jalview.git
2015-04-22 gmungocJAL-1690 fix NPE on Cancel when not in split frame
2015-04-21 gmungocJAL-1693 mappings added back to the original alignment
2015-04-21 gmungocJAL-1702 wording improved; also some duplicate entries...
2015-04-20 gmungocJAL-1690 shorter text to fit in FontChooser dialog
2015-04-20 gmungocJAL-1701 first draft of help page for Split View (not...
2015-04-17 tcofoegbuMerge branch 'bug/JAL-1697_browse-local-structures...
2015-04-17 tcofoegbuJAL-1697 added ablity to select/view cached structures... bug/JAL-1697_browse-local-structures
2015-04-17 tcofoegbuMerge branch 'bug/JAL-1698_Append-Structures' into...
2015-04-17 tcofoegbuJAL-1698 bug fix to enable addition of a single structu... bug/JAL-1698_Append-Structures
2015-04-14 gmungocJAL-1693 generate multiple exon sequences for 1-many...
2015-04-14 tcofoegbuMerge branch 'bug/Jal-1696_disable-pdb_id-field-setting...
2015-04-14 tcofoegbuJAL-1696 disabled editing of PDB Id field from settings bug/Jal-1696_disable-pdb_id-field-settings
2015-04-14 tcofoegbuMerge branch 'Release_2_8_3_Branch' of https://source...
2015-04-13 gmungocJAL-1695 enableSplitFrame=true for applet example
2015-04-13 gmungocJAL-1690 adjusted wording
2015-04-13 gmungocJAL-1693 make exon alignment for get-xref splitframe...
2015-04-13 gmungocJAL-1681 work around ConcurrentModificationException...
2015-04-13 gmungocJAL-1690 show 'scale protein' in protein _and_ dna...
2015-04-13 gmungocJAL-1695 new property ENABLE_SPLIT_FRAME
2015-04-13 gmungocJAL-1695 parameter controls whether SplitFrame is enabled
2015-04-08 gmungocJAL-1684 adjusting parameters for split frame applet...
2015-04-08 gmungocJAL-1690 scaleProteinAsCdna new applet parameter documented
2015-04-08 gmungocJAL-1270 protection against NullPointer when run as...
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5...
2015-04-08 gmungocJAL-1270 separated standalone tests out of Jws2ParamVie...
2015-04-07 gmungocJAL-1270 test added
2015-04-07 gmungocJAL-1691 linked scrollling in split frame (Desktop)
2015-04-07 gmungocJAL-1691 defensive check for null
2015-04-02 gmungocJAL-1690 'scale protein as cDNA' options in Preferences...
2015-04-01 gmungocJAL-845 fixed start/end range of a mapped SequenceGroup
2015-04-01 gmungocJAL-1264 reinstate Show annotations menu item
2015-03-30 gmungocJAL-1264 remove broken applet build dependencies
2015-03-30 gmungocJAL-1270 fall back on compbio if no localhost:8080...
2015-03-30 gmungocJAL-1596 refactoring to allow unit tests to start and...
2015-03-30 gmungocJAL-1270 Cache.logger initialisation added
2015-03-27 tcofoegbuMerge branch 'merge/JAL-1667_PDBe_Search_API' into...
2015-03-27 tcofoegbuJAL-1667 updated the collection type for searchSummaryF...
2015-03-27 tcofoegbuMerge branch 'merge/JAL-1667_PDBe_Search_API' into...
2015-03-27 tcofoegbumerge commit
2015-03-26 tcofoegbuJAL-1667 updated parseJsonExceptionString method in... features/JAL-1667_PDBe_Search_API
2015-03-26 tcofoegbuUpdated BioJsHTMLOutputTest asserts to include error...
2015-03-26 tcofoegbuMerge branch 'Release_2_8_3_Branch' of https://source...
2015-03-26 tcofoegbuModified BioJsHTMLOutputTest to test specific json...
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch
2015-03-26 gmungocJAL-1688 compiler warnings removed
2015-03-26 gmungocJAL-1665 getSequenceFeatures; Desktop.getAlignFrames...
2015-03-25 gmungocJAL-1270 System.exit(0) changed to fail() so as not...
2015-03-25 tcofoegbuJAL-1667 clean up commented codes in PopupMenu.java...
2015-03-25 tcofoegbuJAL-1668 Tab for summary config, auto refresh after...
2015-03-19 tcofoegbuJAL-1668 finally clean up
2015-03-18 Charles OfoegbuJAL-1668 house keeping
2015-03-18 Charles OfoegbuJAL-1668 added PDBDocFieldPreference for configuring...
2015-03-16 Charles OfoegbuJAL-1668 added validation for manual entry of pdb struc...
2015-03-15 Charles OfoegbuJAL-1667 updated test and internationalization messages
2015-03-09 Jim ProcterMerge branch 'features/JAL-1565_jpred4' into Release_2_...
2015-03-09 Jim ProcterJAL-1565 loading a concise file causes insertions to...
2015-03-06 Charles OfoegbuJAL-1668 added filtering and sorting capabilites
2015-03-06 Jim ProcterJAL-1683 bump version for r2.8.3 branch
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim Procterreassign features already created/documented for 2...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-03-06 Jim ProcterMerge commit '6797d65989b01c8fa5bdeaf6a66e35279b66a7f7...
2015-03-06 Charles OfoegbuJAL-1667 refactoring to support JAL-1668
2015-03-05 Jim ProcterJAL-1678 fix replace token for launchApp in a buildwq
2015-03-05 Jim ProcterJAL-1678 fix replace token for launchApp in a buildwq
2015-03-05 Jim ProcterJAL-1213 JAL-1395 add Jmol to JalviewLite classpath...
2015-03-05 Jim ProcterJAL-1678 add version parameter to example files in...
2015-03-05 Jim ProcterJAL-1678 add version parameter to example files in...
2015-03-05 Jim ProcterMerge branch 'bug/JAL-1643_File-chooser-improvement...
2015-03-05 Jim ProcterJAL-1643 add quaqua libs as OSX specific resources bug/JAL-1643_File-chooser-improvement
2015-03-04 Charles OfoegbuJAL-1668 First version JAL-1668
2015-03-02 Charles Ofoegbuhouse keeping
2015-02-27 Jim ProcterMerge branch 'bug/addcustomlaunchdesktopparams' into...
2015-02-27 Jim ProcterJAL-1678 - patch to make sure we only compare positions...
2015-02-27 Jim Procterfix for JAL-1678
2015-02-26 Charles OfoegbuJAL-1667 PDBe Search Interface implementation
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor
2015-02-12 Jim ProcterJAL-1350 added to 2.9 release notes
2015-02-12 Jim ProcterJAL-1350 document changed behaviour
2015-02-12 Jim ProcterJAL-1350 forgot to remove empty test
2015-02-12 Jim ProcterJAL-1350 pass the columnselection rather then selected...
2015-02-12 Jim ProcterJAL-1350 cloned method and tested equivalence for using...
2015-02-12 Jim ProcterJAL-1115 switch to lists in SequenceGroup
2015-02-12 Jim ProcterJAL-1115 typecast
2015-02-12 Jim Procterjavadoc
2015-02-12 Jim ProcterJAL-1115 List rather than vector for sequence groups...
2015-02-06 Jim ProcterMerge branch 'bug/JAL-1643_File-chooser-improvement...
2015-02-05 Charles Ofoegbumerge commit
2015-02-05 Jim ProcterJAL-1643 jarred up the quaqua native libraries and...
2015-02-05 Jim ProcterJAL-1643 added quaqua filechooser and jni libraries...
2015-02-05 Jim ProcterJAL-1643 correct version of quaqua (8) plus THIRDPARTYL...
2015-02-05 Jim ProcterJAL-1643 renamed quaqua library to add version number
2015-02-04 Charles OfoegbuJAL-1643 modified jalviewFileChooser to retain default...
2015-02-04 Charles OfoegbuJAL-1643 Modified JalviewFileChooser to have a more...
2015-02-02 Charles OfoegbuMerge branch 'bug/JAL-1644_Finder-logic-improvement...
2015-02-02 Charles OfoegbuJAL-1644 added null check for sequence description...
2015-02-02 Charles OfoegbuMerge commit
2015-02-02 Charles OfoegbuJAL-1644 revised Finder's implementation to use a flag...
2015-02-02 Charles OfoegbuMerge branch 'bug/JAL-1644_Finder-logic-improvement...
2015-02-02 Charles OfoegbuJAL-1644 improvment of finder logic to include the...
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