...
2024-06-28 Ben SoaresJAL-3631 Adjustments to the Windows installer
2024-06-27 Ben SoaresJAL-3631 spelling correction
2024-06-27 Ben SoaresJAL-3631 Installers with separate actions for user...
2024-06-27 Ben SoaresJAL-3631 Add property to let log4j know we're not runni...
2024-06-27 Ben SoaresJAL-3631 Log4j logging to .jalview.log file when reques...
2024-06-25 Ben SoaresJAL-3631 JAL-3384 Install4j launch now redirects STDOUT...
2024-06-25 Ben SoaresJAL-3631 Use the icon file passed by install4j if a...
2024-06-25 Ben SoaresJAL-3631 Allow icon file name to be passed to launcher...
2024-06-25 Ben SoaresJAL-3631 Forgot to add this file for 'Change parity...
2024-06-25 Ben SoaresJAL-3631 Tests for version comparisons and Jar version...
2024-06-25 Ben SoaresJAL-3631 Change parity of comparison for convention
2024-06-24 Ben SoaresJAL-3631 Report getCanonicalPath for installer appdir
2024-06-24 Ben SoaresJAL-3631 Check Implementation-Version of getdown-launch...
2024-06-21 Ben SoaresJAL-3631 updated getdown jars
2024-06-21 Ben SoaresMerge branch 'develop' into feature/JAL-3631_allow_jalv...
2024-06-21 Ben SoaresJAL-3631 Changed label for consistency
2024-06-21 Jim ProcterMerge branch 'improvement/JAL-4409_implement_extra_sche...
2024-06-21 Ben SoaresMerge branch 'improvement/JAL-4409_implement_extra_sche...
2024-06-21 Ben SoaresJAL-4409 Add two empty args to getdown call from instal...
2024-06-21 Ben SoaresJAL-4409 Don't merge JVL configs when changing appbase improvement/JAL-4409_implement_extra_schemes_in_getdown
2024-06-20 Ben SoaresJAL-4409 Use fixed 'latest' artifact URL
2024-06-20 Ben SoaresJAL-4409 Changes in BUILD channel appbase to tie in...
2024-06-20 Ben SoaresJAL-3631 Now sending launcher.appdir from within getdown
2024-06-19 Ben SoaresJAL-3631 Rename/rationalise informational system proper...
2024-06-18 Ben SoaresJAL-3631 macos dev install script incorporated into...
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